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Items: 1 to 50 of 66

1.

Emergence of New Delhi Metallo-β-Lactamase (NDM-5) in Klebsiella quasipneumoniae from Neonates in a Nigerian Hospital.

Brinkac LM, White R, D'Souza R, Nguyen K, Obaro SK, Fouts DE.

mSphere. 2019 Mar 13;4(2). pii: e00685-18. doi: 10.1128/mSphere.00685-18.

3.

Large-scale comparative analysis of microbial pan-genomes using PanOCT.

Inman JM, Sutton GG, Beck E, Brinkac LM, Clarke TH, Fouts DE.

Bioinformatics. 2019 Mar 15;35(6):1049-1050. doi: 10.1093/bioinformatics/bty744.

4.

PanACEA: a bioinformatics tool for the exploration and visualization of bacterial pan-chromosomes.

Clarke TH, Brinkac LM, Inman JM, Sutton G, Fouts DE.

BMC Bioinformatics. 2018 Jun 27;19(1):246. doi: 10.1186/s12859-018-2250-y.

5.

Spatial and Environmental Variation of the Human Hair Microbiota.

Brinkac L, Clarke TH, Singh H, Greco C, Gomez A, Torralba MG, Frank B, Nelson KE.

Sci Rep. 2018 Jun 13;8(1):9017. doi: 10.1038/s41598-018-27100-1.

6.

Multidrug resistant pathogens respond differently to the presence of co-pathogen, commensal, probiotic and host cells.

Chan AP, Choi Y, Brinkac LM, Krishnakumar R, DePew J, Kim M, Hinkle MK, Lesho EP, Fouts DE.

Sci Rep. 2018 Jun 5;8(1):8656. doi: 10.1038/s41598-018-26738-1.

7.

GGRaSP: a R-package for selecting representative genomes using Gaussian mixture models.

Clarke TH, Brinkac LM, Sutton G, Fouts DE.

Bioinformatics. 2018 Sep 1;34(17):3032-3034. doi: 10.1093/bioinformatics/bty300.

8.

Integrating the microbiome as a resource in the forensics toolkit.

Clarke TH, Gomez A, Singh H, Nelson KE, Brinkac LM.

Forensic Sci Int Genet. 2017 Sep;30:141-147. doi: 10.1016/j.fsigen.2017.06.008. Epub 2017 Jun 27.

9.

The Threat of Antimicrobial Resistance on the Human Microbiome.

Brinkac L, Voorhies A, Gomez A, Nelson KE.

Microb Ecol. 2017 Nov;74(4):1001-1008. doi: 10.1007/s00248-017-0985-z. Epub 2017 May 11. Review.

10.

Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease.

Loomba R, Seguritan V, Li W, Long T, Klitgord N, Bhatt A, Dulai PS, Caussy C, Bettencourt R, Highlander SK, Jones MB, Sirlin CB, Schnabl B, Brinkac L, Schork N, Chen CH, Brenner DA, Biggs W, Yooseph S, Venter JC, Nelson KE.

Cell Metab. 2017 May 2;25(5):1054-1062.e5. doi: 10.1016/j.cmet.2017.04.001.

11.

LOCUST: a custom sequence locus typer for classifying microbial isolates.

Brinkac LM, Beck E, Inman J, Venepally P, Fouts DE, Sutton G.

Bioinformatics. 2017 Jun 1;33(11):1725-1726. doi: 10.1093/bioinformatics/btx045.

12.

Comprehensive Genome Analysis of Carbapenemase-Producing Enterobacter spp.: New Insights into Phylogeny, Population Structure, and Resistance Mechanisms.

Chavda KD, Chen L, Fouts DE, Sutton G, Brinkac L, Jenkins SG, Bonomo RA, Adams MD, Kreiswirth BN.

MBio. 2016 Dec 13;7(6). pii: e02093-16. doi: 10.1128/mBio.02093-16.

13.

Acquisition and loss of virulence-associated factors during genome evolution and speciation in three clades of Bordetella species.

Linz B, Ivanov YV, Preston A, Brinkac L, Parkhill J, Kim M, Harris SR, Goodfield LL, Fry NK, Gorringe AR, Nicholson TL, Register KB, Losada L, Harvill ET.

BMC Genomics. 2016 Sep 30;17(1):767.

14.

Identification and taxonomic characterization of Bordetella pseudohinzii sp. nov. isolated from laboratory-raised mice.

Ivanov YV, Linz B, Register KB, Newman JD, Taylor DL, Boschert KR, Le Guyon S, Wilson EF, Brinkac LM, Sanka R, Greco SC, Klender PM, Losada L, Harvill ET.

Int J Syst Evol Microbiol. 2016 Dec;66(12):5452-5459. doi: 10.1099/ijsem.0.001540. Epub 2016 Oct 4.

15.

Whole genome sequencing of diverse Shiga toxin-producing and non-producing Escherichia coli strains reveals a variety of virulence and novel antibiotic resistance plasmids.

Losada L, DebRoy C, Radune D, Kim M, Sanka R, Brinkac L, Kariyawasam S, Shelton D, Fratamico PM, Kapur V, Feng PC.

Plasmid. 2016 Jan;83:8-11. doi: 10.1016/j.plasmid.2015.12.001. Epub 2015 Dec 31.

PMID:
26746359
16.

Draft genome sequences for the obligate bacterial predators Bacteriovorax spp. of four phylogenetic clusters.

Chen H, Brinkac LM, Mishra P, Li N, Lymperopoulou DS, Dickerson TL, Gordon-Bradley N, Williams HN, Badger JH.

Stand Genomic Sci. 2015 Mar 24;10:11. doi: 10.1186/1944-3277-10-11. eCollection 2015.

17.

Draft Genome Sequences of 53 Genetically Distinct Isolates of Bordetella bronchiseptica Representing 11 Terrestrial and Aquatic Hosts.

Register KB, Ivanov YV, Jacobs N, Meyer JA, Goodfield LL, Muse SJ, Smallridge WE, Brinkac L, Kim M, Sanka R, Harvill ET, Losada L.

Genome Announc. 2015 Apr 23;3(2). pii: e00152-15. doi: 10.1128/genomeA.00152-15.

18.

Draft Genome Sequences of Six Bordetella hinzii Isolates Acquired from Avian and Mammalian Hosts.

Register KB, Ivanov YV, Harvill ET, Brinkac L, Kim M, Losada L.

Genome Announc. 2015 Mar 19;3(2). pii: e00081-15. doi: 10.1128/genomeA.00081-15.

19.

Escherichia coli O-Antigen Gene Clusters of Serogroups O62, O68, O131, O140, O142, and O163: DNA Sequences and Similarity between O62 and O68, and PCR-Based Serogrouping.

Liu Y, Yan X, DebRoy C, Fratamico PM, Needleman DS, Li RW, Wang W, Losada L, Brinkac L, Radune D, Toro M, Hegde N, Meng J.

Biosensors (Basel). 2015 Feb 5;5(1):51-68. doi: 10.3390/bios5010051.

20.

Genome Sequences of Nine Bordetella holmesii Strains Isolated in the United States.

Harvill ET, Goodfield LL, Ivanov Y, Smallridge WE, Meyer JA, Cassiday PK, Tondella ML, Brinkac L, Sanka R, Kim M, Losada L.

Genome Announc. 2014 Jun 19;2(3). pii: e00438-14. doi: 10.1128/genomeA.00438-14.

21.

Standardized metadata for human pathogen/vector genomic sequences.

Dugan VG, Emrich SJ, Giraldo-Calderón GI, Harb OS, Newman RM, Pickett BE, Schriml LM, Stockwell TB, Stoeckert CJ Jr, Sullivan DE, Singh I, Ward DV, Yao A, Zheng J, Barrett T, Birren B, Brinkac L, Bruno VM, Caler E, Chapman S, Collins FH, Cuomo CA, Di Francesco V, Durkin S, Eppinger M, Feldgarden M, Fraser C, Fricke WF, Giovanni M, Henn MR, Hine E, Hotopp JD, Karsch-Mizrachi I, Kissinger JC, Lee EM, Mathur P, Mongodin EF, Murphy CI, Myers G, Neafsey DE, Nelson KE, Nierman WC, Puzak J, Rasko D, Roos DS, Sadzewicz L, Silva JC, Sobral B, Squires RB, Stevens RL, Tallon L, Tettelin H, Wentworth D, White O, Will R, Wortman J, Zhang Y, Scheuermann RH.

PLoS One. 2014 Jun 17;9(6):e99979. doi: 10.1371/journal.pone.0099979. eCollection 2014.

22.

Population structure of KPC-producing Klebsiella pneumoniae isolates from midwestern U.S. hospitals.

Wright MS, Perez F, Brinkac L, Jacobs MR, Kaye K, Cober E, van Duin D, Marshall SH, Hujer AM, Rudin SD, Hujer KM, Bonomo RA, Adams MD.

Antimicrob Agents Chemother. 2014 Aug;58(8):4961-5. doi: 10.1128/AAC.00125-14. Epub 2014 Jun 9.

23.

Genome Sequences of 28 Bordetella pertussis U.S. Outbreak Strains Dating from 2010 to 2012.

Harvill ET, Goodfield LL, Ivanov Y, Meyer JA, Newth C, Cassiday P, Tondella ML, Liao P, Zimmerman J, Meert K, Wessel D, Berger J, Dean JM, Holubkov R, Burr J, Liu T, Brinkac L, Kim M, Losada L.

Genome Announc. 2013 Dec 19;1(6). pii: e01075-13. doi: 10.1128/genomeA.01075-13.

24.

Draft Genome Sequences of Burkholderia cenocepacia ET12 Lineage Strains K56-2 and BC7.

Varga JJ, Losada L, Zelazny AM, Kim M, McCorrison J, Brinkac L, Sampaio EP, Greenberg DE, Singh I, Heiner C, Ashby M, Nierman WC, Holland SM, Goldberg JB.

Genome Announc. 2013 Oct 17;1(5). pii: e00841-13. doi: 10.1128/genomeA.00841-13.

25.

Pathogenomic inference of virulence-associated genes in Leptospira interrogans.

Lehmann JS, Fouts DE, Haft DH, Cannella AP, Ricaldi JN, Brinkac L, Harkins D, Durkin S, Sanka R, Sutton G, Moreno A, Vinetz JM, Matthias MA.

PLoS Negl Trop Dis. 2013 Oct 3;7(10):e2468. doi: 10.1371/journal.pntd.0002468. eCollection 2013.

26.

Draft Genome Sequence of a Single Cell of SAR86 Clade Subgroup IIIa.

Rusch DB, Lombardo MJ, Yee-Greenbaum J, Novotny M, Brinkac LM, Lasken RS, Dupont CL.

Genome Announc. 2013 Jan;1(1). pii: e00030-12. doi: 10.1128/genomeA.00030-12. Epub 2013 Jan 15.

27.

Draft genome sequence determination for cystic fibrosis and chronic granulomatous disease Burkholderia multivorans isolates.

Varga JJ, Losada L, Zelazny AM, Brinkac L, Harkins D, Radune D, Hostetler J, Sampaio EP, Ronning CM, Nierman WC, Greenberg DE, Holland SM, Goldberg JB.

J Bacteriol. 2012 Nov;194(22):6356-7. doi: 10.1128/JB.01306-12.

28.

PanOCT: automated clustering of orthologs using conserved gene neighborhood for pan-genomic analysis of bacterial strains and closely related species.

Fouts DE, Brinkac L, Beck E, Inman J, Sutton G.

Nucleic Acids Res. 2012 Dec;40(22):e172. doi: 10.1093/nar/gks757. Epub 2012 Aug 16.

29.

Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions.

Loper JE, Hassan KA, Mavrodi DV, Davis EW 2nd, Lim CK, Shaffer BT, Elbourne LD, Stockwell VO, Hartney SL, Breakwell K, Henkels MD, Tetu SG, Rangel LI, Kidarsa TA, Wilson NL, van de Mortel JE, Song C, Blumhagen R, Radune D, Hostetler JB, Brinkac LM, Durkin AS, Kluepfel DA, Wechter WP, Anderson AJ, Kim YC, Pierson LS 3rd, Pierson EA, Lindow SE, Kobayashi DY, Raaijmakers JM, Weller DM, Thomashow LS, Allen AE, Paulsen IT.

PLoS Genet. 2012 Jul;8(7):e1002784. doi: 10.1371/journal.pgen.1002784. Epub 2012 Jul 5.

30.

CharProtDB: a database of experimentally characterized protein annotations.

Madupu R, Richter A, Dodson RJ, Brinkac L, Harkins D, Durkin S, Shrivastava S, Sutton G, Haft D.

Nucleic Acids Res. 2012 Jan;40(Database issue):D237-41. doi: 10.1093/nar/gkr1133. Epub 2011 Dec 2.

31.

Genetic and phenotypic diversity in Burkholderia: contributions by prophage and phage-like elements.

Ronning CM, Losada L, Brinkac L, Inman J, Ulrich RL, Schell M, Nierman WC, Deshazer D.

BMC Microbiol. 2010 Jul 28;10:202. doi: 10.1186/1471-2180-10-202.

32.

New assembly, reannotation and analysis of the Entamoeba histolytica genome reveal new genomic features and protein content information.

Lorenzi HA, Puiu D, Miller JR, Brinkac LM, Amedeo P, Hall N, Caler EV.

PLoS Negl Trop Dis. 2010 Jun 15;4(6):e716. doi: 10.1371/journal.pntd.0000716.

33.

Meeting report: a workshop on Best Practices in Genome Annotation.

Madupu R, Brinkac LM, Harrow J, Wilming LG, Böhme U, Lamesch P, Hannick LI.

Database (Oxford). 2010;2010:baq001. Epub 2010 Feb 18.

34.

Continuing evolution of Burkholderia mallei through genome reduction and large-scale rearrangements.

Losada L, Ronning CM, DeShazer D, Woods D, Fedorova N, Kim HS, Shabalina SA, Pearson TR, Brinkac L, Tan P, Nandi T, Crabtree J, Badger J, Beckstrom-Sternberg S, Saqib M, Schutzer SE, Keim P, Nierman WC.

Genome Biol Evol. 2010 Jan 22;2:102-16. doi: 10.1093/gbe/evq003.

35.

The Protein Naming Utility: a rules database for protein nomenclature.

Goll J, Montgomery R, Brinkac LM, Schobel S, Harkins DM, Sebastian Y, Shrivastava S, Durkin S, Sutton G.

Nucleic Acids Res. 2010 Jan;38(Database issue):D336-9. doi: 10.1093/nar/gkp958. Epub 2009 Dec 8.

36.

Pathema: a clade-specific bioinformatics resource center for pathogen research.

Brinkac LM, Davidsen T, Beck E, Ganapathy A, Caler E, Dodson RJ, Durkin AS, Harkins DM, Lorenzi H, Madupu R, Sebastian Y, Shrivastava S, Thiagarajan M, Orvis J, Sundaram JP, Crabtree J, Galens K, Zhao Y, Inman JM, Montgomery R, Schobel S, Galinsky K, Tanenbaum DM, Resnick A, Zafar N, White O, Sutton G.

Nucleic Acids Res. 2010 Jan;38(Database issue):D408-14. doi: 10.1093/nar/gkp850. Epub 2009 Oct 20.

37.

Genome degradation in Brucella ovis corresponds with narrowing of its host range and tissue tropism.

Tsolis RM, Seshadri R, Santos RL, Sangari FJ, Lobo JM, de Jong MF, Ren Q, Myers G, Brinkac LM, Nelson WC, Deboy RT, Angiuoli S, Khouri H, Dimitrov G, Robinson JR, Mulligan S, Walker RL, Elzer PE, Hassan KA, Paulsen IT.

PLoS One. 2009;4(5):e5519. doi: 10.1371/journal.pone.0005519. Epub 2009 May 13.

38.

Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.

Ward NL, Challacombe JF, Janssen PH, Henrissat B, Coutinho PM, Wu M, Xie G, Haft DH, Sait M, Badger J, Barabote RD, Bradley B, Brettin TS, Brinkac LM, Bruce D, Creasy T, Daugherty SC, Davidsen TM, DeBoy RT, Detter JC, Dodson RJ, Durkin AS, Ganapathy A, Gwinn-Giglio M, Han CS, Khouri H, Kiss H, Kothari SP, Madupu R, Nelson KE, Nelson WC, Paulsen I, Penn K, Ren Q, Rosovitz MJ, Selengut JD, Shrivastava S, Sullivan SA, Tapia R, Thompson LS, Watkins KL, Yang Q, Yu C, Zafar N, Zhou L, Kuske CR.

Appl Environ Microbiol. 2009 Apr;75(7):2046-56. doi: 10.1128/AEM.02294-08. Epub 2009 Feb 5.

39.

Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus.

Badger JH, Hoover TR, Brun YV, Weiner RM, Laub MT, Alexandre G, Mrázek J, Ren Q, Paulsen IT, Nelson KE, Khouri HM, Radune D, Sosa J, Dodson RJ, Sullivan SA, Rosovitz MJ, Madupu R, Brinkac LM, Durkin AS, Daugherty SC, Kothari SP, Giglio MG, Zhou L, Haft DH, Selengut JD, Davidsen TM, Yang Q, Zafar N, Ward NL.

J Bacteriol. 2006 Oct;188(19):6841-50.

40.

Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment.

Palenik B, Ren Q, Dupont CL, Myers GS, Heidelberg JF, Badger JH, Madupu R, Nelson WC, Brinkac LM, Dodson RJ, Durkin AS, Daugherty SC, Sullivan SA, Khouri H, Mohamoud Y, Halpin R, Paulsen IT.

Proc Natl Acad Sci U S A. 2006 Sep 5;103(36):13555-9. Epub 2006 Aug 25.

41.

Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens.

Myers GS, Rasko DA, Cheung JK, Ravel J, Seshadri R, DeBoy RT, Ren Q, Varga J, Awad MM, Brinkac LM, Daugherty SC, Haft DH, Dodson RJ, Madupu R, Nelson WC, Rosovitz MJ, Sullivan SA, Khouri H, Dimitrov GI, Watkins KL, Mulligan S, Benton J, Radune D, Fisher DJ, Atkins HS, Hiscox T, Jost BH, Billington SJ, Songer JG, McClane BA, Titball RW, Rood JI, Melville SB, Paulsen IT.

Genome Res. 2006 Aug;16(8):1031-40. Epub 2006 Jul 6.

42.

Comparative genomics of emerging human ehrlichiosis agents.

Dunning Hotopp JC, Lin M, Madupu R, Crabtree J, Angiuoli SV, Eisen JA, Seshadri R, Ren Q, Wu M, Utterback TR, Smith S, Lewis M, Khouri H, Zhang C, Niu H, Lin Q, Ohashi N, Zhi N, Nelson W, Brinkac LM, Dodson RJ, Rosovitz MJ, Sundaram J, Daugherty SC, Davidsen T, Durkin AS, Gwinn M, Haft DH, Selengut JD, Sullivan SA, Zafar N, Zhou L, Benahmed F, Forberger H, Halpin R, Mulligan S, Robinson J, White O, Rikihisa Y, Tettelin H.

PLoS Genet. 2006 Feb;2(2):e21. Epub 2006 Feb 17. Erratum in: PLoS Genet. 2006 Dec;2(12):e213. Eisen, Jonathan [corrected to Eisen, Jonathan A].

43.

Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901.

Wu M, Ren Q, Durkin AS, Daugherty SC, Brinkac LM, Dodson RJ, Madupu R, Sullivan SA, Kolonay JF, Haft DH, Nelson WC, Tallon LJ, Jones KM, Ulrich LE, Gonzalez JM, Zhulin IB, Robb FT, Eisen JA.

PLoS Genet. 2005 Nov;1(5):e65. Epub 2005 Nov 25. Erratum in: PLoS Genet. 2006 Apr;2(4):e60. Haft, Daniel H [added].

44.

Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome".

Tettelin H, Masignani V, Cieslewicz MJ, Donati C, Medini D, Ward NL, Angiuoli SV, Crabtree J, Jones AL, Durkin AS, Deboy RT, Davidsen TM, Mora M, Scarselli M, Margarit y Ros I, Peterson JD, Hauser CR, Sundaram JP, Nelson WC, Madupu R, Brinkac LM, Dodson RJ, Rosovitz MJ, Sullivan SA, Daugherty SC, Haft DH, Selengut J, Gwinn ML, Zhou L, Zafar N, Khouri H, Radune D, Dimitrov G, Watkins K, O'Connor KJ, Smith S, Utterback TR, White O, Rubens CE, Grandi G, Madoff LC, Kasper DL, Telford JL, Wessels MR, Rappuoli R, Fraser CM.

Proc Natl Acad Sci U S A. 2005 Sep 27;102(39):13950-5. Epub 2005 Sep 19. Erratum in: Proc Natl Acad Sci U S A. 2005 Nov 8;102(45):16530.

45.

Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition.

Joardar V, Lindeberg M, Jackson RW, Selengut J, Dodson R, Brinkac LM, Daugherty SC, Deboy R, Durkin AS, Giglio MG, Madupu R, Nelson WC, Rosovitz MJ, Sullivan S, Crabtree J, Creasy T, Davidsen T, Haft DH, Zafar N, Zhou L, Halpin R, Holley T, Khouri H, Feldblyum T, White O, Fraser CM, Chatterjee AK, Cartinhour S, Schneider DJ, Mansfield J, Collmer A, Buell CR.

J Bacteriol. 2005 Sep;187(18):6488-98.

46.

The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.

Methé BA, Nelson KE, Deming JW, Momen B, Melamud E, Zhang X, Moult J, Madupu R, Nelson WC, Dodson RJ, Brinkac LM, Daugherty SC, Durkin AS, DeBoy RT, Kolonay JF, Sullivan SA, Zhou L, Davidsen TM, Wu M, Huston AL, Lewis M, Weaver B, Weidman JF, Khouri H, Utterback TR, Feldblyum TV, Fraser CM.

Proc Natl Acad Sci U S A. 2005 Aug 2;102(31):10913-8. Epub 2005 Jul 25.

47.

Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5.

Paulsen IT, Press CM, Ravel J, Kobayashi DY, Myers GS, Mavrodi DV, DeBoy RT, Seshadri R, Ren Q, Madupu R, Dodson RJ, Durkin AS, Brinkac LM, Daugherty SC, Sullivan SA, Rosovitz MJ, Gwinn ML, Zhou L, Schneider DJ, Cartinhour SW, Nelson WC, Weidman J, Watkins K, Tran K, Khouri H, Pierson EA, Pierson LS 3rd, Thomashow LS, Loper JE.

Nat Biotechnol. 2005 Jul;23(7):873-8. Epub 2005 Jun 26. Erratum in: Nat Biotechnol. 2006 Apr;24(4):466.

PMID:
15980861
48.

Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain.

Gill SR, Fouts DE, Archer GL, Mongodin EF, Deboy RT, Ravel J, Paulsen IT, Kolonay JF, Brinkac L, Beanan M, Dodson RJ, Daugherty SC, Madupu R, Angiuoli SV, Durkin AS, Haft DH, Vamathevan J, Khouri H, Utterback T, Lee C, Dimitrov G, Jiang L, Qin H, Weidman J, Tran K, Kang K, Hance IR, Nelson KE, Fraser CM.

J Bacteriol. 2005 Apr;187(7):2426-38.

49.

Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species.

Fouts DE, Mongodin EF, Mandrell RE, Miller WG, Rasko DA, Ravel J, Brinkac LM, DeBoy RT, Parker CT, Daugherty SC, Dodson RJ, Durkin AS, Madupu R, Sullivan SA, Shetty JU, Ayodeji MA, Shvartsbeyn A, Schatz MC, Badger JH, Fraser CM, Nelson KE.

PLoS Biol. 2005 Jan;3(1):e15. Epub 2005 Jan 4.

50.

Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes.

Seshadri R, Adrian L, Fouts DE, Eisen JA, Phillippy AM, Methe BA, Ward NL, Nelson WC, Deboy RT, Khouri HM, Kolonay JF, Dodson RJ, Daugherty SC, Brinkac LM, Sullivan SA, Madupu R, Nelson KE, Kang KH, Impraim M, Tran K, Robinson JM, Forberger HA, Fraser CM, Zinder SH, Heidelberg JF.

Science. 2005 Jan 7;307(5706):105-8.

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