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Items: 1 to 50 of 113

1.

Salt-inducible kinase 1 maintains HDAC7 stability to promote pathologic cardiac remodeling.

Hsu A, Duan Q, McMahon S, Huang Y, Wood SA, Gray NS, Wang B, Bruneau BG, Haldar SM.

J Clin Invest. 2020 Feb 27. pii: 133753. doi: 10.1172/JCI133753. [Epub ahead of print]

2.

Minimal in vivo requirements for developmentally regulated cardiac long intergenic non-coding RNAs.

George MR, Duan Q, Nagle A, Kathiriya IS, Huang Y, Rao K, Haldar SM, Bruneau BG.

Development. 2019 Dec 9;146(23). pii: dev185314. doi: 10.1242/dev.185314.

PMID:
31784461
3.

Chromatin and epigenetics in development: a Special Issue.

Bruneau BG, Koseki H, Strome S, Torres-Padilla ME.

Development. 2019 Oct 10;146(19). pii: dev185025. doi: 10.1242/dev.185025. No abstract available.

PMID:
31601561
4.

CTCF confers local nucleosome resiliency after DNA replication and during mitosis.

Owens N, Papadopoulou T, Festuccia N, Tachtsidi A, Gonzalez I, Dubois A, Vandormael-Pournin S, Nora EP, Bruneau BG, Cohen-Tannoudji M, Navarro P.

Elife. 2019 Oct 10;8. pii: e47898. doi: 10.7554/eLife.47898.

5.

RNA Interactions Are Essential for CTCF-Mediated Genome Organization.

Saldaña-Meyer R, Rodriguez-Hernaez J, Escobar T, Nishana M, Jácome-López K, Nora EP, Bruneau BG, Tsirigos A, Furlan-Magaril M, Skok J, Reinberg D.

Mol Cell. 2019 Nov 7;76(3):412-422.e5. doi: 10.1016/j.molcel.2019.08.015. Epub 2019 Sep 12.

PMID:
31522988
6.

Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards.

Lind AL, Lai YYY, Mostovoy Y, Holloway AK, Iannucci A, Mak ACY, Fondi M, Orlandini V, Eckalbar WL, Milan M, Rovatsos M, Kichigin IG, Makunin AI, Johnson Pokorná M, Altmanová M, Trifonov VA, Schijlen E, Kratochvíl L, Fani R, Velenský P, Rehák I, Patarnello T, Jessop TS, Hicks JW, Ryder OA, Mendelson JR 3rd, Ciofi C, Kwok PY, Pollard KS, Bruneau BG.

Nat Ecol Evol. 2019 Aug;3(8):1241-1252. doi: 10.1038/s41559-019-0945-8. Epub 2019 Jul 29.

7.

Dynamic BAF chromatin remodeling complex subunit inclusion promotes temporally distinct gene expression programs in cardiogenesis.

Hota SK, Johnson JR, Verschueren E, Thomas R, Blotnick AM, Zhu Y, Sun X, Pennacchio LA, Krogan NJ, Bruneau BG.

Development. 2019 Jul 5;146(19). pii: dev174086. doi: 10.1242/dev.174086.

8.

A De Novo Shape Motif Discovery Algorithm Reveals Preferences of Transcription Factors for DNA Shape Beyond Sequence Motifs.

Samee MAH, Bruneau BG, Pollard KS.

Cell Syst. 2019 Jan 23;8(1):27-42.e6. doi: 10.1016/j.cels.2018.12.001. Epub 2019 Jan 16.

9.

Identifying cis Elements for Spatiotemporal Control of Mammalian DNA Replication.

Sima J, Chakraborty A, Dileep V, Michalski M, Klein KN, Holcomb NP, Turner JL, Paulsen MT, Rivera-Mulia JC, Trevilla-Garcia C, Bartlett DA, Zhao PA, Washburn BK, Nora EP, Kraft K, Mundlos S, Bruneau BG, Ljungman M, Fraser P, Ay F, Gilbert DM.

Cell. 2019 Feb 7;176(4):816-830.e18. doi: 10.1016/j.cell.2018.11.036. Epub 2018 Dec 27.

10.

Heart enhancers with deeply conserved regulatory activity are established early in zebrafish development.

Yuan X, Song M, Devine P, Bruneau BG, Scott IC, Wilson MD.

Nat Commun. 2018 Nov 26;9(1):4977. doi: 10.1038/s41467-018-07451-z.

11.

Chromatin Domains Go on Repeat in Disease.

Bruneau BG, Nora EP.

Cell. 2018 Sep 20;175(1):38-40. doi: 10.1016/j.cell.2018.08.068.

12.

A novel reporter allele for monitoring Dll4 expression within the embryonic and adult mouse.

Herman AM, Rhyner AM, Devine WP, Marrelli SP, Bruneau BG, Wythe JD.

Biol Open. 2018 Mar 12;7(3). pii: bio026799. doi: 10.1242/bio.026799.

13.

Cardiac-enriched BAF chromatin-remodeling complex subunit Baf60c regulates gene expression programs essential for heart development and function.

Sun X, Hota SK, Zhou YQ, Novak S, Miguel-Perez D, Christodoulou D, Seidman CE, Seidman JG, Gregorio CC, Henkelman RM, Rossant J, Bruneau BG.

Biol Open. 2018 Jan 5;7(1). pii: bio029512. doi: 10.1242/bio.029512.

14.

Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization.

Nora EP, Goloborodko A, Valton AL, Gibcus JH, Uebersohn A, Abdennur N, Dekker J, Mirny LA, Bruneau BG.

Cell. 2017 May 18;169(5):930-944.e22. doi: 10.1016/j.cell.2017.05.004.

15.

Cooperative activation of cardiac transcription through myocardin bridging of paired MEF2 sites.

Anderson CM, Hu J, Thomas R, Gainous TB, Celona B, Sinha T, Dickel DE, Heidt AB, Xu SM, Bruneau BG, Pollard KS, Pennacchio LA, Black BL.

Development. 2017 Apr 1;144(7):1235-1241. doi: 10.1242/dev.138487.

16.

Single-Cell Resolution of Temporal Gene Expression during Heart Development.

DeLaughter DM, Bick AG, Wakimoto H, McKean D, Gorham JM, Kathiriya IS, Hinson JT, Homsy J, Gray J, Pu W, Bruneau BG, Seidman JG, Seidman CE.

Dev Cell. 2016 Nov 21;39(4):480-490. doi: 10.1016/j.devcel.2016.10.001. Epub 2016 Nov 10.

17.

ATP-dependent chromatin remodeling during mammalian development.

Hota SK, Bruneau BG.

Development. 2016 Aug 15;143(16):2882-97. doi: 10.1242/dev.128892. Review.

18.

Loss of Iroquois homeobox transcription factors 3 and 5 in osteoblasts disrupts cranial mineralization.

Cain CJ, Gaborit N, Lwin W, Barruet E, Ho S, Bonnard C, Hamamy H, Shboul M, Reversade B, Kayserili H, Bruneau BG, Hsiao EC.

Bone Rep. 2016 Apr 13;5:86-95. doi: 10.1016/j.bonr.2016.02.005. eCollection 2016 Dec.

19.

Expandable Cardiovascular Progenitor Cells Reprogrammed from Fibroblasts.

Zhang Y, Cao N, Huang Y, Spencer CI, Fu JD, Yu C, Liu K, Nie B, Xu T, Li K, Xu S, Bruneau BG, Srivastava D, Ding S.

Cell Stem Cell. 2016 Mar 3;18(3):368-81. doi: 10.1016/j.stem.2016.02.001.

20.

KMT2D regulates specific programs in heart development via histone H3 lysine 4 di-methylation.

Ang SY, Uebersohn A, Spencer CI, Huang Y, Lee JE, Ge K, Bruneau BG.

Development. 2016 Mar 1;143(5):810-21. doi: 10.1242/dev.132688.

21.

Complex Interdependence Regulates Heterotypic Transcription Factor Distribution and Coordinates Cardiogenesis.

Luna-Zurita L, Stirnimann CU, Glatt S, Kaynak BL, Thomas S, Baudin F, Samee MA, He D, Small EM, Mileikovsky M, Nagy A, Holloway AK, Pollard KS, Müller CW, Bruneau BG.

Cell. 2016 Feb 25;164(5):999-1014. doi: 10.1016/j.cell.2016.01.004. Epub 2016 Feb 11.

22.

Accelerated Evolution of Enhancer Hotspots in the Mammal Ancestor.

Holloway AK, Bruneau BG, Sukonnik T, Rubenstein JL, Pollard KS.

Mol Biol Evol. 2016 Apr;33(4):1008-18. doi: 10.1093/molbev/msv344. Epub 2015 Dec 29.

23.

Polycomb Regulates Mesoderm Cell Fate-Specification in Embryonic Stem Cells through Activation and Repression Mechanisms.

Morey L, Santanach A, Blanco E, Aloia L, Nora EP, Bruneau BG, Di Croce L.

Cell Stem Cell. 2015 Sep 3;17(3):300-15. doi: 10.1016/j.stem.2015.08.009.

24.

Evolution of lysine acetylation in the RNA polymerase II C-terminal domain.

Simonti CN, Pollard KS, Schröder S, He D, Bruneau BG, Ott M, Capra JA.

BMC Evol Biol. 2015 Mar 10;15:35. doi: 10.1186/s12862-015-0327-z.

25.

Brg1 modulates enhancer activation in mesoderm lineage commitment.

Alexander JM, Hota SK, He D, Thomas S, Ho L, Pennacchio LA, Bruneau BG.

Development. 2015 Apr 15;142(8):1418-30. doi: 10.1242/dev.109496. Epub 2015 Mar 26.

26.

Human disease modeling reveals integrated transcriptional and epigenetic mechanisms of NOTCH1 haploinsufficiency.

Theodoris CV, Li M, White MP, Liu L, He D, Pollard KS, Bruneau BG, Srivastava D.

Cell. 2015 Mar 12;160(6):1072-86. doi: 10.1016/j.cell.2015.02.035.

27.

Investigating the transcriptional control of cardiovascular development.

Kathiriya IS, Nora EP, Bruneau BG.

Circ Res. 2015 Feb 13;116(4):700-14. doi: 10.1161/CIRCRESAHA.116.302832. Review.

28.

Ezh2-mediated repression of a transcriptional pathway upstream of Mmp9 maintains integrity of the developing vasculature.

Delgado-Olguín P, Dang LT, He D, Thomas S, Chi L, Sukonnik T, Khyzha N, Dobenecker MW, Fish JE, Bruneau BG.

Development. 2014 Dec;141(23):4610-7. doi: 10.1242/dev.112607. Epub 2014 Oct 30.

29.

Early patterning and specification of cardiac progenitors in gastrulating mesoderm.

Devine WP, Wythe JD, George M, Koshiba-Takeuchi K, Bruneau BG.

Elife. 2014 Oct 8;3. doi: 10.7554/eLife.03848.

30.

Finding a niche for cardiac precursors.

Bruneau BG.

Elife. 2014 May 6;3:e02993. doi: 10.7554/eLife.02993.

31.

HDAC-regulated myomiRs control BAF60 variant exchange and direct the functional phenotype of fibro-adipogenic progenitors in dystrophic muscles.

Saccone V, Consalvi S, Giordani L, Mozzetta C, Barozzi I, Sandoná M, Ryan T, Rojas-Muñoz A, Madaro L, Fasanaro P, Borsellino G, De Bardi M, Frigè G, Termanini A, Sun X, Rossant J, Bruneau BG, Mercola M, Minucci S, Puri PL.

Genes Dev. 2014 Apr 15;28(8):841-57. doi: 10.1101/gad.234468.113. Epub 2014 Mar 28.

32.

Function-based identification of mammalian enhancers using site-specific integration.

Dickel DE, Zhu Y, Nord AS, Wylie JN, Akiyama JA, Afzal V, Plajzer-Frick I, Kirkpatrick A, Göttgens B, Bruneau BG, Visel A, Pennacchio LA.

Nat Methods. 2014 May;11(5):566-71. doi: 10.1038/nmeth.2886. Epub 2014 Mar 23.

33.

Congenital heart disease: entering a new era of human genetics.

Bruneau BG, Srivastava D.

Circ Res. 2014 Feb 14;114(4):598-9. doi: 10.1161/CIRCRESAHA.113.303060.

PMID:
24526674
34.

Direct reprogramming of human fibroblasts toward a cardiomyocyte-like state.

Fu JD, Stone NR, Liu L, Spencer CI, Qian L, Hayashi Y, Delgado-Olguin P, Ding S, Bruneau BG, Srivastava D.

Stem Cell Reports. 2013 Aug 22;1(3):235-47. doi: 10.1016/j.stemcr.2013.07.005. eCollection 2013.

35.

Acetylation of RNA polymerase II regulates growth-factor-induced gene transcription in mammalian cells.

Schröder S, Herker E, Itzen F, He D, Thomas S, Gilchrist DA, Kaehlcke K, Cho S, Pollard KS, Capra JA, Schnölzer M, Cole PA, Geyer M, Bruneau BG, Adelman K, Ott M.

Mol Cell. 2013 Nov 7;52(3):314-24. doi: 10.1016/j.molcel.2013.10.009.

36.

Chromatin modulators as facilitating factors in cellular reprogramming.

Luna-Zurita L, Bruneau BG.

Curr Opin Genet Dev. 2013 Oct;23(5):556-61. doi: 10.1016/j.gde.2013.07.002. Epub 2013 Aug 28. Review.

PMID:
23993229
37.

ETS factors regulate Vegf-dependent arterial specification.

Wythe JD, Dang LT, Devine WP, Boudreau E, Artap ST, He D, Schachterle W, Stainier DY, Oettgen P, Black BL, Bruneau BG, Fish JE.

Dev Cell. 2013 Jul 15;26(1):45-58. doi: 10.1016/j.devcel.2013.06.007. Epub 2013 Jul 3.

38.

The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage.

Shaffer HB, Minx P, Warren DE, Shedlock AM, Thomson RC, Valenzuela N, Abramyan J, Amemiya CT, Badenhorst D, Biggar KK, Borchert GM, Botka CW, Bowden RM, Braun EL, Bronikowski AM, Bruneau BG, Buck LT, Capel B, Castoe TA, Czerwinski M, Delehaunty KD, Edwards SV, Fronick CC, Fujita MK, Fulton L, Graves TA, Green RE, Haerty W, Hariharan R, Hernandez O, Hillier LW, Holloway AK, Janes D, Janzen FJ, Kandoth C, Kong L, de Koning AP, Li Y, Literman R, McGaugh SE, Mork L, O'Laughlin M, Paitz RT, Pollock DD, Ponting CP, Radhakrishnan S, Raney BJ, Richman JM, St John J, Schwartz T, Sethuraman A, Spinks PQ, Storey KB, Thane N, Vinar T, Zimmerman LM, Warren WC, Mardis ER, Wilson RK.

Genome Biol. 2013 Mar 28;14(3):R28. doi: 10.1186/gb-2013-14-3-r28.

39.

Signaling and transcriptional networks in heart development and regeneration.

Bruneau BG.

Cold Spring Harb Perspect Biol. 2013 Mar 1;5(3):a008292. doi: 10.1101/cshperspect.a008292. Review.

40.

Regulation of retinal interneuron subtype identity by the Iroquois homeobox gene Irx6.

Star EN, Zhu M, Shi Z, Liu H, Pashmforoush M, Sauve Y, Bruneau BG, Chow RL.

Development. 2012 Dec;139(24):4644-55. doi: 10.1242/dev.081729.

41.

Cooperative and antagonistic roles for Irx3 and Irx5 in cardiac morphogenesis and postnatal physiology.

Gaborit N, Sakuma R, Wylie JN, Kim KH, Zhang SS, Hui CC, Bruneau BG.

Development. 2012 Nov;139(21):4007-19. doi: 10.1242/dev.081703. Epub 2012 Sep 19.

42.

Dynamic and coordinated epigenetic regulation of developmental transitions in the cardiac lineage.

Wamstad JA, Alexander JM, Truty RM, Shrikumar A, Li F, Eilertson KE, Ding H, Wylie JN, Pico AR, Capra JA, Erwin G, Kattman SJ, Keller GM, Srivastava D, Levine SS, Pollard KS, Holloway AK, Boyer LA, Bruneau BG.

Cell. 2012 Sep 28;151(1):206-20. doi: 10.1016/j.cell.2012.07.035. Epub 2012 Sep 12.

43.

Iroquois homeodomain transcription factors in heart development and function.

Kim KH, Rosen A, Bruneau BG, Hui CC, Backx PH.

Circ Res. 2012 May 25;110(11):1513-24. doi: 10.1161/CIRCRESAHA.112.265041. Review.

PMID:
22628575
44.

Direct reprogramming for cardiac regeneration: from dream to reality.

Bruneau BG.

Circ Res. 2012 May 25;110(11):1392-4. doi: 10.1161/CIRCRESAHA.112.270637. No abstract available.

45.

The development of the embryonic heart. Preface.

Bruneau BG.

Curr Top Dev Biol. 2012;100:xv-xvi. doi: 10.1016/B978-0-12-387786-4.00018-X. No abstract available.

PMID:
22449850
46.

Epigenetic repression of cardiac progenitor gene expression by Ezh2 is required for postnatal cardiac homeostasis.

Delgado-Olguín P, Huang Y, Li X, Christodoulou D, Seidman CE, Seidman JG, Tarakhovsky A, Bruneau BG.

Nat Genet. 2012 Jan 22;44(3):343-7. doi: 10.1038/ng.1068.

47.

Epigenetics and cardiovascular development.

Chang CP, Bruneau BG.

Annu Rev Physiol. 2012;74:41-68. doi: 10.1146/annurev-physiol-020911-153242. Epub 2011 Oct 24. Review.

PMID:
22035349
48.

Iroquois homeobox gene 3 establishes fast conduction in the cardiac His-Purkinje network.

Zhang SS, Kim KH, Rosen A, Smyth JW, Sakuma R, Delgado-Olguín P, Davis M, Chi NC, Puviindran V, Gaborit N, Sukonnik T, Wylie JN, Brand-Arzamendi K, Farman GP, Kim J, Rose RA, Marsden PA, Zhu Y, Zhou YQ, Miquerol L, Henkelman RM, Stainier DY, Shaw RM, Hui CC, Bruneau BG, Backx PH.

Proc Natl Acad Sci U S A. 2011 Aug 16;108(33):13576-81. doi: 10.1073/pnas.1106911108. Epub 2011 Aug 8.

49.

Atrial natriuretic factor in the developing heart: a signpost for cardiac morphogenesis.

Bruneau BG.

Can J Physiol Pharmacol. 2011 Aug;89(8):533-7. doi: 10.1139/y11-051. Epub 2011 Aug 2. Review.

PMID:
21806510
50.

Ezh2 regulates anteroposterior axis specification and proximodistal axis elongation in the developing limb.

Wyngaarden LA, Delgado-Olguin P, Su IH, Bruneau BG, Hopyan S.

Development. 2011 Sep;138(17):3759-67. doi: 10.1242/dev.063180. Epub 2011 Jul 27.

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