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Items: 3


The parallelism motifs of genomic data analysis.

Yelick K, Buluç A, Awan M, Azad A, Brock B, Egan R, Ekanayake S, Ellis M, Georganas E, Guidi G, Hofmeyr S, Selvitopi O, Teodoropol C, Oliker L.

Philos Trans A Math Phys Eng Sci. 2020 Mar 6;378(2166):20190394. doi: 10.1098/rsta.2019.0394. Epub 2020 Jan 20.


HipMCL: a high-performance parallel implementation of the Markov clustering algorithm for large-scale networks.

Azad A, Pavlopoulos GA, Ouzounis CA, Kyrpides NC, Buluç A.

Nucleic Acids Res. 2018 Apr 6;46(6):e33. doi: 10.1093/nar/gkx1313.


A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome.

Chapman JA, Mascher M, Buluç A, Barry K, Georganas E, Session A, Strnadova V, Jenkins J, Sehgal S, Oliker L, Schmutz J, Yelick KA, Scholz U, Waugh R, Poland JA, Muehlbauer GJ, Stein N, Rokhsar DS.

Genome Biol. 2015 Jan 31;16:26. doi: 10.1186/s13059-015-0582-8.

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