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Items: 47


Comparative transcriptome analysis in Arabidopsis ein2/ore3 and ahk3/ore12 mutants during dark-induced leaf senescence.

Kim J, Park SJ, Lee IH, Chu H, Penfold CA, Kim JH, Buchanan-Wollaston V, Nam HG, Woo HR, Lim PO.

J Exp Bot. 2018 May 25;69(12):3023-3036. doi: 10.1093/jxb/ery137.


Towards new sources of resistance to the currant-lettuce aphid (Nasonovia ribisnigri).

Walley PG, Hough G, Moore JD, Carder J, Elliott M, Mead A, Jones J, Teakle G, Barker G, Buchanan-Wollaston V, Hand P, Pink D, Collier R.

Mol Breed. 2017;37(1):4. doi: 10.1007/s11032-016-0606-4. Epub 2017 Jan 3.


Time-Series Transcriptomics Reveals That AGAMOUS-LIKE22 Affects Primary Metabolism and Developmental Processes in Drought-Stressed Arabidopsis.

Bechtold U, Penfold CA, Jenkins DJ, Legaie R, Moore JD, Lawson T, Matthews JS, Vialet-Chabrand SR, Baxter L, Subramaniam S, Hickman R, Florance H, Sambles C, Salmon DL, Feil R, Bowden L, Hill C, Baker NR, Lunn JE, Finkenstädt B, Mead A, Buchanan-Wollaston V, Beynon J, Rand DA, Wild DL, Denby KJ, Ott S, Smirnoff N, Mullineaux PM.

Plant Cell. 2016 Feb;28(2):345-66. doi: 10.1105/tpc.15.00910. Epub 2016 Feb 3.


Transcriptional Dynamics Driving MAMP-Triggered Immunity and Pathogen Effector-Mediated Immunosuppression in Arabidopsis Leaves Following Infection with Pseudomonas syringae pv tomato DC3000.

Lewis LA, Polanski K, de Torres-Zabala M, Jayaraman S, Bowden L, Moore J, Penfold CA, Jenkins DJ, Hill C, Baxter L, Kulasekaran S, Truman W, Littlejohn G, Prusinska J, Mead A, Steinbrenner J, Hickman R, Rand D, Wild DL, Ott S, Buchanan-Wollaston V, Smirnoff N, Beynon J, Denby K, Grant M.

Plant Cell. 2015 Nov;27(11):3038-64. doi: 10.1105/tpc.15.00471. Epub 2015 Nov 13.


Modelling transcriptional networks in leaf senescence.

Penfold CA, Buchanan-Wollaston V.

J Exp Bot. 2014 Jul;65(14):3859-73. doi: 10.1093/jxb/eru054. Epub 2014 Mar 5. Review.


Wigwams: identifying gene modules co-regulated across multiple biological conditions.

Polanski K, Rhodes J, Hill C, Zhang P, Jenkins DJ, Kiddle SJ, Jironkin A, Beynon J, Buchanan-Wollaston V, Ott S, Denby KJ.

Bioinformatics. 2014 Apr 1;30(7):962-70. doi: 10.1093/bioinformatics/btt728. Epub 2013 Dec 18.


Arabidopsis HEAT SHOCK TRANSCRIPTION FACTORA1b overexpression enhances water productivity, resistance to drought, and infection.

Bechtold U, Albihlal WS, Lawson T, Fryer MJ, Sparrow PA, Richard F, Persad R, Bowden L, Hickman R, Martin C, Beynon JL, Buchanan-Wollaston V, Baker NR, Morison JI, Schöffl F, Ott S, Mullineaux PM.

J Exp Bot. 2013 Aug;64(11):3467-81. doi: 10.1093/jxb/ert185. Epub 2013 Jul 4.


A local regulatory network around three NAC transcription factors in stress responses and senescence in Arabidopsis leaves.

Hickman R, Hill C, Penfold CA, Breeze E, Bowden L, Moore JD, Zhang P, Jackson A, Cooke E, Bewicke-Copley F, Mead A, Beynon J, Wild DL, Denby KJ, Ott S, Buchanan-Wollaston V.

Plant J. 2013 Jul;75(1):26-39. doi: 10.1111/tpj.12194. Epub 2013 May 11.


Conserved noncoding sequences highlight shared components of regulatory networks in dicotyledonous plants.

Baxter L, Jironkin A, Hickman R, Moore J, Barrington C, Krusche P, Dyer NP, Buchanan-Wollaston V, Tiskin A, Beynon J, Denby K, Ott S.

Plant Cell. 2012 Oct;24(10):3949-65. doi: 10.1105/tpc.112.103010. Epub 2012 Oct 30.


Cell specific analysis of Arabidopsis leaves using fluorescence activated cell sorting.

Grønlund JT, Eyres A, Kumar S, Buchanan-Wollaston V, Gifford ML.

J Vis Exp. 2012 Oct 4;(68). pii: 4214. doi: 10.3791/4214.


Arabidopsis defense against Botrytis cinerea: chronology and regulation deciphered by high-resolution temporal transcriptomic analysis.

Windram O, Madhou P, McHattie S, Hill C, Hickman R, Cooke E, Jenkins DJ, Penfold CA, Baxter L, Breeze E, Kiddle SJ, Rhodes J, Atwell S, Kliebenstein DJ, Kim YS, Stegle O, Borgwardt K, Zhang C, Tabrett A, Legaie R, Moore J, Finkenstadt B, Wild DL, Mead A, Rand D, Beynon J, Ott S, Buchanan-Wollaston V, Denby KJ.

Plant Cell. 2012 Sep;24(9):3530-57. doi: 10.1105/tpc.112.102046. Epub 2012 Sep 28.


Nonparametric Bayesian inference for perturbed and orthologous gene regulatory networks.

Penfold CA, Buchanan-Wollaston V, Denby KJ, Wild DL.

Bioinformatics. 2012 Jun 15;28(12):i233-41. doi: 10.1093/bioinformatics/bts222.


Perturbation of cytokinin and ethylene-signalling pathways explain the strong rooting phenotype exhibited by Arabidopsis expressing the Schizosaccharomyces pombe mitotic inducer, cdc25.

Spadafora ND, Parfitt D, Marchbank A, Li S, Bruno L, Vaughan R, Nieuwland J, Buchanan-Wollaston V, Herbert RJ, Bitonti MB, Doonan J, Albani D, Prinsen E, Francis D, Rogers HJ.

BMC Plant Biol. 2012 Mar 27;12:45. doi: 10.1186/1471-2229-12-45.


A new broccoli × broccoli immortal mapping population and framework genetic map: tools for breeders and complex trait analysis.

Walley PG, Carder J, Skipper E, Mathas E, Lynn J, Pink D, Buchanan-Wollaston V.

Theor Appl Genet. 2012 Feb;124(3):467-84. doi: 10.1007/s00122-011-1721-6. Epub 2011 Oct 30.


High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.

Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston V.

Plant Cell. 2011 Mar;23(3):873-94. doi: 10.1105/tpc.111.083345. Epub 2011 Mar 29.


A specific group of genes respond to cold dehydration stress in cut Alstroemeria flowers whereas ambient dehydration stress accelerates developmental senescence expression patterns.

Wagstaff C, Bramke I, Breeze E, Thornber S, Harrison E, Thomas B, Buchanan-Wollaston V, Stead T, Rogers H.

J Exp Bot. 2010 Jun;61(11):2905-21. doi: 10.1093/jxb/erq113. Epub 2010 May 9.


Probing the reproducibility of leaf growth and molecular phenotypes: a comparison of three Arabidopsis accessions cultivated in ten laboratories.

Massonnet C, Vile D, Fabre J, Hannah MA, Caldana C, Lisec J, Beemster GT, Meyer RC, Messerli G, Gronlund JT, Perkovic J, Wigmore E, May S, Bevan MW, Meyer C, Rubio-Díaz S, Weigel D, Micol JL, Buchanan-Wollaston V, Fiorani F, Walsh S, Rinn B, Gruissem W, Hilson P, Hennig L, Willmitzer L, Granier C.

Plant Physiol. 2010 Apr;152(4):2142-57. doi: 10.1104/pp.109.148338. Epub 2010 Mar 3.


A temporal precedence based clustering method for gene expression microarray data.

Krishna R, Li CT, Buchanan-Wollaston V.

BMC Bioinformatics. 2010 Jan 30;11:68. doi: 10.1186/1471-2105-11-68.


Temporal clustering by affinity propagation reveals transcriptional modules in Arabidopsis thaliana.

Kiddle SJ, Windram OP, McHattie S, Mead A, Beynon J, Buchanan-Wollaston V, Denby KJ, Mukherjee S.

Bioinformatics. 2010 Feb 1;26(3):355-62. doi: 10.1093/bioinformatics/btp673. Epub 2009 Dec 8.


Impact of environmental inputs on reverse-engineering approach to network structures.

Wu J, Sinfield JL, Buchanan-Wollaston V, Feng J.

BMC Syst Biol. 2009 Dec 4;3:113. doi: 10.1186/1752-0509-3-113.


Listen to genes: dealing with microarray data in the frequency domain.

Feng J, Yi D, Krishna R, Guo S, Buchanan-Wollaston V.

PLoS One. 2009;4(4):e5098. doi: 10.1371/journal.pone.0005098. Epub 2009 Apr 6.


A molecular and structural characterization of senescing Arabidopsis siliques and comparison of transcriptional profiles with senescing petals and leaves.

Wagstaff C, Yang TJ, Stead AD, Buchanan-Wollaston V, Roberts JA.

Plant J. 2009 Feb;57(4):690-705. doi: 10.1111/j.1365-313X.2008.03722.x. Epub 2008 Oct 16.


Transcriptional regulation of plant senescence: from functional genomics to systems biology.

Breeze E, Harrison E, Page T, Warner N, Shen C, Zhang C, Buchanan-Wollaston V.

Plant Biol (Stuttg). 2008 Sep;10 Suppl 1:99-109. doi: 10.1111/j.1438-8677.2008.00076.x.


A comparison of leaf and petal senescence in wallflower reveals common and distinct patterns of gene expression and physiology.

Price AM, Aros Orellana DF, Salleh FM, Stevens R, Acock R, Buchanan-Wollaston V, Stead AD, Rogers HJ.

Plant Physiol. 2008 Aug;147(4):1898-912. doi: 10.1104/pp.108.120402. Epub 2008 Jun 6.


Overexpression of a chromatin architecture-controlling AT-hook protein extends leaf longevity and increases the post-harvest storage life of plants.

Lim PO, Kim Y, Breeze E, Koo JC, Woo HR, Ryu JS, Park DH, Beynon J, Tabrett A, Buchanan-Wollaston V, Nam HG.

Plant J. 2007 Dec;52(6):1140-53. Epub 2007 Oct 30.


The molecular analysis of leaf senescence--a genomics approach.

Buchanan-Wollaston V, Earl S, Harrison E, Mathas E, Navabpour S, Page T, Pink D.

Plant Biotechnol J. 2003 Jan;1(1):3-22.


Gene expression patterns to define stages of post-harvest senescence in Alstroemeria petals.

Breeze E, Wagstaff C, Harrison E, Bramke I, Rogers H, Stead A, Thomas B, Buchanan-Wollaston V.

Plant Biotechnol J. 2004 Mar;2(2):155-68. Erratum in: Plant Biotechnol J. 2004 Nov;2(6):525.


Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.

Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.

Plant J. 2005 May;42(4):567-85.


Expression of senescence-enhanced genes in response to oxidative stress.

Navabpour S, Morris K, Allen R, Harrison E, A-H-Mackerness S, Buchanan-Wollaston V.

J Exp Bot. 2003 Oct;54(391):2285-92. Epub 2003 Aug 28.


Senescence and cell death in Brassica napus and Arabidopsis.

Buchanan-Wollaston V, Morris K.

Symp Soc Exp Biol. 2000;52:163-74. Review. No abstract available.


Molecular and biochemical characterization of postharvest senescence in broccoli.

Page T, Griffiths G, Buchanan-Wollaston V.

Plant Physiol. 2001 Feb;125(2):718-27.


Salicylic acid has a role in regulating gene expression during leaf senescence.

Morris K, MacKerness SA, Page T, John CF, Murphy AM, Carr JP, Buchanan-Wollaston V.

Plant J. 2000 Sep;23(5):677-85.


Differential expression of a senescence-enhanced metallothionein gene in Arabidopsis in response to isolates of Peronospora parasitica and Pseudomonas syringae.

Butt A, Mousley C, Morris K, Beynon J, Can C, Holub E, Greenberg JT, Buchanan-Wollaston V.

Plant J. 1998 Oct;16(2):209-21.


Sex determination in plants.

Ainsworth C, Parker J, Buchanan-Wollaston V.

Curr Top Dev Biol. 1998;38:167-223. Review.


Leaf senescence in Brassica napus: cloning of senescence related genes by subtractive hybridisation.

Buchanan-Wollaston V, Ainsworth C.

Plant Mol Biol. 1997 Mar;33(5):821-34.


Leaf senescence in Brassica napus: expression of genes encoding pathogenesis-related proteins.

Hanfrey C, Fife M, Buchanan-Wollaston V.

Plant Mol Biol. 1996 Feb;30(3):597-609.


Male and female flowers of the dioecious plant sorrel show different patterns of MADS box gene expression.

Ainsworth C, Crossley S, Buchanan-Wollaston V, Thangavelu M, Parker J.

Plant Cell. 1995 Oct;7(10):1583-98.


Nucleotide sequence of a cDNA clone from broccoli with high identity with the PSST subunit of NADH:ubiquinone oxidoreductase.

Pogson BJ, Downs CG, Davies KM, Morris SC, Buchanan-Wollaston V.

Plant Physiol. 1995 Jun;108(2):859-60. No abstract available.


A plant selectable marker gene based on the detoxification of the herbicide dalapon.

Buchanan-Wollaston V, Snape A, Cannon F.

Plant Cell Rep. 1992 Nov;11(12):627-31. doi: 10.1007/BF00236387.


The nucleotide sequence of the nifJ gene of Klebsiella pneumoniae.

Cannon M, Cannon F, Buchanan-Wollaston V, Ally D, Ally A, Beynon J.

Nucleic Acids Res. 1988 Dec 9;16(23):11379. No abstract available.


Parameters affecting the frequency of kanamycin resistant alfalfa obtained by Agrobacterium tumefaciens mediated transformation.

Chabaud M, Passiatore JE, Cannon F, Buchanan-Wollaston V.

Plant Cell Rep. 1988 Dec;7(7):512-6. doi: 10.1007/BF00272744.


The nucleotide sequence of the nifT, nifY, nifX and nifW genes of K. pneumoniae.

Beynon J, Cannon M, Buchanan-Wollaston V, Ally A, Setterquist R, Dean D, Cannon F.

Nucleic Acids Res. 1988 Oct 25;16(20):9860. No abstract available.


Replacement of the deoxycytidine residues in Rhizobium bacteriophage RL38JI DNA.

Swinton D, Hattman S, Benzinger R, Buchanan-Wollaston V, Beringer J.

FEBS Lett. 1985 May 20;184(2):294-8.


The nif promoters of Klebsiella pneumoniae have a characteristic primary structure.

Beynon J, Cannon M, Buchanan-Wollaston V, Cannon F.

Cell. 1983 Sep;34(2):665-71.


Role of the nifA gene product in the regulation of nif expression in Klebsiella pneumoniae.

Buchanan-Wollaston V, Cannon MC, Beynon JL, Cannon FC.

Nature. 1981 Dec 24;294(5843):776-8. No abstract available.


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