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Extensive subclonal mutational diversity in human colorectal cancer and its significance.

Loeb LA, Kohrn BF, Loubet-Senear KJ, Dunn YJ, Ahn EH, O'Sullivan JN, Salk JJ, Bronner MP, Beckman RA.

Proc Natl Acad Sci U S A. 2019 Dec 5. pii: 201910301. doi: 10.1073/pnas.1910301116. [Epub ahead of print]


Molecular Biomarkers of Sessile Serrated Adenoma/Polyps.

Kanth P, Boylan KE, Bronner MP, Boucher KM, Hazel MW, Yao R, Pop S, Bernard PS, Delker DA.

Clin Transl Gastroenterol. 2019 Dec;10(12):e00104. doi: 10.14309/ctg.0000000000000104.


Small RNA sequencing of sessile serrated polyps identifies microRNA profile associated with colon cancer.

Kanth P, Hazel MW, Boucher KM, Yang Z, Wang L, Bronner MP, Boylan KE, Burt RW, Westover M, Neklason DW, Delker DA.

Genes Chromosomes Cancer. 2019 Jan;58(1):23-33. doi: 10.1002/gcc.22686. Epub 2018 Nov 18.


Automated size selection for short cell-free DNA fragments enriches for circulating tumor DNA and improves error correction during next generation sequencing.

Hellwig S, Nix DA, Gligorich KM, O'Shea JM, Thomas A, Fuertes CL, Bhetariya PJ, Marth GT, Bronner MP, Underhill HR.

PLoS One. 2018 Jul 25;13(7):e0197333. doi: 10.1371/journal.pone.0197333. eCollection 2018.


Context-Dependent Requirements for FimH and Other Canonical Virulence Factors in Gut Colonization by Extraintestinal Pathogenic Escherichia coli.

Russell CW, Fleming BA, Jost CA, Tran A, Stenquist AT, Wambaugh MA, Bronner MP, Mulvey MA.

Infect Immun. 2018 Feb 20;86(3). pii: e00746-17. doi: 10.1128/IAI.00746-17. Print 2018 Mar.


Intramucosal lipomas of the colon implicate Cowden syndrome.

Caliskan A, Kohlmann WK, Affolter KE, Downs-Kelly E, Kanth P, Bronner MP.

Mod Pathol. 2018 Apr;31(4):643-651. doi: 10.1038/modpathol.2017.161. Epub 2017 Dec 1.


Control of intestinal stem cell function and proliferation by mitochondrial pyruvate metabolism.

Schell JC, Wisidagama DR, Bensard C, Zhao H, Wei P, Tanner J, Flores A, Mohlman J, Sorensen LK, Earl CS, Olson KA, Miao R, Waller TC, Delker D, Kanth P, Jiang L, DeBerardinis RJ, Bronner MP, Li DY, Cox JE, Christofk HR, Lowry WE, Thummel CS, Rutter J.

Nat Cell Biol. 2017 Sep;19(9):1027-1036. doi: 10.1038/ncb3593. Epub 2017 Aug 14.


PD-L1 protein expression in tumour cells and immune cells in mismatch repair protein-deficient and -proficient colorectal cancer: the foundation study using the SP142 antibody and whole section immunohistochemistry.

El Jabbour T, Ross JS, Sheehan CE, Affolter KE, Geiersbach KB, Boguniewicz A, Ainechi S, Bronner MP, Jones DM, Lee H.

J Clin Pathol. 2018 Jan;71(1):46-51. doi: 10.1136/jclinpath-2017-204525. Epub 2017 Jun 30.


A Clinicopathologic Evaluation of Incidental Fundic Gland Polyps With Dysplasia: Implications for Clinical Management.

Lloyd IE, Kohlmann WK, Gligorich K, Hall A, Lyon E, Downs-Kelly E, Samowitz WS, Bronner MP.

Am J Gastroenterol. 2017 Jul;112(7):1094-1102. doi: 10.1038/ajg.2017.125. Epub 2017 May 2.


Novel MicroRNA Signature to Differentiate Ulcerative Colitis from Crohn Disease: A Genome-Wide Study Using Next Generation Sequencing.

Lin J, Zhang X, Zhao Z, Welker NC, Li Y, Liu Y, Bronner MP.

Microrna. 2016;5(3):222-229.


Gastrointestinal Polyposis in Cowden Syndrome.

Shaco-Levy R, Jasperson KW, Martin K, Samadder NJ, Burt RW, Ying J, Bronner MP.

J Clin Gastroenterol. 2017 Aug;51(7):e60-e67. doi: 10.1097/MCG.0000000000000703.


Fragment Length of Circulating Tumor DNA.

Underhill HR, Kitzman JO, Hellwig S, Welker NC, Daza R, Baker DN, Gligorich KM, Rostomily RC, Bronner MP, Shendure J.

PLoS Genet. 2016 Jul 18;12(7):e1006162. doi: 10.1371/journal.pgen.1006162. eCollection 2016 Jul.


Low miR-187 expression promotes resistance to chemoradiation therapy in vitro and correlates with treatment failure in patients with esophageal adenocarcinoma.

Lynam-Lennon N, Bibby BA, Mongan AM, Marignol L, Paxton CN, Geiersbach K, Bronner MP, O'Sullivan J, Reynolds J, Maher SG.

Mol Med. 2016 May 23;22. doi: 10.2119/molmed.2016.00020.


Gene Signature in Sessile Serrated Polyps Identifies Colon Cancer Subtype.

Kanth P, Bronner MP, Boucher KM, Burt RW, Neklason DW, Hagedorn CH, Delker DA.

Cancer Prev Res (Phila). 2016 Jun;9(6):456-65. doi: 10.1158/1940-6207.CAPR-15-0363. Epub 2016 Mar 29.


Morphologic characterization of hamartomatous gastrointestinal polyps in Cowden syndrome, Peutz-Jeghers syndrome, and juvenile polyposis syndrome.

Shaco-Levy R, Jasperson KW, Martin K, Samadder NJ, Burt RW, Ying J, Bronner MP.

Hum Pathol. 2016 Mar;49:39-48. doi: 10.1016/j.humpath.2015.10.002. Epub 2015 Oct 31.


MicroRNA-146a constrains multiple parameters of intestinal immunity and increases susceptibility to DSS colitis.

Runtsch MC, Hu R, Alexander M, Wallace J, Kagele D, Petersen C, Valentine JF, Welker NC, Bronner MP, Chen X, Smith DP, Ajami NJ, Petrosino JF, Round JL, O'Connell RM.

Oncotarget. 2015 Oct 6;6(30):28556-72.


The acinar differentiation determinant PTF1A inhibits initiation of pancreatic ductal adenocarcinoma.

Krah NM, De La O JP, Swift GH, Hoang CQ, Willet SG, Chen Pan F, Cash GM, Bronner MP, Wright CV, MacDonald RJ, Murtaugh LC.

Elife. 2015 Jul 7;4. doi: 10.7554/eLife.07125.


Overdiagnosis of high-grade dysplasia in Barrett's esophagus: a multicenter, international study.

Sangle NA, Taylor SL, Emond MJ, Depot M, Overholt BF, Bronner MP.

Mod Pathol. 2015 Jun;28(6):758-65. doi: 10.1038/modpathol.2015.2. Epub 2015 Feb 13.


Up-regulation of mitochondrial chaperone TRAP1 in ulcerative colitis associated colorectal cancer.

Chen R, Pan S, Lai K, Lai LA, Crispin DA, Bronner MP, Brentnall TA.

World J Gastroenterol. 2014 Dec 7;20(45):17037-48. doi: 10.3748/wjg.v20.i45.17037.


RNA sequencing of sessile serrated colon polyps identifies differentially expressed genes and immunohistochemical markers.

Delker DA, McGettigan BM, Kanth P, Pop S, Neklason DW, Bronner MP, Burt RW, Hagedorn CH.

PLoS One. 2014 Feb 12;9(2):e88367. doi: 10.1371/journal.pone.0088367. eCollection 2014.


Clonal expansions and short telomeres are associated with neoplasia in early-onset, but not late-onset, ulcerative colitis.

Salk JJ, Bansal A, Lai LA, Crispin DA, Ussakli CH, Horwitz MS, Bronner MP, Brentnall TA, Loeb LA, Rabinovitch PS, Risques RA.

Inflamm Bowel Dis. 2013 Nov;19(12):2593-602. doi: 10.1097/MIB.0b013e3182a87640.


Novel specific microRNA biomarkers in idiopathic inflammatory bowel disease unrelated to disease activity.

Lin J, Welker NC, Zhao Z, Li Y, Zhang J, Reuss SA, Zhang X, Lee H, Liu Y, Bronner MP.

Mod Pathol. 2014 Apr;27(4):602-8. doi: 10.1038/modpathol.2013.152. Epub 2013 Sep 20.


BRAF V600E mutation detection by immunohistochemistry in colorectal carcinoma.

Affolter K, Samowitz W, Tripp S, Bronner MP.

Genes Chromosomes Cancer. 2013 Aug;52(8):748-52. doi: 10.1002/gcc.22070. Epub 2013 May 7.


Distinguishing Barrett gastric foveolar dysplasia from reactive cardiac mucosa in gastroesophageal reflux disease.

Patil DT, Bennett AE, Mahajan D, Bronner MP.

Hum Pathol. 2013 Jun;44(6):1146-53. doi: 10.1016/j.humpath.2012.10.004. Epub 2013 Jan 17.


MicroRNA expression patterns in indeterminate inflammatory bowel disease.

Lin J, Cao Q, Zhang J, Li Y, Shen B, Zhao Z, Chinnaiyan AM, Bronner MP.

Mod Pathol. 2013 Jan;26(1):148-54. doi: 10.1038/modpathol.2012.131. Epub 2012 Aug 17.


A five-marker panel in a multiplex PCR accurately detects microsatellite instability-high colorectal tumors without control DNA.

Patil DT, Bronner MP, Portier BP, Fraser CR, Plesec TP, Liu X.

Diagn Mol Pathol. 2012 Sep;21(3):127-33. doi: 10.1097/PDM.0b013e3182461cc3.


Stromal galectin-1 expression is associated with long-term survival in resectable pancreatic ductal adenocarcinoma.

Chen R, Pan S, Ottenhof NA, de Wilde RF, Wolfgang CL, Lane Z, Post J, Bronner MP, Willmann JK, Maitra A, Brentnall TA.

Cancer Biol Ther. 2012 Aug;13(10):899-907. doi: 10.4161/cbt.20842. Epub 2012 Aug 1.


Prospective study of the progression of low-grade dysplasia in ulcerative colitis using current cancer surveillance guidelines.

Zisman TL, Bronner MP, Rulyak S, Kowdley KV, Saunders M, Lee SD, Ko C, Kimmey MB, Stevens A, Maurer J, Brentnall TA.

Inflamm Bowel Dis. 2012 Dec;18(12):2240-6. doi: 10.1002/ibd.22912. Epub 2012 Apr 16.


Lipidomic profiling of serum and pancreatic fluid in chronic pancreatitis.

Stevens T, Berk MP, Lopez R, Chung YM, Zhang R, Parsi MA, Bronner MP, Feldstein AE.

Pancreas. 2012 May;41(4):518-22. doi: 10.1097/MPA.0b013e31823ca306.


Pan-colonic field defects are detected by CGH in the colons of UC patients with dysplasia/cancer.

Lai LA, Risques RA, Bronner MP, Rabinovitch PS, Crispin D, Chen R, Brentnall TA.

Cancer Lett. 2012 Jul 28;320(2):180-8. doi: 10.1016/j.canlet.2012.02.031. Epub 2012 Mar 2.


Arousal of cancer-associated stroma: overexpression of palladin activates fibroblasts to promote tumor invasion.

Brentnall TA, Lai LA, Coleman J, Bronner MP, Pan S, Chen R.

PLoS One. 2012;7(1):e30219. doi: 10.1371/journal.pone.0030219. Epub 2012 Jan 23.


Proteomics portrait of archival lesions of chronic pancreatitis.

Pan S, Chen R, Stevens T, Bronner MP, May D, Tamura Y, McIntosh MW, Brentnall TA.

PLoS One. 2011;6(11):e27574. doi: 10.1371/journal.pone.0027574. Epub 2011 Nov 23.


Composite intestinal adenoma-microcarcinoid.

Lin J, Goldblum JR, Bennett AE, Bronner MP, Liu X.

Am J Surg Pathol. 2012 Feb;36(2):292-5. doi: 10.1097/PAS.0b013e318236e4d2.


Prediction of adenocarcinoma in esophagectomy specimens based upon analysis of preresection biopsies of Barrett esophagus with at least high-grade dysplasia: a comparison of 2 systems.

Patil DT, Goldblum JR, Rybicki L, Plesec TP, Mendelin JE, Bennett AE, Castilla EA, Henricks WH, Schoenfield L, Skacel M, Yerian LM, Rice TW, Bronner MP, Downs-Kelly E.

Am J Surg Pathol. 2012 Jan;36(1):134-41. doi: 10.1097/PAS.0b013e3182354e43.


AGR2 is a novel surface antigen that promotes the dissemination of pancreatic cancer cells through regulation of cathepsins B and D.

Dumartin L, Whiteman HJ, Weeks ME, Hariharan D, Dmitrovic B, Iacobuzio-Donahue CA, Brentnall TA, Bronner MP, Feakins RM, Timms JF, Brennan C, Lemoine NR, Crnogorac-Jurcevic T.

Cancer Res. 2011 Nov 15;71(22):7091-102. doi: 10.1158/0008-5472.CAN-11-1367. Epub 2011 Sep 26.


Does neoadjuvant therapy alter KRAS and/or MSI results in rectal adenocarcinoma testing?

Ondrejka SL, Schaeffer DF, Jakubowski MA, Owen DA, Bronner MP.

Am J Surg Pathol. 2011 Sep;35(9):1327-30. doi: 10.1097/PAS.0b013e3182253800.


Backwash ileitis does not affect pouch outcome in patients with ulcerative colitis with restorative proctocolectomy.

Arrossi AV, Kariv Y, Bronner MP, Hammel J, Remzi FH, Fazio VW, Goldblum JR.

Clin Gastroenterol Hepatol. 2011 Nov;9(11):981-8. doi: 10.1016/j.cgh.2011.07.018. Epub 2011 Jul 30.


Durability of radiofrequency ablation in Barrett's esophagus with dysplasia.

Shaheen NJ, Overholt BF, Sampliner RE, Wolfsen HC, Wang KK, Fleischer DE, Sharma VK, Eisen GM, Fennerty MB, Hunter JG, Bronner MP, Goldblum JR, Bennett AE, Mashimo H, Rothstein RI, Gordon SR, Edmundowicz SA, Madanick RD, Peery AF, Muthusamy VR, Chang KJ, Kimmey MB, Spechler SJ, Siddiqui AA, Souza RF, Infantolino A, Dumot JA, Falk GW, Galanko JA, Jobe BA, Hawes RH, Hoffman BJ, Sharma P, Chak A, Lightdale CJ.

Gastroenterology. 2011 Aug;141(2):460-8. doi: 10.1053/j.gastro.2011.04.061. Epub 2011 May 6.


The esophageal wall.

Rice TW, Bronner MP.

Thorac Surg Clin. 2011 May;21(2):299-305, x. doi: 10.1016/j.thorsurg.2011.01.005.


Protein alterations associated with pancreatic cancer and chronic pancreatitis found in human plasma using global quantitative proteomics profiling.

Pan S, Chen R, Crispin DA, May D, Stevens T, McIntosh MW, Bronner MP, Ziogas A, Anton-Culver H, Brentnall TA.

J Proteome Res. 2011 May 6;10(5):2359-76. doi: 10.1021/pr101148r. Epub 2011 Mar 28.


Ulcerative colitis-associated colorectal cancer arises in a field of short telomeres, senescence, and inflammation.

Risques RA, Lai LA, Himmetoglu C, Ebaee A, Li L, Feng Z, Bronner MP, Al-Lahham B, Kowdley KV, Lindor KD, Rabinovitch PS, Brentnall TA.

Cancer Res. 2011 Mar 1;71(5):1669-79. doi: 10.1158/0008-5472.CAN-10-1966.


Using optical markers of nondysplastic rectal epithelial cells to identify patients with ulcerative colitis-associated neoplasia.

Bista RK, Brentnall TA, Bronner MP, Langmead CJ, Brand RE, Liu Y.

Inflamm Bowel Dis. 2011 Dec;17(12):2427-35. doi: 10.1002/ibd.21639. Epub 2011 Feb 23.


Upper and Lower Gastrointestinal Findings in PTEN Mutation-Positive Cowden Syndrome Patients Participating in an Active Surveillance Program.

Levi Z, Baris HN, Kedar I, Niv Y, Geller A, Gal E, Gingold R, Morgenstern S, Baruch Y, Leach BH, Bronner MP, Eng C.

Clin Transl Gastroenterol. 2011 Nov 17;2:e5. doi: 10.1038/ctg.2011.4.


Investigating neoplastic progression of ulcerative colitis with label-free comparative proteomics.

May D, Pan S, Crispin DA, Lai K, Bronner MP, Hogan J, Hockenbery DM, McIntosh M, Brentnall TA, Chen R.

J Proteome Res. 2011 Jan 7;10(1):200-9. doi: 10.1021/pr100574p. Epub 2010 Oct 20.


Array-based comparative genomic hybridization in ulcerative colitis neoplasia: single non-dysplastic biopsies distinguish progressors from non-progressors.

Bronner MP, Skacel M, Crispin DA, Hoff PD, Emond MJ, Lai LA, Tubbs RR, O'Sullivan JN, Rabinovitch PS, Brentnall TA.

Mod Pathol. 2010 Dec;23(12):1624-33. doi: 10.1038/modpathol.2010.161. Epub 2010 Aug 27.


Endoscopic ultrasound, secretin endoscopic pancreatic function test, and histology: correlation in chronic pancreatitis.

Albashir S, Bronner MP, Parsi MA, Walsh RM, Stevens T.

Am J Gastroenterol. 2010 Nov;105(11):2498-503. doi: 10.1038/ajg.2010.274. Epub 2010 Jul 6.


Pilot study of blood biomarker candidates for detection of pancreatic cancer.

Chen R, Crispin DA, Pan S, Hawley S, McIntosh MW, May D, Anton-Culver H, Ziogas A, Bronner MP, Brentnall TA.

Pancreas. 2010 Oct;39(7):981-8. doi: 10.1097/MPA.0b013e3181dac920.


Serum leptin and adiponectin levels and risk of Barrett's esophagus and intestinal metaplasia of the gastroesophageal junction.

Thompson OM, Beresford SA, Kirk EA, Bronner MP, Vaughan TL.

Obesity (Silver Spring). 2010 Nov;18(11):2204-11. doi: 10.1038/oby.2009.508. Epub 2010 Jan 28.


Proteins That Underlie Neoplastic Progression of Ulcerative Colitis.

Brentnall TA, Pan S, Bronner MP, Crispin DA, Mirzaei H, Cooke K, Tamura Y, Nikolskaya T, Jebailey L, Goodlett DR, McIntosh M, Aebersold R, Rabinovitch PS, Chen R.

Proteomics Clin Appl. 2009 Sep 14;3(11):1326.


Clonal expansions in ulcerative colitis identify patients with neoplasia.

Salk JJ, Salipante SJ, Risques RA, Crispin DA, Li L, Bronner MP, Brentnall TA, Rabinovitch PS, Horwitz MS, Loeb LA.

Proc Natl Acad Sci U S A. 2009 Dec 8;106(49):20871-6. doi: 10.1073/pnas.0909428106. Epub 2009 Nov 19.

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