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Adaptive Immune Resistance to Intravesical BCG in Non-Muscle Invasive Bladder Cancer: Implications for Prospective BCG-Unresponsive Trials.

Kates M, Matoso A, Choi W, Baras AS, Daniels MJ, Lombardo K, Brant A, Mikkilineni N, McConkey DJ, Kamat AM, Svatek RS, Porten SP, Meeks JJ, Lerner SP, Dinney CP, Black PC, McKiernan JM, Anderson C, Drake CG, Bivalacqua TJ.

Clin Cancer Res. 2020 Feb 15;26(4):882-891. doi: 10.1158/1078-0432.CCR-19-1920. Epub 2019 Nov 11.


High-quality MS/MS spectrum prediction for data-dependent and data-independent acquisition data analysis.

Tiwary S, Levy R, Gutenbrunner P, Salinas Soto F, Palaniappan KK, Deming L, Berndl M, Brant A, Cimermancic P, Cox J.

Nat Methods. 2019 Jun;16(6):519-525. doi: 10.1038/s41592-019-0427-6. Epub 2019 May 27.


HPV18 Utilizes Two Alternative Branch Sites for E6*I Splicing to Produce E7 Protein.

Brant AC, Majerciak V, Moreira MAM, Zheng ZM.

Virol Sin. 2019 Apr;34(2):211-221. doi: 10.1007/s12250-019-00098-0. Epub 2019 Apr 3.


False News of a Cannabis Cancer Cure.

Shi S, Brant AR, Sabolch A, Pollom E.

Cureus. 2019 Jan 19;11(1):e3918. doi: 10.7759/cureus.3918.


Experimental and Monte-Carlo characterization of the novel compact ionization chamber PTW 31023 for reference and relative dosimetry in high energy photon beams.

Büsing I, Brant A, Lange T, Delfs B, Poppinga D, Kranzer R, Looe HK, Poppe B.

Z Med Phys. 2019 Dec;29(4):303-313. doi: 10.1016/j.zemedi.2019.02.002. Epub 2019 Mar 14.


Prognostic implications of prostatic urethral involvement in non-muscle-invasive bladder cancer.

Brant A, Daniels M, Chappidi MR, Joice GA, Sopko NA, Matoso A, Bivalacqua TJ, Kates M.

World J Urol. 2019 Dec;37(12):2683-2689. doi: 10.1007/s00345-019-02673-2. Epub 2019 Mar 8.


Characterization of HPV integration, viral gene expression and E6E7 alternative transcripts by RNA-Seq: A descriptive study in invasive cervical cancer.

Brant AC, Menezes AN, Felix SP, de Almeida LM, Sammeth M, Moreira MAM.

Genomics. 2019 Dec;111(6):1853-1861. doi: 10.1016/j.ygeno.2018.12.008. Epub 2018 Dec 13.


Patient Decision-making and Predictors of Genital Satisfaction Associated With Testicular Prostheses After Radical Orchiectomy: A Questionnaire-based Study of Men With Germ Cell Tumors of the Testicle.

Nichols PE, Harris KT, Brant A, Manka MG, Haney N, Johnson MH, Herati A, Allaf ME, Pierorazio PM.

Urology. 2019 Feb;124:276-281. doi: 10.1016/j.urology.2018.09.021. Epub 2018 Oct 28.


Feasibility and reliability of clinical coding surveillance for the routine monitoring of adverse drug events in New Zealand hospitals.

Ng J, Andrew P, Muir P, Greene M, Mohan S, Knight J, Hider P, Davis P, Seddon M, Scahill S, Harrison J, Zhou L, Selak V, Lawes C, Galgali G, Broad J, Crawley M, Pevreal W, Houston N, Brott T, Ryan D, Peach J, Brant A, Bramley D.

N Z Med J. 2018 Oct 26;131(1484):46-60.


The polarity effect of compact ionization chambers used for small field dosimetry.

Looe HK, Büsing I, Tekin T, Brant A, Delfs B, Poppinga D, Poppe B.

Med Phys. 2018 Dec;45(12):5608-5621. doi: 10.1002/mp.13227. Epub 2018 Oct 31.


11th GCC Closed Forum: cumulative stability; matrix stability; immunogenicity assays; laboratory manuals; biosimilars; chiral methods; hybrid LBA/LCMS assays; fit-for-purpose validation; China Food and Drug Administration bioanalytical method validation.

Islam R, Briscoe C, Bower J, Cape S, Arnold M, Hayes R, Warren M, Karnik S, Stouffer B, Xiao YQ, van der Strate B, Sikkema D, Fang X, Tudoroniu A, Tayyem R, Brant A, Spriggs F, Barry C, Khan M, Keyhani A, Zimmer J, Caturla MC, Couerbe P, Khadang A, Bourdage J, Datin J, Zemo J, Hughes N, Fatmi S, Sheldon C, Fountain S, Satterwhite C, Colletti K, Vija J, Yu M, Stamatopoulos J, Lin J, Wilfahrt J, Dinan A, Ohorodnik S, Hulse J, Patel V, Garofolo W, Savoie N, Brown M, Papac D, Buonarati M, Hristopoulos G, Beaver C, Boudreau N, Williard C, Liu Y, Ray G, Warrino D, Xu A, Green R, Hayward-Sewell J, Marcelletti J, Sanchez C, Kennedy M, Charles JS, Bouhajib M, Nehls C, Tabler E, Tu J, Joyce P, Iordachescu A, DuBey I, Lindsay J, Yamashita J, Wells E.

Bioanalysis. 2018 Apr 1;10(7):433-444. doi: 10.4155/bio-2018-0014. Epub 2018 Apr 27.


Screening for germline mutations in mismatch repair genes in patients with Lynch syndrome by next generation sequencing.

Soares BL, Brant AC, Gomes R, Pastor T, Schneider NB, Ribeiro-Dos-Santos Â, de Assumpção PP, Achatz MIW, Ashton-Prolla P, Moreira MAM.

Fam Cancer. 2018 Jul;17(3):387-394. doi: 10.1007/s10689-017-0043-5.


Lack of association between the pancreatitis risk allele CEL-HYB and pancreatic cancer.

Shindo K, Yu J, Suenaga M, Fesharakizadeh S, Tamura K, Almario JAN, Brant A, Borges M, Siddiqui A, Datta L, Wolfgang CL, Hruban RH, Klein AP, Goggins M.

Oncotarget. 2017 Feb 7;8(31):50824-50831. doi: 10.18632/oncotarget.15137. eCollection 2017 Aug 1.


High dose-rate Intra-Operative Radiation Therapy During High Risk Genitourinary Surgery: Initial Observations and a Proposal for its Study in Bladder Cancer.

Kates M, Chappidi MR, Brant A, Milbar N, Sopko NA, Meyer C, Terezakis SA, Herman JM, Efron JE, Safar B, Tran PT, Ahuja N, Pierorazio PM, Bivalacqua TJ.

Bladder Cancer. 2017 Jul 27;3(3):191-199. doi: 10.3233/BLC-170104.


Deleterious Germline Mutations in Patients With Apparently Sporadic Pancreatic Adenocarcinoma.

Shindo K, Yu J, Suenaga M, Fesharakizadeh S, Cho C, Macgregor-Das A, Siddiqui A, Witmer PD, Tamura K, Song TJ, Navarro Almario JA, Brant A, Borges M, Ford M, Barkley T, He J, Weiss MJ, Wolfgang CL, Roberts NJ, Hruban RH, Klein AP, Goggins M.

J Clin Oncol. 2017 Oct 20;35(30):3382-3390. doi: 10.1200/JCO.2017.72.3502. Epub 2017 Aug 2.


Duodenal Involvement is an Independent Prognostic Factor for Patients with Surgically Resected Pancreatic Ductal Adenocarcinoma.

Dal Molin M, Blackford AL, Siddiqui A, Brant A, Cho C, Rezaee N, Yu J, He J, Weiss M, Hruban RH, Wolfgang C, Goggins M.

Ann Surg Oncol. 2017 Aug;24(8):2379-2386. doi: 10.1245/s10434-017-5864-9. Epub 2017 Apr 24.


The human retinoblastoma susceptibility gene (RB1): an evolutionary story in primates.

Viana MC, Tavares WC, Brant AC, Boroni M, Seuánez HN.

Mamm Genome. 2017 Jun;28(5-6):198-212. doi: 10.1007/s00335-017-9689-4. Epub 2017 Apr 11.


Methylation at 3'LCR of HPV16 can be affected by patient age and disruption of E1 or E2 genes.

Filho SMA, Bertoni N, Brant AC, Vidal JPCB, Felix SP, Cavalcanti SMB, Carestiato FN, Martins LFL, Almeida LM, Moreira MAM.

Virus Res. 2017 Mar 15;232:48-53. doi: 10.1016/j.virusres.2017.01.022. Epub 2017 Jan 29.


Assessing Cancer Progression and Stable Disease After Neoadjuvant Chemotherapy for Organ-confined Muscle-invasive Bladder Cancer.

Chappidi MR, Kates M, Brant A, Baras AS, Netto GJ, Pierorazio PM, Hahn NM, Bivalacqua TJ.

Urology. 2017 Apr;102:148-158. doi: 10.1016/j.urology.2016.10.064. Epub 2017 Jan 16.


Update on abortion policy.

Conti JA, Brant AR, Shumaker HD, Reeves MF.

Curr Opin Obstet Gynecol. 2016 Dec;28(6):517-521.


Obstructive Sleep Apnea and Pathological Characteristics of Resected Pancreatic Ductal Adenocarcinoma.

Dal Molin M, Brant A, Blackford AL, Griffin JF, Shindo K, Barkley T, Rezaee N, Hruban RH, Wolfgang CL, Goggins M.

PLoS One. 2016 Oct 12;11(10):e0164195. doi: 10.1371/journal.pone.0164195. eCollection 2016.


Pathologic response in patients receiving neoadjuvant chemotherapy for muscle-invasive bladder cancer: Is therapeutic effect owing to chemotherapy or TURBT?

Brant A, Kates M, Chappidi MR, Patel HD, Sopko NA, Netto GJ, Baras AS, Hahn NM, Pierorazio PM, Bivalacqua TJ.

Urol Oncol. 2017 Jan;35(1):34.e17-34.e25. doi: 10.1016/j.urolonc.2016.08.005. Epub 2016 Sep 14.


Digital next-generation sequencing identifies low-abundance mutations in pancreatic juice samples collected from the duodenum of patients with pancreatic cancer and intraductal papillary mucinous neoplasms.

Yu J, Sadakari Y, Shindo K, Suenaga M, Brant A, Almario JAN, Borges M, Barkley T, Fesharakizadeh S, Ford M, Hruban RH, Shin EJ, Lennon AM, Canto MI, Goggins M.

Gut. 2017 Sep;66(9):1677-1687. doi: 10.1136/gutjnl-2015-311166. Epub 2016 Jul 18.


Accuracy of urethral frozen section during radical cystectomy for bladder cancer.

Kates M, Ball MW, Chappidi MR, Baras AS, Gordetsky J, Sopko NA, Brant A, Pierorazio PM, Epstein JI, Schoenberg MP, Bivalacqua TJ.

Urol Oncol. 2016 Dec;34(12):532.e1-532.e6. doi: 10.1016/j.urolonc.2016.06.014. Epub 2016 Jul 16.


Peripherally Inserted Central Catheter Use in Skilled Nursing Facilities: A Pilot Study.

Chopra V, Montoya A, Joshi D, Becker C, Brant A, McGuirk H, Clark J, Harrod M, Kuhn L, Mody L.

J Am Geriatr Soc. 2015 Sep;63(9):1894-9. doi: 10.1111/jgs.13600. Epub 2015 Aug 27.


An infant formula toxicity and toxicokinetic feeding study on carrageenan in preweaning piglets with special attention to the immune system and gastrointestinal tract.

Weiner ML, Ferguson HE, Thorsrud BA, Nelson KG, Blakemore WR, Zeigler B, Cameron MJ, Brant A, Cochrane L, Pellerin M, Mahadevan B.

Food Chem Toxicol. 2015 Mar;77:120-31. doi: 10.1016/j.fct.2014.12.022. Epub 2015 Jan 12.


KRAS and guanine nucleotide-binding protein mutations in pancreatic juice collected from the duodenum of patients at high risk for neoplasia undergoing endoscopic ultrasound.

Eshleman JR, Norris AL, Sadakari Y, Debeljak M, Borges M, Harrington C, Lin E, Brant A, Barkley T, Almario JA, Topazian M, Farrell J, Syngal S, Lee JH, Yu J, Hruban RH, Kanda M, Canto MI, Goggins M.

Clin Gastroenterol Hepatol. 2015 May;13(5):963-9.e4. doi: 10.1016/j.cgh.2014.11.028. Epub 2014 Dec 4.


Carrageenan analysis. Part 3: Quantification in swine plasma.

Blakemore WR, Brant AF, Bissland JG, Bissland ND.

Food Addit Contam Part A Chem Anal Control Expo Risk Assess. 2014;31(10):1673-7. doi: 10.1080/19440049.2014.955538. Epub 2014 Sep 18.


A neural network model of individual differences in task switching abilities.

Herd SA, O'Reilly RC, Hazy TE, Chatham CH, Brant AM, Friedman NP.

Neuropsychologia. 2014 Sep;62:375-89. doi: 10.1016/j.neuropsychologia.2014.04.014. Epub 2014 Apr 30.


Complement deficiencies limit CD20 monoclonal antibody treatment efficacy in CLL.

Middleton O, Cosimo E, Dobbin E, McCaig AM, Clarke C, Brant AM, Leach MT, Michie AM, Wheadon H.

Leukemia. 2015 Jan;29(1):107-14. doi: 10.1038/leu.2014.146. Epub 2014 May 2.


De novo ORFs in Drosophila are important to organismal fitness and evolved rapidly from previously non-coding sequences.

Reinhardt JA, Wanjiru BM, Brant AT, Saelao P, Begun DJ, Jones CD.

PLoS Genet. 2013;9(10):e1003860. doi: 10.1371/journal.pgen.1003860. Epub 2013 Oct 17.


The nature and nurture of high IQ: an extended sensitive period for intellectual development.

Brant AM, Munakata Y, Boomsma DI, Defries JC, Haworth CM, Keller MC, Martin NG, McGue M, Petrill SA, Plomin R, Wadsworth SJ, Wright MJ, Hewitt JK.

Psychol Sci. 2013 Aug;24(8):1487-95. doi: 10.1177/0956797612473119. Epub 2013 Jul 1.


Intrinsic small polarons (Sn³⁺ ions) in photorefractive Sn₂P₂S₆ crystals.

Brant AT, Halliburton LE, Giles NC, Basun SA, Grabar AA, Evans DR.

J Phys Condens Matter. 2013 May 22;25(20):205501. doi: 10.1088/0953-8984/25/20/205501. Epub 2013 Apr 19.


AMP-activated protein kinase and ATP-citrate lyase are two distinct molecular targets for ETC-1002, a novel small molecule regulator of lipid and carbohydrate metabolism.

Pinkosky SL, Filippov S, Srivastava RA, Hanselman JC, Bradshaw CD, Hurley TR, Cramer CT, Spahr MA, Brant AF, Houghton JL, Baker C, Naples M, Adeli K, Newton RS.

J Lipid Res. 2013 Jan;54(1):134-51. doi: 10.1194/jlr.M030528. Epub 2012 Nov 1.


Broadband terahertz pulse emission from ZnGeP2.

Rowley JD, Pierce JK, Brant AT, Halliburton LE, Giles NC, Schunemann PG, Bristow AD.

Opt Lett. 2012 Mar 1;37(5):788-90. doi: 10.1364/OL.37.000788.


Understanding the polarity of ionic liquids.

Ab Rani MA, Brant A, Crowhurst L, Dolan A, Lui M, Hassan NH, Hallett JP, Hunt PA, Niedermeyer H, Perez-Arlandis JM, Schrems M, Welton T, Wilding R.

Phys Chem Chem Phys. 2011 Oct 6;13(37):16831-40. doi: 10.1039/c1cp21262a. Epub 2011 Aug 22.


From an executive network to executive control: a computational model of the n-back task.

Chatham CH, Herd SA, Brant AM, Hazy TE, Miyake A, O'Reilly R, Friedman NP.

J Cogn Neurosci. 2011 Nov;23(11):3598-619. doi: 10.1162/jocn_a_00047. Epub 2011 May 12.


A high-frame-rate ultrasound system for the study of tissue motions.

Baghani A, Brant A, Salcudean S, Rohling R.

IEEE Trans Ultrason Ferroelectr Freq Control. 2010 Jul;57(7):1535-47. doi: 10.1109/TUFFC.2010.1584.


Electrotherapy for neck pain.

Kroeling P, Gross A, Goldsmith CH, Burnie SJ, Haines T, Graham N, Brant A.

Cochrane Database Syst Rev. 2009 Oct 7;(4):CD004251. doi: 10.1002/14651858.CD004251.pub4. Review. Update in: Cochrane Database Syst Rev. 2013;8:CD004251.


Detergent protease exposure and respiratory disease: case-referent analysis of a retrospective cohort.

Brant A, Upchurch S, van Tongeren M, Zekveld C, Helm J, Barnes F, Newman Taylor AJ, Cullinan P.

Occup Environ Med. 2009 Nov;66(11):754-8. doi: 10.1136/oem.2008.043851. Epub 2009 Jun 29.


A twin study of the genetics of high cognitive ability selected from 11,000 twin pairs in six studies from four countries.

Haworth CM, Wright MJ, Martin NW, Martin NG, Boomsma DI, Bartels M, Posthuma D, Davis OS, Brant AM, Corley RP, Hewitt JK, Iacono WG, McGue M, Thompson LA, Hart SA, Petrill SA, Lubinski D, Plomin R.

Behav Genet. 2009 Jul;39(4):359-70. doi: 10.1007/s10519-009-9262-3. Epub 2009 Apr 21.


The developmental etiology of high IQ.

Brant AM, Haberstick BC, Corley RP, Wadsworth SJ, DeFries JC, Hewitt JK.

Behav Genet. 2009 Jul;39(4):393-405. doi: 10.1007/s10519-009-9268-x. Epub 2009 Apr 18.


Chronic retinal detachment with secondary retinal macrocyst and peripheral neovascularization.

Labriola LT, Brant AM, Eller AW.

Semin Ophthalmol. 2009 Jan-Feb;24(1):2-4. doi: 10.1080/08820530802508561.


Physiological, sensory, and functional measures in a model of wrist muscle injury and recovery.

Tiidus PM, Brown L, Brant A, Enns D, Bryden PJ.

Physiother Can. 2008 Winter;60(1):30-9. doi: 10.3138/physio/60/1/30. Epub 2008 Apr 15.


Simple PCR assays improve the sensitivity of HIV-1 subtype B drug resistance testing and allow linking of resistance mutations.

Johnson JA, Li JF, Wei X, Lipscomb J, Bennett D, Brant A, Cong ME, Spira T, Shafer RW, Heneine W.

PLoS One. 2007 Jul 25;2(7):e638.


Baker's asthma.

Brant A.

Curr Opin Allergy Clin Immunol. 2007 Apr;7(2):152-5. Review.


Neural networks in chemosystematic studies of Asteraceae: a classification based on a dichotomic approach.

Ferreira MJ, Brant AJ, Alvarenga SA, Emerenciano VP.

Chem Biodivers. 2005 May;2(5):633-44.


Outcome of occupational asthma after cessation of exposure: a systematic review.

Rachiotis G, Savani R, Brant A, MacNeill SJ, Newman Taylor A, Cullinan P.

Thorax. 2007 Feb;62(2):147-52. Epub 2006 Oct 13. Review.


The prognosis of occupational asthma due to detergent enzymes: clinical, immunological and employment outcomes.

Brant A, Zekveld C, Welch J, Jones M, Taylor AN, Cullinan P.

Clin Exp Allergy. 2006 Apr;36(4):483-8.


Simple method for identification of skeletons of aporphine alkaloids from 13C NMR data using artificial neural networks.

Rufino AR, Brant AJ, Santos JB, Ferreira MJ, Emerenciano VP.

J Chem Inf Model. 2005 May-Jun;45(3):645-51.


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