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Selection and assembly of indigenous bacteria and methanogens from spent metalworking fluids and their potential as a starting culture in a fluidized bed reactor.

Vyrides I, Rivett DW, Bruce KD, Lilley AK.

Microb Biotechnol. 2019 Jul 21. doi: 10.1111/1751-7915.13448. [Epub ahead of print]


Current Models of Fatty Liver Disease; New Insights, Therapeutic Targets and Interventions.

Jonscher KR, Bruce KD.

Adv Exp Med Biol. 2019;1134:33-58. doi: 10.1007/978-3-030-12668-1_3. Review.


Circadian leaf movements facilitate overtopping of neighbors.

Woodley Of Menie MA, Pawlik P, Webb MT, Bruce KD, Devlin PF.

Prog Biophys Mol Biol. 2019 Sep;146:104-111. doi: 10.1016/j.pbiomolbio.2018.12.012. Epub 2018 Dec 28.


Self-Limiting versus Conventional Caries Removal: A Randomized Clinical Trial.

Ali AH, Koller G, Foschi F, Andiappan M, Bruce KD, Banerjee A, Mannocci F.

J Dent Res. 2018 Oct;97(11):1207-1213. doi: 10.1177/0022034518769255. Epub 2018 May 8.


Lipoprotein Lipase Is a Feature of Alternatively-Activated Microglia and May Facilitate Lipid Uptake in the CNS During Demyelination.

Bruce KD, Gorkhali S, Given K, Coates AM, Boyle KE, Macklin WB, Eckel RH.

Front Mol Neurosci. 2018 Mar 15;11:57. doi: 10.3389/fnmol.2018.00057. eCollection 2018.


Assessment of Fatty Liver in Models of Disease Programming.

Bruce KD, Jonscher KR.

Methods Mol Biol. 2018;1735:251-266. doi: 10.1007/978-1-4939-7614-0_15.


Clinical and symptom scores are significantly correlated with fecal microbiota features in patients with symptomatic uncomplicated diverticular disease: a pilot study.

Kvasnovsky CL, Leong LEX, Choo JM, Abell GCJ, Papagrigoriadis S, Bruce KD, Rogers GB.

Eur J Gastroenterol Hepatol. 2018 Jan;30(1):107-112. doi: 10.1097/MEG.0000000000000995.


The 4E-BP growth pathway regulates the effect of ambient temperature on Drosophila metabolism and lifespan.

Carvalho GB, Drago I, Hoxha S, Yamada R, Mahneva O, Bruce KD, Soto Obando A, Conti B, Ja WW.

Proc Natl Acad Sci U S A. 2017 Sep 5;114(36):9737-9742. doi: 10.1073/pnas.1618994114. Epub 2017 Aug 21.


How can the cystic fibrosis respiratory microbiome influence our clinical decision-making?

Rogers GB, Bruce KD, Hoffman LR.

Curr Opin Pulm Med. 2017 Nov;23(6):536-543. doi: 10.1097/MCP.0000000000000419. Review.


Low-Dose Nitric Oxide as Targeted Anti-biofilm Adjunctive Therapy to Treat Chronic Pseudomonas aeruginosa Infection in Cystic Fibrosis.

Howlin RP, Cathie K, Hall-Stoodley L, Cornelius V, Duignan C, Allan RN, Fernandez BO, Barraud N, Bruce KD, Jefferies J, Kelso M, Kjelleberg S, Rice SA, Rogers GB, Pink S, Smith C, Sukhtankar PS, Salib R, Legg J, Carroll M, Daniels T, Feelisch M, Stoodley P, Clarke SC, Connett G, Faust SN, Webb JS.

Mol Ther. 2017 Sep 6;25(9):2104-2116. doi: 10.1016/j.ymthe.2017.06.021. Epub 2017 Jul 24.


Lipoprotein lipase in hypothalamus is a key regulator of body weight gain and glucose homeostasis in mice.

Laperrousaz E, Moullé VS, Denis RG, Kassis N, Berland C, Colsch B, Fioramonti X, Philippe E, Lacombe A, Vanacker C, Butin N, Bruce KD, Wang H, Wang Y, Gao Y, Garcia-Caceres C, Prévot V, Tschöp MH, Eckel RH, Le Stunff H, Luquet S, Magnan C, Cruciani-Guglielmacci C.

Diabetologia. 2017 Jul;60(7):1314-1324. doi: 10.1007/s00125-017-4282-7. Epub 2017 Apr 29.


Contributions of Composition and Interactions to Bacterial Respiration Are Reliant on the Phylogenetic Similarity of the Measured Community.

Rivett DW, Lilley AK, Connett GJ, Carroll MP, Legg JP, Bruce KD.

Microb Ecol. 2017 Oct;74(3):757-760. doi: 10.1007/s00248-017-0982-2. Epub 2017 Apr 27.


Lipid Processing in the Brain: A Key Regulator of Systemic Metabolism.

Bruce KD, Zsombok A, Eckel RH.

Front Endocrinol (Lausanne). 2017 Apr 4;8:60. doi: 10.3389/fendo.2017.00060. eCollection 2017. Review.


Divergent Relationships between Fecal Microbiota and Metabolome following Distinct Antibiotic-Induced Disruptions.

Choo JM, Kanno T, Zain NM, Leong LE, Abell GC, Keeble JE, Bruce KD, Mason AJ, Rogers GB.

mSphere. 2017 Feb 8;2(1). pii: e00005-17. doi: 10.1128/mSphere.00005-17. eCollection 2017 Jan-Feb.


Hyperlipidaemia alone and in combination with acidosis can increase the incidence and severity of statin-induced myotoxicity.

Taha DA, Zgair A, Lee JB, de Moor CH, Barrett DA, Bruce KD, Sungelo M, Eckel RH, Gershkovich P.

Eur J Pharm Sci. 2017 Mar 30;100:163-175. doi: 10.1016/j.ejps.2017.01.018. Epub 2017 Jan 16.


Altered cellular redox status, sirtuin abundance and clock gene expression in a mouse model of developmentally primed NASH.

Bruce KD, Szczepankiewicz D, Sihota KK, Ravindraanandan M, Thomas H, Lillycrop KA, Burdge GC, Hanson MA, Byrne CD, Cagampang FR.

Biochim Biophys Acta. 2016 Jul;1861(7):584-93. doi: 10.1016/j.bbalip.2016.03.026. Epub 2016 Apr 23.


Respiratory microbiota resistance and resilience to pulmonary exacerbation and subsequent antimicrobial intervention.

Cuthbertson L, Rogers GB, Walker AW, Oliver A, Green LE, Daniels TW, Carroll MP, Parkhill J, Bruce KD, van der Gast CJ.

ISME J. 2016 May;10(5):1081-91. doi: 10.1038/ismej.2015.198. Epub 2015 Nov 10.


Republished: Respiratory microbiota: addressing clinical questions, informing clinical practice.

Rogers GB, Shaw D, Marsh RL, Carroll MP, Serisier DJ, Bruce KD.

Postgrad Med J. 2015 Aug;91(1078):463-70. doi: 10.1136/postgradmedj-2014-205826rep. Review.


Corrections. The effect of long-term macrolide treatment on respiratory microbiota composition in non-cystic fibrosis bronchiectasis: an analysis from the randomised, double-blind, placebo-controlled BLESS trial.

Rogers GB, Bruce KD, Martin ML, Burr LD, Serisier DJ.

Lancet Respir Med. 2015 Apr;3(4):e15. doi: 10.1016/S2213-2600(15)00102-2. Epub 2015 Mar 17. No abstract available.


Microbes Promote Amino Acid Harvest to Rescue Undernutrition in Drosophila.

Yamada R, Deshpande SA, Bruce KD, Mak EM, Ja WW.

Cell Rep. 2015 Feb 17;10(6):865-872. doi: 10.1016/j.celrep.2015.01.018. Epub 2015 Feb 13.


Environmentally determined differences in the murine lung microbiota and their relation to alveolar architecture.

Yun Y, Srinivas G, Kuenzel S, Linnenbrink M, Alnahas S, Bruce KD, Steinhoff U, Baines JF, Schaible UE.

PLoS One. 2014 Dec 3;9(12):e113466. doi: 10.1371/journal.pone.0113466. eCollection 2014.


Implications of multiple freeze-thawing on respiratory samples for culture-independent analyses.

Cuthbertson L, Rogers GB, Walker AW, Oliver A, Hoffman LR, Carroll MP, Parkhill J, Bruce KD, van der Gast CJ.

J Cyst Fibros. 2015 Jul;14(4):464-7. doi: 10.1016/j.jcf.2014.10.004. Epub 2014 Oct 24.


The effect of long-term macrolide treatment on respiratory microbiota composition in non-cystic fibrosis bronchiectasis: an analysis from the randomised, double-blind, placebo-controlled BLESS trial.

Rogers GB, Bruce KD, Martin ML, Burr LD, Serisier DJ.

Lancet Respir Med. 2014 Dec;2(12):988-96. doi: 10.1016/S2213-2600(14)70213-9. Epub 2014 Oct 14. Erratum in: Lancet Respir Med. 2015 Apr;3(4):e15.


Diet-induced maternal obesity alters ovarian morphology and gene expression in the adult mouse offspring.

Cheong Y, Sadek KH, Bruce KD, Macklon N, Cagampang FR.

Fertil Steril. 2014 Sep;102(3):899-907. doi: 10.1016/j.fertnstert.2014.06.015. Epub 2014 Jul 22.


Respiratory microbiota: addressing clinical questions, informing clinical practice.

Rogers GB, Shaw D, Marsh RL, Carroll MP, Serisier DJ, Bruce KD.

Thorax. 2015 Jan;70(1):74-81. doi: 10.1136/thoraxjnl-2014-205826. Epub 2014 Jul 17. Review.


Functional divergence in gastrointestinal microbiota in physically-separated genetically identical mice.

Rogers GB, Kozlowska J, Keeble J, Metcalfe K, Fao M, Dowd SE, Mason AJ, McGuckin MA, Bruce KD.

Sci Rep. 2014 Jun 25;4:5437. doi: 10.1038/srep05437.


Potentially pathogenic airway bacteria and neutrophilic inflammation in treatment resistant severe asthma.

Green BJ, Wiriyachaiporn S, Grainge C, Rogers GB, Kehagia V, Lau L, Carroll MP, Bruce KD, Howarth PH.

PLoS One. 2014 Jun 23;9(6):e100645. doi: 10.1371/journal.pone.0100645. eCollection 2014.


Time between collection and storage significantly influences bacterial sequence composition in sputum samples from cystic fibrosis respiratory infections.

Cuthbertson L, Rogers GB, Walker AW, Oliver A, Hafiz T, Hoffman LR, Carroll MP, Parkhill J, Bruce KD, van der Gast CJ.

J Clin Microbiol. 2014 Aug;52(8):3011-6. doi: 10.1128/JCM.00764-14. Epub 2014 Jun 11.


Sensitivity of housekeeping genes in the suprachiasmatic nucleus of the mouse brain to diet and the daily light-dark cycle.

Cleal JK, Shepherd JN, Shearer JL, Bruce KD, Cagampang FR.

Brain Res. 2014 Aug 5;1575:72-7. doi: 10.1016/j.brainres.2014.05.031. Epub 2014 Jun 2.


Combined systems approaches reveal highly plastic responses to antimicrobial peptide challenge in Escherichia coli.

Kozlowska J, Vermeer LS, Rogers GB, Rehnnuma N, Amos SB, Koller G, McArthur M, Bruce KD, Mason AJ.

PLoS Pathog. 2014 May 1;10(5):e1004104. doi: 10.1371/journal.ppat.1004104. eCollection 2014 May.


Three clinically distinct chronic pediatric airway infections share a common core microbiota.

van der Gast CJ, Cuthbertson L, Rogers GB, Pope C, Marsh RL, Redding GJ, Bruce KD, Chang AB, Hoffman LR.

Ann Am Thorac Soc. 2014 Sep;11(7):1039-48. doi: 10.1513/AnnalsATS.201312-456OC.


A novel microbiota stratification system predicts future exacerbations in bronchiectasis.

Rogers GB, Zain NM, Bruce KD, Burr LD, Chen AC, Rivett DW, McGuckin MA, Serisier DJ.

Ann Am Thorac Soc. 2014 May;11(4):496-503. doi: 10.1513/AnnalsATS.201310-335OC.


A relationship between Pseudomonal growth behaviour and cystic fibrosis patient lung function identified in a metabolomic investigation.

Kozlowska J, Rivett DW, Vermeer LS, Carroll MP, Bruce KD, Mason AJ, Rogers GB.

Metabolomics. 2013 Dec;9(6). doi: 10.1007/s11306-013-0538-5.


Maternal and in utero determinants of type 2 diabetes risk in the young.

Bruce KD.

Curr Diab Rep. 2014 Jan;14(1):446. doi: 10.1007/s11892-013-0446-0. Review.


The impact of azithromycin therapy on the airway microbiota in asthma.

Slater M, Rivett DW, Williams L, Martin M, Harrison T, Sayers I, Bruce KD, Shaw D.

Thorax. 2014 Jul;69(7):673-4. doi: 10.1136/thoraxjnl-2013-204517. Epub 2013 Nov 28. No abstract available.


Ascitic microbiota composition is correlated with clinical severity in cirrhosis with portal hypertension.

Rogers GB, van der Gast CJ, Bruce KD, Marsh P, Collins JE, Sutton J, Wright M.

PLoS One. 2013 Sep 25;8(9):e74884. doi: 10.1371/journal.pone.0074884. eCollection 2013.


Complexity, temporal stability, and clinical correlates of airway bacterial community composition in primary ciliary dyskinesia.

Rogers GB, Carroll MP, Zain NM, Bruce KD, Lock K, Walker W, Jones G, Daniels TW, Lucas JS.

J Clin Microbiol. 2013 Dec;51(12):4029-35. doi: 10.1128/JCM.02164-13. Epub 2013 Sep 25.


Challenges and opportunities for faecal microbiota transplantation therapy.

Rogers GB, Bruce KD.

Epidemiol Infect. 2013 Nov;141(11):2235-42. doi: 10.1017/S0950268813001362. Epub 2013 Jun 5. Review.


Staphylococcus aureus small-colony variants are independently associated with worse lung disease in children with cystic fibrosis.

Wolter DJ, Emerson JC, McNamara S, Buccat AM, Qin X, Cochrane E, Houston LS, Rogers GB, Marsh P, Prehar K, Pope CE, Blackledge M, Déziel E, Bruce KD, Ramsey BW, Gibson RL, Burns JL, Hoffman LR.

Clin Infect Dis. 2013 Aug;57(3):384-91. doi: 10.1093/cid/cit270. Epub 2013 Apr 26.


Interpreting infective microbiota: the importance of an ecological perspective.

Rogers GB, Hoffman LR, Carroll MP, Bruce KD.

Trends Microbiol. 2013 Jun;21(6):271-6. doi: 10.1016/j.tim.2013.03.004. Epub 2013 Apr 16.


Is there an association between microbial exposure and food allergy? A systematic review.

Marrs T, Bruce KD, Logan K, Rivett DW, Perkin MR, Lack G, Flohr C.

Pediatr Allergy Immunol. 2013 Jun;24(4):311-320.e8. doi: 10.1111/pai.12064. Epub 2013 Apr 11. Review.


Clinical measures of disease in adult non-CF bronchiectasis correlate with airway microbiota composition.

Rogers GB, van der Gast CJ, Cuthbertson L, Thomson SK, Bruce KD, Martin ML, Serisier DJ.

Thorax. 2013 Aug;68(8):731-7. doi: 10.1136/thoraxjnl-2012-203105. Epub 2013 Apr 6.


The cystic fibrosis airway microbiome.

Lynch SV, Bruce KD.

Cold Spring Harb Perspect Med. 2013 Mar 1;3(3):a009738. doi: 10.1101/cshperspect.a009738. Review.


High carbohydrate-low protein consumption maximizes Drosophila lifespan.

Bruce KD, Hoxha S, Carvalho GB, Yamada R, Wang HD, Karayan P, He S, Brummel T, Kapahi P, Ja WW.

Exp Gerontol. 2013 Oct;48(10):1129-35. doi: 10.1016/j.exger.2013.02.003. Epub 2013 Feb 10.


Comparison of the distal gut microbiota from people and animals in Africa.

Ellis RJ, Bruce KD, Jenkins C, Stothard JR, Ajarova L, Mugisha L, Viney ME.

PLoS One. 2013;8(1):e54783. doi: 10.1371/journal.pone.0054783. Epub 2013 Jan 23.


Interaction between maternal and offspring diet to impair vascular function and oxidative balance in high fat fed male mice.

Torrens C, Ethirajan P, Bruce KD, Cagampang FR, Siow RC, Hanson MA, Byrne CD, Mann GE, Clough GF.

PLoS One. 2012;7(12):e50671. doi: 10.1371/journal.pone.0050671. Epub 2012 Dec 5.


Reducing bias in bacterial community analysis of lower respiratory infections.

Rogers GB, Cuthbertson L, Hoffman LR, Wing PA, Pope C, Hooftman DA, Lilley AK, Oliver A, Carroll MP, Bruce KD, van der Gast CJ.

ISME J. 2013 Apr;7(4):697-706. doi: 10.1038/ismej.2012.145. Epub 2012 Nov 29.


Exploring the parallel development of microbial systems in neonates with cystic fibrosis.

Rogers GB, Bruce KD.

MBio. 2012 Nov 6;3(6):e00408-12. doi: 10.1128/mBio.00408-12.


Evaluation of a rapid lateral flow immunoassay for Staphylococcus aureus detection in respiratory samples.

Wiriyachaiporn S, Howarth PH, Bruce KD, Dailey LA.

Diagn Microbiol Infect Dis. 2013 Jan;75(1):28-36. doi: 10.1016/j.diagmicrobio.2012.09.011. Epub 2012 Oct 25.


Variation in stability of housekeeping genes in healthy and adhesion-related mesothelium.

Sadek KH, Cagampang FR, Bruce KD, Macklon N, Cheong Y.

Fertil Steril. 2012 Oct;98(4):1023-7. doi: 10.1016/j.fertnstert.2012.06.033. Epub 2012 Jul 13.


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