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Items: 50

1.

Gene expression profile of human T cells following a single stimulation of peripheral blood mononuclear cells with anti-CD3 antibodies.

Sousa IG, Simi KCR, do Almo MM, Bezerra MAG, Doose G, Raiol T, Stadler PF, Hoffmann S, Maranhão AQ, Brigido MM.

BMC Genomics. 2019 Jul 19;20(1):593. doi: 10.1186/s12864-019-5967-8.

2.

Mucosal delivery of Lactococcus lactis carrying an anti-TNF scFv expression vector ameliorates experimental colitis in mice.

Chiabai MJ, Almeida JF, de Azevedo MGD, Fernandes SS, Pereira VB, de Castro RJA, Jerônimo MS, Sousa IG, de Souza Vianna LM, Miyoshi A, Bocca AL, Maranhão AQ, Brigido MM.

BMC Biotechnol. 2019 Jun 25;19(1):38. doi: 10.1186/s12896-019-0518-6.

3.

Phylogenetic diversity of aerobic spore-forming Bacillalles isolated from Brazilian soils.

Orem JC, Silva WMC, Raiol T, Magalhães MI, Martins PH, Cavalcante DA, Kruger RH, Brigido MM, De-Souza MT.

Int Microbiol. 2019 May 2. doi: 10.1007/s10123-019-00080-6. [Epub ahead of print]

PMID:
31049768
4.

Live neighbor-joining.

Telles GP, Araújo GS, Walter MEMT, Brigido MM, Almeida NF.

BMC Bioinformatics. 2018 May 16;19(1):172. doi: 10.1186/s12859-018-2162-x.

5.

A Support Vector Machine based method to distinguish long non-coding RNAs from protein coding transcripts.

Schneider HW, Raiol T, Brigido MM, Walter MEMT, Stadler PF.

BMC Genomics. 2017 Oct 18;18(1):804. doi: 10.1186/s12864-017-4178-4.

6.

MicroRNA expression profiles in human CD3+ T cells following stimulation with anti-human CD3 antibodies.

Sousa IG, do Almo MM, Simi KC, Bezerra MA, Andrade RV, Maranhão AQ, Brigido MM.

BMC Res Notes. 2017 Mar 14;10(1):124. doi: 10.1186/s13104-017-2442-y.

7.

Characterization of an In Vivo Z-DNA Detection Probe Based on a Cell Nucleus Accumulating Intrabody.

Gulis G, Silva IC, Sousa HR, Sousa IG, Bezerra MA, Quilici LS, Maranhao AQ, Brigido MM.

Mol Biotechnol. 2016 Sep;58(8-9):585-94. doi: 10.1007/s12033-016-9958-6.

PMID:
27351554
8.

Knowledge-based reasoning to annotate noncoding RNA using multi-agent system.

Arruda WC, Souza DS, Ralha CG, Walter ME, Raiol T, Brigido MM, Stadler PF.

J Bioinform Comput Biol. 2015 Dec;13(6):1550021. doi: 10.1142/S0219720015500213. Epub 2015 Jun 24.

PMID:
26223200
9.

Identification and characterization of expressed retrotransposons in the genome of the Paracoccidioides species complex.

Soares MA, de Carvalho Araújo RA, Marini MM, de Oliveira LM, de Lima LG, de Souza Alves V, Felipe MS, Brigido MM, de Almeida Soares CM, da Silveira JF, Ruiz JC, Cisalpino PS.

BMC Genomics. 2015 May 12;16:376. doi: 10.1186/s12864-015-1564-7.

10.

Draft Genome Sequence of FT9, a Novel Bacillus cereus Strain Isolated from a Brazilian Thermal Spring.

Raiol T, De-Souza MT, Oliveira JV, Silva HS, Orem JC, Cavalcante DA, Almeida NF, Telles GP, Setubal JC, Brigido MM, Torres FA, Stadler PS, Walter ME, Moraes LM.

Genome Announc. 2014 Oct 9;2(5). pii: e01027-14. doi: 10.1128/genomeA.01027-14.

11.

Optimization of heterologous protein production in Chinese hamster ovary cells under overexpression of spliced form of human X-box binding protein.

Gulis G, Simi KC, de Toledo RR, Maranhao AQ, Brigido MM.

BMC Biotechnol. 2014 Apr 11;14:26. doi: 10.1186/1472-6750-14-26.

12.

A mouse variable gene fragment binds to DNA independently of the BCR context: a possible role for immature B-cell repertoire establishment.

Maranhão AQ, Costa MB, Guedes L, Moraes-Vieira PM, Raiol T, Brigido MM.

PLoS One. 2013 Sep 2;8(9):e72625. doi: 10.1371/journal.pone.0072625. eCollection 2013.

13.

A minimal cytomegalovirus intron A variant can improve transgene expression in different mammalian cell lines.

Quilici LS, Silva-Pereira I, Andrade AC, Albuquerque FC, Brigido MM, Maranhão AQ.

Biotechnol Lett. 2013 Jan;35(1):21-7. doi: 10.1007/s10529-012-1043-z. Epub 2012 Sep 7.

PMID:
22955677
14.

Clustering rfam 10.1: clans, families, and classes.

Lessa FA, Raiol T, Brigido MM, Martins Neto DS, Walter ME, Stadler PF.

Genes (Basel). 2012 Jul 5;3(3):378-90. doi: 10.3390/genes3030378.

15.

Comparative genomic analysis of human fungal pathogens causing paracoccidioidomycosis.

Desjardins CA, Champion MD, Holder JW, Muszewska A, Goldberg J, Bailão AM, Brigido MM, Ferreira ME, Garcia AM, Grynberg M, Gujja S, Heiman DI, Henn MR, Kodira CD, León-Narváez H, Longo LV, Ma LJ, Malavazi I, Matsuo AL, Morais FV, Pereira M, Rodríguez-Brito S, Sakthikumar S, Salem-Izacc SM, Sykes SM, Teixeira MM, Vallejo MC, Walter ME, Yandava C, Young S, Zeng Q, Zucker J, Felipe MS, Goldman GH, Haas BJ, McEwen JG, Nino-Vega G, Puccia R, San-Blas G, Soares CM, Birren BW, Cuomo CA.

PLoS Genet. 2011 Oct;7(10):e1002345. doi: 10.1371/journal.pgen.1002345. Epub 2011 Oct 27.

16.

Dendritic cells transfected with scFv from Mab 7.B12 mimicking original antigen gp43 induces protection against experimental Paracoccidioidomycosis.

Ferreira KS, Maranhão AQ, Garcia MC, Brígido MM, Santos SS, Lopes JD, Almeida SR.

PLoS One. 2011 Jan 7;6(1):e15935. doi: 10.1371/journal.pone.0015935.

17.

Accumulation of functional recombinant human coagulation factor IX in transgenic soybean seeds.

Cunha NB, Murad AM, Ramos GL, Maranhão AQ, Brígido MM, Araújo AC, Lacorte C, Aragão FJ, Covas DT, Fontes AM, Souza GH, Vianna GR, Rech EL.

Transgenic Res. 2011 Aug;20(4):841-55. doi: 10.1007/s11248-010-9461-y. Epub 2010 Nov 11.

PMID:
21069460
18.

Comparison of humanized IgG and FvFc anti-CD3 monoclonal antibodies expressed in CHO cells.

Serpieri F, Inocencio A, de Oliveira JM, Pimenta AA Jr, Garbuio A, Kalil J, Brigido MM, Moro AM.

Mol Biotechnol. 2010 Jul;45(3):218-25. doi: 10.1007/s12033-010-9269-2.

PMID:
20336495
19.

Isolation of osteosarcoma-associated human antibodies from a combinatorial Fab phage display library.

Dantas-Barbosa C, Faria FP, Brigido MM, Maranhão AQ.

J Biomed Biotechnol. 2009;2009:157531. doi: 10.1155/2009/157531. Epub 2009 Dec 16.

20.

Novel humanized anti-CD3 antibodies induce a predominantly immunoregulatory profile in human peripheral blood mononuclear cells.

Silva HM, Vieira PM, Costa PL, Pimentel BM, Moro AM, Kalil J, Maranhão AQ, Coelho V, Brigido MM.

Immunol Lett. 2009 Aug 15;125(2):129-36. doi: 10.1016/j.imlet.2009.06.009. Epub 2009 Jun 30.

PMID:
19573559
21.

Characterization of hantaviruses circulating in Central Brazil.

Melo-Silva CR, Maranhão AQ, Nagasse-Sugahara TK, Bisordi I, Suzuki A, Brigido MM.

Infect Genet Evol. 2009 Mar;9(2):241-7. doi: 10.1016/j.meegid.2008.11.008. Epub 2008 Dec 6.

PMID:
19103306
22.

Expression of functional recombinant human factor IX in milk of mice.

Lisauskas SF, Cunha NB, Vianna GR, Mendes EA, Ramos GL, Maranhão AQ, Brígido MM, Almeida JO, Baptista HA, Motta FL, Pesquero JB, Aragão FJ, Rech EL.

Biotechnol Lett. 2008 Dec;30(12):2063-9. doi: 10.1007/s10529-008-9818-y. Epub 2008 Aug 8.

PMID:
18688573
23.

Production of recombinant human factor VIII in different cell lines and the effect of human XBP1 co-expression.

Campos-da-Paz M, Costa CS, Quilici LS, de Carmo Simões I, Kyaw CM, Maranhão AQ, Brigido MM.

Mol Biotechnol. 2008 Jun;39(2):155-8. doi: 10.1007/s12033-008-9055-6.

PMID:
18327549
24.

HIV type 1 genetic variability in central Brazil.

Véras NM, Véras VS, Ramalho ED, Kyaw C, Silva RR, Brígido MM, Martins CR.

AIDS Res Hum Retroviruses. 2007 Dec;23(12):1481-90.

PMID:
18160005
25.

Production of a recombinant Fab in Pichia pastoris from a Monocistronic expression vector.

Burtet RT, Santos-Silva MA, Buss GA, Moraes LM, Maranhão AQ, Brigido MM.

J Biochem. 2007 Dec;142(6):665-9. Epub 2007 Nov 24.

PMID:
18037691
26.

Guarana (Paullinia cupana var. sorbilis), an anciently consumed stimulant from the Amazon rain forest: the seeded-fruit transcriptome.

Angelo PC, Nunes-Silva CG, Brígido MM, Azevedo JS, Assunção EN, Sousa AR, Patrício FJ, Rego MM, Peixoto JC, Oliveira WP Jr, Freitas DV, Almeida ER, Viana AM, Souza AF, Andrade EV, Acosta PO, Batista JS, Walter ME, Leomil L, Anjos DA, Coimbra RC, Barbosa MH, Honda E, Pereira SS, Silva A, Pereira JO, Silva ML, Marins M, Holanda FJ, Abreu RM, Pando SC, Gonçalves JF, Carvalho ML, Leal-Mesquita ER, da Silveira MA, Batista WC, Atroch AL, França SC, Porto JI, Schneider MP, Astolfi-Filho S; Brazilian Amazon Consortium for Genomic Research (REALGENE).

Plant Cell Rep. 2008 Jan;27(1):117-24. Epub 2007 Oct 5.

PMID:
17917729
27.

Early transcriptional response of Paracoccidioides brasiliensis upon internalization by murine macrophages.

Tavares AH, Silva SS, Dantas A, Campos EG, Andrade RV, Maranhão AQ, Brígido MM, Passos-Silva DG, Fachin AL, Teixeira SM, Passos GA, Soares CM, Bocca AL, Carvalho MJ, Silva-Pereira I, Felipe MS.

Microbes Infect. 2007 Apr;9(5):583-90. Epub 2007 Feb 20.

PMID:
17387029
28.

Cell organisation, sulphur metabolism and ion transport-related genes are differentially expressed in Paracoccidioides brasiliensis mycelium and yeast cells.

Andrade RV, Paes HC, Nicola AM, de Carvalho MJ, Fachin AL, Cardoso RS, Silva SS, Fernandes L, Silva SP, Donadi EA, Sakamoto-Hojo ET, Passos GA, Soares CM, Brígido MM, Felipe MS.

BMC Genomics. 2006 Aug 14;7:208.

29.

Overview and perspectives the transcriptome of Paracoccidioides brasiliensis.

Andrade RV, Da Silva SP, Torres FA, Poças-Fonseca MJ, Silva-Pereira I, Maranhão AQ, Campos EG, Moraes LM, Jesuíno RS, Pereira M, Soares CM, Walter ME, Carvalho MJ, Almeida NF, Brigido MM, Felipe MS.

Rev Iberoam Micol. 2005 Dec;22(4):203-12.

30.

Thermodynamic basis for antibody binding to Z-DNA: comparison of a monoclonal antibody and its recombinant derivatives.

Vaz de Andrade E, Freitas SM, Ventura MM, Maranhão AQ, Brigido MM.

Biochim Biophys Acta. 2005 Nov 30;1726(3):293-301. Epub 2005 Sep 15.

PMID:
16214293
31.

Bioinformatics of the Paracoccidioides brasiliensis EST Project.

Brígido MM, Walter ME, Oliveira AG, Inoue MK, Anjos DS, Sandes EF, Gondim JJ, Carvalho MJ, Almeida NF Jr, Felipe MS.

Genet Mol Res. 2005 Jun 30;4(2):203-15.

32.

Construction of a human Fab phage display library from antibody repertoires of osteosarcoma patients.

Dantas-Barbosa C, Brígido MM, Maranhão AQ.

Genet Mol Res. 2005 Jun 30;4(2):126-40.

33.

Swine and poultry pathogens: the complete genome sequences of two strains of Mycoplasma hyopneumoniae and a strain of Mycoplasma synoviae.

Vasconcelos AT, Ferreira HB, Bizarro CV, Bonatto SL, Carvalho MO, Pinto PM, Almeida DF, Almeida LG, Almeida R, Alves-Filho L, Assunção EN, Azevedo VA, Bogo MR, Brigido MM, Brocchi M, Burity HA, Camargo AA, Camargo SS, Carepo MS, Carraro DM, de Mattos Cascardo JC, Castro LA, Cavalcanti G, Chemale G, Collevatti RG, Cunha CW, Dallagiovanna B, Dambrós BP, Dellagostin OA, Falcão C, Fantinatti-Garboggini F, Felipe MS, Fiorentin L, Franco GR, Freitas NS, Frías D, Grangeiro TB, Grisard EC, Guimarães CT, Hungria M, Jardim SN, Krieger MA, Laurino JP, Lima LF, Lopes MI, Loreto EL, Madeira HM, Manfio GP, Maranhão AQ, Martinkovics CT, Medeiros SR, Moreira MA, Neiva M, Ramalho-Neto CE, Nicolás MF, Oliveira SC, Paixão RF, Pedrosa FO, Pena SD, Pereira M, Pereira-Ferrari L, Piffer I, Pinto LS, Potrich DP, Salim AC, Santos FR, Schmitt R, Schneider MP, Schrank A, Schrank IS, Schuck AF, Seuanez HN, Silva DW, Silva R, Silva SC, Soares CM, Souza KR, Souza RC, Staats CC, Steffens MB, Teixeira SM, Urmenyi TP, Vainstein MH, Zuccherato LW, Simpson AJ, Zaha A.

J Bacteriol. 2005 Aug;187(16):5568-77.

34.

Functional genome of the human pathogenic fungus Paracoccidioides brasiliensis.

Felipe MS, Torres FA, Maranhão AQ, Silva-Pereira I, Poças-Fonseca MJ, Campos EG, Moraes LM, Arraes FB, Carvalho MJ, Andrade RV, Nicola AM, Teixeira MM, Jesuíno RS, Pereira M, Soares CM, Brígido MM.

FEMS Immunol Med Microbiol. 2005 Sep 1;45(3):369-81. Review.

35.

Transcriptional profiles of the human pathogenic fungus Paracoccidioides brasiliensis in mycelium and yeast cells.

Felipe MS, Andrade RV, Arraes FB, Nicola AM, Maranhão AQ, Torres FA, Silva-Pereira I, Poças-Fonseca MJ, Campos EG, Moraes LM, Andrade PA, Tavares AH, Silva SS, Kyaw CM, Souza DP, Pereira M, Jesuíno RS, Andrade EV, Parente JA, Oliveira GS, Barbosa MS, Martins NF, Fachin AL, Cardoso RS, Passos GA, Almeida NF, Walter ME, Soares CM, Carvalho MJ, Brígido MM; PbGenome Network.

J Biol Chem. 2005 Jul 1;280(26):24706-14. Epub 2005 Apr 22.

36.

Antiretroviral resistance and genetic diversity of human immunodeficiency virus type 1 isolates from the Federal District, Central Brazil.

Cerqueira DM, Amorim RM, Silva RR, Camara GN, Brígido MM, Martins CR.

Mem Inst Oswaldo Cruz. 2004 Dec;99(8):877-82. Epub 2005 Mar 4.

37.

Prevalence of human papillomavirus type 16 variants in the Federal District, Central Brazil.

Cruz MR, Cerqueira DM, Cruz WB, Camara GN, Brígido MM, Silva EO, Carvalho LG, Martins CR.

Mem Inst Oswaldo Cruz. 2004 May;99(3):281-2. Epub 2004 Jul 19.

38.

Pbhyd1 and Pbhyd2: two mycelium-specific hydrophobin genes from the dimorphic fungus Paracoccidioides brasiliensis.

Albuquerque P, Kyaw CM, Saldanha RR, Brigido MM, Felipe MS, Silva-Pereira I.

Fungal Genet Biol. 2004 May;41(5):510-20.

PMID:
15050540
39.

Evidence for the presence of a type III secretion system in diffusely adhering Escherichia coli (DAEC).

Kyaw CM, De Araujo CR, Lima MR, Gondim EG, Brígido MM, Giugliano LG.

Infect Genet Evol. 2003 Jul;3(2):111-7.

PMID:
12809805
40.

Humanization of the anti-CD18 antibody 6.7: an unexpected effect of a framework residue in binding to antigen.

Caldas C, Coelho V, Kalil J, Moro AM, Maranhão AQ, Brígido MM.

Mol Immunol. 2003 May;39(15):941-52.

PMID:
12695120
41.

Transcriptome characterization of the dimorphic and pathogenic fungus Paracoccidioides brasiliensis by EST analysis.

Felipe MS, Andrade RV, Petrofeza SS, Maranhão AQ, Torres FA, Albuquerque P, Arraes FB, Arruda M, Azevedo MO, Baptista AJ, Bataus LA, Borges CL, Campos EG, Cruz MR, Daher BS, Dantas A, Ferreira MA, Ghil GV, Jesuino RS, Kyaw CM, Leitão L, Martins CR, Moraes LM, Neves EO, Nicola AM, Alves ES, Parente JA, Pereira M, Poças-Fonseca MJ, Resende R, Ribeiro BM, Saldanha RR, Santos SC, Silva-Pereira I, Silva MA, Silveira E, Simões IC, Soares RB, Souza DP, De-Souza MT, Andrade EV, Xavier MA, Veiga HP, Venancio EJ, Carvalho MJ, Oliveira AG, Inoue MK, Almeida NF, Walter ME, Soares CM, Brígido MM.

Yeast. 2003 Feb;20(3):263-71.

42.

Single-chain Fv with Fc fragment of the human IgG1 tag: construction, Pichia pastoris expression and antigen binding characterization.

Andrade EV, Albuquerque FC, Moraes LM, Brígido MM, Santos-Silva MA.

J Biochem. 2000 Dec;128(6):891-5.

43.

Design and synthesis of germline-based hemi-humanized single-chain Fv against the CD18 surface antigen.

Caldas C, Coelho VP, Rigden DJ, Neschich G, Moro AM, Brígido MM.

Protein Eng. 2000 May;13(5):353-60.

PMID:
10835109
44.

Expression of anti-Z-DNA single chain antibody variable fragment on the filamentous phage surface.

Maranhão AQ, Brígido MM.

Braz J Med Biol Res. 2000 May;33(5):569-79.

45.

Molecular cloning and characterization of a glucan synthase gene from the human pathogenic fungus Paracoccidioides brasiliensis.

Pereira M, Felipe MS, Brígido MM, Soares CM, Azevedo MO.

Yeast. 2000 Mar 30;16(5):451-62.

46.
47.

Humicola grisea var. thermoidea cbh1.2: A new gene in the family of cellobiohydrolases is expressed and encodes a cellulose-binding domain-less enzyme.

Pocas-Fonseca MJ, Lima BD, Brigido MM, Silva-Pereira I, Felipe MS, Radford A, Azevedo MO.

J Gen Appl Microbiol. 1997 Apr;43(2):115-120. No abstract available.

48.

The targets and genes for antibodies to Z-DNA.

Polymenis M, Brigido MM, Sanford DG, Stollar BD.

Biotechnol Appl Biochem. 1993 Oct;18(2):175-83. Review.

PMID:
7504495
49.
50.

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