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Items: 1 to 50 of 83

1.

Complementary energy acquisition via aerobic anoxygenic photosynthesis and carbon monoxide oxidation by Planktomarina temperata of the Roseobacter group.

Giebel HA, Wolterink M, Brinkhoff T, Simon M.

FEMS Microbiol Ecol. 2019 May 1;95(5). pii: fiz050. doi: 10.1093/femsec/fiz050.

PMID:
31055603
2.

Phaeobacter inhibens controls bacterial community assembly on a marine diatom.

Majzoub ME, Beyersmann PG, Simon M, Thomas T, Brinkhoff T, Egan S.

FEMS Microbiol Ecol. 2019 Jun 1;95(6). pii: fiz060. doi: 10.1093/femsec/fiz060.

PMID:
31034047
3.

Cobaviruses - a new globally distributed phage group infecting Rhodobacteraceae in marine ecosystems.

Bischoff V, Bunk B, Meier-Kolthoff JP, Spröer C, Poehlein A, Dogs M, Nguyen M, Petersen J, Daniel R, Overmann J, Göker M, Simon M, Brinkhoff T, Moraru C.

ISME J. 2019 Jun;13(6):1404-1421. doi: 10.1038/s41396-019-0362-7. Epub 2019 Feb 4.

PMID:
30718806
4.

An Unprecedented Medium-Chain Diunsaturated N-acylhomoserine Lactone from Marine Roseobacter Group Bacteria.

Ziesche L, Wolter L, Wang H, Brinkhoff T, Pohlner M, Engelen B, Wagner-Döbler I, Schulz S.

Mar Drugs. 2018 Dec 31;17(1). pii: E20. doi: 10.3390/md17010020.

5.

N-Acylated amino acid methyl esters from marine Roseobacter group bacteria.

Bruns H, Ziesche L, Taniwal NK, Wolter L, Brinkhoff T, Herrmann J, Müller R, Schulz S.

Beilstein J Org Chem. 2018 Dec 3;14:2964-2973. doi: 10.3762/bjoc.14.276. eCollection 2018.

6.

Genome sequence of Planktotalea frisia type strain (SH6-1T), a representative of the Roseobacter group isolated from the North Sea during a phytoplankton bloom.

Bakenhus I, Voget S, Poehlein A, Brinkhoff T, Daniel R, Simon M.

Stand Genomic Sci. 2018 Apr 11;13:7. doi: 10.1186/s40793-018-0311-5. eCollection 2018.

7.

Tritonibacter horizontis gen. nov., sp. nov., a member of the Rhodobacteraceae, isolated from the Deepwater Horizon oil spill.

Klotz F, Brinkhoff T, Freese HM, Wietz M, Teske A, Simon M, Giebel HA.

Int J Syst Evol Microbiol. 2018 Mar;68(3):736-744. doi: 10.1099/ijsem.0.002573. Epub 2018 Feb 6.

PMID:
29458459
8.

Phaeobacter porticola sp. nov., an antibiotic-producing bacterium isolated from a sea harbour.

Breider S, Freese HM, Spröer C, Simon M, Overmann J, Brinkhoff T.

Int J Syst Evol Microbiol. 2017 Jul;67(7):2153-2159. doi: 10.1099/ijsem.0.001879. Epub 2017 Jul 12.

PMID:
28699865
9.

Rhodobacteraceae on the marine brown alga Fucus spiralis are abundant and show physiological adaptation to an epiphytic lifestyle.

Dogs M, Wemheuer B, Wolter L, Bergen N, Daniel R, Simon M, Brinkhoff T.

Syst Appl Microbiol. 2017 Sep;40(6):370-382. doi: 10.1016/j.syapm.2017.05.006. Epub 2017 Jun 15.

PMID:
28641923
10.

Dual function of tropodithietic acid as antibiotic and signaling molecule in global gene regulation of the probiotic bacterium Phaeobacter inhibens.

Beyersmann PG, Tomasch J, Son K, Stocker R, Göker M, Wagner-Döbler I, Simon M, Brinkhoff T.

Sci Rep. 2017 Apr 7;7(1):730. doi: 10.1038/s41598-017-00784-7.

11.

High wind speeds prevent formation of a distinct bacterioneuston community in the sea-surface microlayer.

Rahlff J, Stolle C, Giebel HA, Brinkhoff T, Ribas-Ribas M, Hodapp D, Wurl O.

FEMS Microbiol Ecol. 2017 May 1;93(5). doi: 10.1093/femsec/fix041.

12.

Metabolism of 2,3-dihydroxypropane-1-sulfonate by marine bacteria.

Celik E, Maczka M, Bergen N, Brinkhoff T, Schulz S, Dickschat JS.

Org Biomol Chem. 2017 Apr 5;15(14):2919-2922. doi: 10.1039/c7ob00357a.

PMID:
28327713
13.

Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats.

Simon M, Scheuner C, Meier-Kolthoff JP, Brinkhoff T, Wagner-Döbler I, Ulbrich M, Klenk HP, Schomburg D, Petersen J, Göker M.

ISME J. 2017 Jun;11(6):1483-1499. doi: 10.1038/ismej.2016.198. Epub 2017 Jan 20.

14.

Draft genome sequence of the marine Rhodobacteraceae strain O3.65, cultivated from oil-polluted seawater of the Deepwater Horizon oil spill.

Giebel HA, Klotz F, Voget S, Poehlein A, Grosser K, Teske A, Brinkhoff T.

Stand Genomic Sci. 2016 Oct 13;11:81. eCollection 2016.

15.

Biogeography and environmental genomics of the Roseobacter-affiliated pelagic CHAB-I-5 lineage.

Billerbeck S, Wemheuer B, Voget S, Poehlein A, Giebel HA, Brinkhoff T, Gram L, Jeffrey WH, Daniel R, Simon M.

Nat Microbiol. 2016 May 16;1(7):16063. doi: 10.1038/nmicrobiol.2016.63.

PMID:
27572966
16.

Dimethylsulfoniopropionate Promotes Process Outgrowth in Neural Cells and Exerts Protective Effects against Tropodithietic Acid.

Wichmann H, Brinkhoff T, Simon M, Richter-Landsberg C.

Mar Drugs. 2016 May 6;14(5). pii: E89. doi: 10.3390/md14050089.

17.

Cytotoxic Effects of Tropodithietic Acid on Mammalian Clonal Cell Lines of Neuronal and Glial Origin.

Wichmann H, Vocke F, Brinkhoff T, Simon M, Richter-Landsberg C.

Mar Drugs. 2015 Nov 27;13(12):7113-23. doi: 10.3390/md13127058.

18.

Phaeobacter inhibens from the Roseobacter clade has an environmental niche as a surface colonizer in harbors.

Gram L, Rasmussen BB, Wemheuer B, Bernbom N, Ng YY, Porsby CH, Breider S, Brinkhoff T.

Syst Appl Microbiol. 2015 Oct;38(7):483-93. doi: 10.1016/j.syapm.2015.07.006. Epub 2015 Aug 14.

PMID:
26343311
19.

Homoserine Lactones, Methyl Oligohydroxybutyrates, and Other Extracellular Metabolites of Macroalgae-Associated Bacteria of the Roseobacter Clade: Identification and Functions.

Ziesche L, Bruns H, Dogs M, Wolter L, Mann F, Wagner-Döbler I, Brinkhoff T, Schulz S.

Chembiochem. 2015 Sep 21;16(14):2094-107. doi: 10.1002/cbic.201500189. Epub 2015 Aug 19.

PMID:
26212108
20.

Different utilization of alginate and other algal polysaccharides by marine Alteromonas macleodii ecotypes.

Neumann AM, Balmonte JP, Berger M, Giebel HA, Arnosti C, Voget S, Simon M, Brinkhoff T, Wietz M.

Environ Microbiol. 2015 Oct;17(10):3857-68. doi: 10.1111/1462-2920.12862. Epub 2015 May 8.

PMID:
25847866
21.
22.

Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans.

Wietz M, Wemheuer B, Simon H, Giebel HA, Seibt MA, Daniel R, Brinkhoff T, Simon M.

Environ Microbiol. 2015 Oct;17(10):3822-31. doi: 10.1111/1462-2920.12842. Epub 2015 Apr 8.

PMID:
25753990
23.

Large-Scale 13C flux profiling reveals conservation of the Entner-Doudoroff pathway as a glycolytic strategy among marine bacteria that use glucose.

Klingner A, Bartsch A, Dogs M, Wagner-Döbler I, Jahn D, Simon M, Brinkhoff T, Becker J, Wittmann C.

Appl Environ Microbiol. 2015 Apr;81(7):2408-22. doi: 10.1128/AEM.03157-14. Epub 2015 Jan 23.

24.

Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252(T) isolated from marine sediment.

Breider S, Teshima H, Petersen J, Chertkov O, Dalingault H, Chen A, Pati A, Ivanova N, Lapidus A, Goodwin LA, Chain P, Detter JC, Rohde M, Tindall BJ, Kyrpides NC, Woyke T, Simon M, Göker M, Klenk HP, Brinkhoff T.

Stand Genomic Sci. 2014 Jan 25;9(3):687-703. doi: 10.4056/sigs.3828824. eCollection 2014 Jun 15.

25.

Genome-scale data suggest reclassifications in the Leisingera-Phaeobacter cluster including proposals for Sedimentitalea gen. nov. and Pseudophaeobacter gen. nov.

Breider S, Scheuner C, Schumann P, Fiebig A, Petersen J, Pradella S, Klenk HP, Brinkhoff T, Göker M.

Front Microbiol. 2014 Aug 11;5:416. doi: 10.3389/fmicb.2014.00416. eCollection 2014.

26.

Adaptation of an abundant Roseobacter RCA organism to pelagic systems revealed by genomic and transcriptomic analyses.

Voget S, Wemheuer B, Brinkhoff T, Vollmers J, Dietrich S, Giebel HA, Beardsley C, Sardemann C, Bakenhus I, Billerbeck S, Daniel R, Simon M.

ISME J. 2015 Feb;9(2):371-84. doi: 10.1038/ismej.2014.134. Epub 2014 Aug 1.

27.

Genome sequence of Phaeobacter inhibens type strain (T5(T)), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens.

Dogs M, Voget S, Teshima H, Petersen J, Davenport K, Dalingault H, Chen A, Pati A, Ivanova N, Goodwin LA, Chain P, Detter JC, Standfest S, Rohde M, Gronow S, Kyrpides NC, Woyke T, Simon M, Klenk HP, Göker M, Brinkhoff T.

Stand Genomic Sci. 2013 Dec 15;9(2):334-50. doi: 10.4056/sigs.4448212. eCollection 2013 Dec 20.

28.

Genome sequence of Phaeobacter daeponensis type strain (DSM 23529(T)), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis.

Dogs M, Teshima H, Petersen J, Fiebig A, Chertkov O, Dalingault H, Chen A, Pati A, Goodwin LA, Chain P, Detter JC, Ivanova N, Lapidus A, Rohde M, Gronow S, Kyrpides NC, Woyke T, Simon M, Göker M, Klenk HP, Brinkhoff T.

Stand Genomic Sci. 2013 Oct 3;9(1):142-59. doi: 10.4056/sigs.4287962. eCollection 2013 Oct 16.

29.

Complete genome sequence of the marine methyl-halide oxidizing Leisingera methylohalidivorans type strain (DSM 14336(T)), a representative of the Roseobacter clade.

Buddruhs N, Chertkov O, Petersen J, Fiebig A, Chen A, Pati A, Ivanova N, Lapidus A, Goodwin LA, Chain P, Detter JC, Gronow S, Kyrpides NC, Woyke T, Göker M, Brinkhoff T, Klenk HP.

Stand Genomic Sci. 2013 Oct 4;9(1):128-41. doi: 10.4056/sigs.4297965. eCollection 2013 Oct 16.

30.

Genome sequence of the phage-gene rich marine Phaeobacter arcticus type strain DSM 23566(T.).

Freese HM, Dalingault H, Petersen J, Pradella S, Davenport K, Teshima H, Chen A, Pati A, Ivanova N, Goodwin LA, Chain P, Detter JC, Rohde M, Gronow S, Kyrpides NC, Woyke T, Brinkhoff T, Göker M, Overmann J, Klenk HP.

Stand Genomic Sci. 2013 Jul 30;8(3):450-64. doi: 10.4056/sigs.383362. eCollection 2013 Jul 30.

31.

Genome sequence of Phaeobacter caeruleus type strain (DSM 24564(T)), a surface-associated member of the marine Roseobacter clade.

Beyersmann PG, Chertkov O, Petersen J, Fiebig A, Chen A, Pati A, Ivanova N, Lapidus A, Goodwin LA, Chain P, Detter JC, Rohde M, Gronow S, Kyrpides NC, Woyke T, Simon M, Göker M, Klenk HP, Brinkhoff T.

Stand Genomic Sci. 2013 Jul 30;8(3):403-19. doi: 10.4056/sigs.3927623. eCollection 2013 Jul 30.

32.

Genome sequence of the Leisingera aquimarina type strain (DSM 24565(T)), a member of the marine Roseobacter clade rich in extrachromosomal elements.

Riedel T, Teshima H, Petersen J, Fiebig A, Davenport K, Daligault H, Erkkila T, Gu W, Munk C, Xu Y, Chen A, Pati A, Ivanova N, Goodwin LA, Chain P, Detter JC, Rohde M, Gronow S, Kyrpides NC, Woyke T, Göker M, Brinkhoff T, Klenk HP.

Stand Genomic Sci. 2013 Jul 30;8(3):389-402. doi: 10.4056/sigs.3858183. eCollection 2013 Jul 30.

33.

Molecular and phenotypic analyses reveal the non-identity of the Phaeobacter gallaeciensis type strain deposits CIP 105210T and DSM 17395.

Buddruhs N, Pradella S, Göker M, Päuker O, Pukall R, Spröer C, Schumann P, Petersen J, Brinkhoff T.

Int J Syst Evol Microbiol. 2013 Nov;63(Pt 11):4340-9. doi: 10.1099/ijs.0.053900-0.

PMID:
24187021
34.

Planktomarina temperata gen. nov., sp. nov., belonging to the globally distributed RCA cluster of the marine Roseobacter clade, isolated from the German Wadden Sea.

Giebel HA, Kalhoefer D, Gahl-Janssen R, Choo YJ, Lee K, Cho JC, Tindall BJ, Rhiel E, Beardsley C, Aydogmus OO, Voget S, Daniel R, Simon M, Brinkhoff T.

Int J Syst Evol Microbiol. 2013 Nov;63(Pt 11):4207-17. doi: 10.1099/ijs.0.053249-0. Epub 2013 Jun 21.

PMID:
23793856
35.

Isotopically labeled sulfur compounds and synthetic selenium and tellurium analogues to study sulfur metabolism in marine bacteria.

Brock NL, Citron CA, Zell C, Berger M, Wagner-Döbler I, Petersen J, Brinkhoff T, Simon M, Dickschat JS.

Beilstein J Org Chem. 2013 May 15;9:942-50. doi: 10.3762/bjoc.9.108. Print 2013.

36.

Distinct seasonal growth patterns of the bacterium Planktotalea frisia in the North Sea and specific interaction with phytoplankton algae.

Hahnke S, Sperling M, Langer T, Wichels A, Gerdts G, Beardsley C, Brinkhoff T, Simon M.

FEMS Microbiol Ecol. 2013 Nov;86(2):185-99. doi: 10.1111/1574-6941.12151. Epub 2013 Jun 19.

37.

Poles apart: Arctic and Antarctic Octadecabacter strains share high genome plasticity and a new type of xanthorhodopsin.

Vollmers J, Voget S, Dietrich S, Gollnow K, Smits M, Meyer K, Brinkhoff T, Simon M, Daniel R.

PLoS One. 2013 May 6;8(5):e63422. doi: 10.1371/journal.pone.0063422. Print 2013.

38.

Genomics and physiology of a marine flavobacterium encoding a proteorhodopsin and a xanthorhodopsin-like protein.

Riedel T, Gómez-Consarnau L, Tomasch J, Martin M, Jarek M, González JM, Spring S, Rohlfs M, Brinkhoff T, Cypionka H, Göker M, Fiebig A, Klein J, Goesmann A, Fuhrman JA, Wagner-Döbler I.

PLoS One. 2013;8(3):e57487. doi: 10.1371/journal.pone.0057487. Epub 2013 Mar 4.

39.

Physiological diversity of Roseobacter clade bacteria co-occurring during a phytoplankton bloom in the North Sea.

Hahnke S, Brock NL, Zell C, Simon M, Dickschat JS, Brinkhoff T.

Syst Appl Microbiol. 2013 Feb;36(1):39-48. doi: 10.1016/j.syapm.2012.09.004. Epub 2012 Dec 21.

PMID:
23265193
40.

Epibacterium ulvae gen. nov., sp. nov., epibiotic bacteria isolated from the surface of a marine alga.

Penesyan A, Breider S, Schumann P, Tindall BJ, Egan S, Brinkhoff T.

Int J Syst Evol Microbiol. 2013 May;63(Pt 5):1589-96. doi: 10.1099/ijs.0.042838-0. Epub 2012 Aug 17.

PMID:
22904216
41.

Roseobacter clade bacteria are abundant in coastal sediments and encode a novel combination of sulfur oxidation genes.

Lenk S, Moraru C, Hahnke S, Arnds J, Richter M, Kube M, Reinhardt R, Brinkhoff T, Harder J, Amann R, Mußmann M.

ISME J. 2012 Dec;6(12):2178-87. doi: 10.1038/ismej.2012.66. Epub 2012 Jun 28.

42.

Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life.

Thole S, Kalhoefer D, Voget S, Berger M, Engelhardt T, Liesegang H, Wollherr A, Kjelleberg S, Daniel R, Simon M, Thomas T, Brinkhoff T.

ISME J. 2012 Dec;6(12):2229-44. doi: 10.1038/ismej.2012.62. Epub 2012 Jun 21.

43.

Pelagimonas varians gen. nov., sp. nov., isolated from the southern North Sea.

Hahnke S, Tindall BJ, Schumann P, Simon M, Brinkhoff T.

Int J Syst Evol Microbiol. 2013 Mar;63(Pt 3):835-43. doi: 10.1099/ijs.0.040675-0. Epub 2012 May 18.

PMID:
22611199
44.

Genetic analysis of the upper phenylacetate catabolic pathway in the production of tropodithietic acid by Phaeobacter gallaeciensis.

Berger M, Brock NL, Liesegang H, Dogs M, Preuth I, Simon M, Dickschat JS, Brinkhoff T.

Appl Environ Microbiol. 2012 May;78(10):3539-51. doi: 10.1128/AEM.07657-11. Epub 2012 Mar 9.

45.

Biogeography and phylogenetic diversity of a cluster of exclusively marine myxobacteria.

Brinkhoff T, Fischer D, Vollmers J, Voget S, Beardsley C, Thole S, Mussmann M, Kunze B, Wagner-Döbler I, Daniel R, Simon M.

ISME J. 2012 Jun;6(6):1260-72. doi: 10.1038/ismej.2011.190. Epub 2011 Dec 22.

46.

Composition of humic acid-degrading estuarine and marine bacterial communities.

Rocker D, Brinkhoff T, Grüner N, Dogs M, Simon M.

FEMS Microbiol Ecol. 2012 Apr;80(1):45-63. doi: 10.1111/j.1574-6941.2011.01269.x. Epub 2012 Jan 9.

47.

Tropodithietic acid production in Phaeobacter gallaeciensis is regulated by N-acyl homoserine lactone-mediated quorum sensing.

Berger M, Neumann A, Schulz S, Simon M, Brinkhoff T.

J Bacteriol. 2011 Dec;193(23):6576-85. doi: 10.1128/JB.05818-11. Epub 2011 Sep 23.

48.

Planktotalea frisia gen. nov., sp. nov., isolated from the southern North Sea.

Hahnke S, Tindall BJ, Schumann P, Sperling M, Brinkhoff T, Simon M.

Int J Syst Evol Microbiol. 2012 Jul;62(Pt 7):1619-24. doi: 10.1099/ijs.0.033563-0. Epub 2011 Sep 2.

PMID:
21890723
49.

Comparative genome analysis and genome-guided physiological analysis of Roseobacter litoralis.

Kalhoefer D, Thole S, Voget S, Lehmann R, Liesegang H, Wollher A, Daniel R, Simon M, Brinkhoff T.

BMC Genomics. 2011 Jun 21;12:324. doi: 10.1186/1471-2164-12-324.

50.

Origin and evolution of a novel DnaA-like plasmid replication type in Rhodobacterales.

Petersen J, Brinkmann H, Berger M, Brinkhoff T, Päuker O, Pradella S.

Mol Biol Evol. 2011 Mar;28(3):1229-40. doi: 10.1093/molbev/msq310. Epub 2010 Nov 19.

PMID:
21097494

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