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Items: 25

1.

RNA-Seq mapping and detection of gene fusions with a suffix array algorithm.

Sakarya O, Breu H, Radovich M, Chen Y, Wang YN, Barbacioru C, Utiramerur S, Whitley PP, Brockman JP, Vatta P, Zhang Z, Popescu L, Muller MW, Kudlingar V, Garg N, Li CY, Kong BS, Bodeau JP, Nutter RC, Gu J, Bramlett KS, Ichikawa JK, Hyland FC, Siddiqui AS.

PLoS Comput Biol. 2012;8(4):e1002464. doi: 10.1371/journal.pcbi.1002464. Epub 2012 Apr 5.

2.

Prediction of the tissue-specificity of selective estrogen receptor modulators by using a single biochemical method.

Dai SY, Chalmers MJ, Bruning J, Bramlett KS, Osborne HE, Montrose-Rafizadeh C, Barr RJ, Wang Y, Wang M, Burris TP, Dodge JA, Griffin PR.

Proc Natl Acad Sci U S A. 2008 May 20;105(20):7171-6. doi: 10.1073/pnas.0710802105. Epub 2008 May 12.

3.

Identification and characterization of noncalcemic, tissue-selective, nonsecosteroidal vitamin D receptor modulators.

Ma Y, Khalifa B, Yee YK, Lu J, Memezawa A, Savkur RS, Yamamoto Y, Chintalacharuvu SR, Yamaoka K, Stayrook KR, Bramlett KS, Zeng QQ, Chandrasekhar S, Yu XP, Linebarger JH, Iturria SJ, Burris TP, Kato S, Chin WW, Nagpal S.

J Clin Invest. 2006 Apr;116(4):892-904. Epub 2006 Mar 9.

4.

A 15-ketosterol is a liver X receptor ligand that suppresses sterol-responsive element binding protein-2 activity.

Schmidt RJ, Ficorilli JV, Zhang Y, Bramlett KS, Beyer TP, Borchert K, Dowless MS, Houck KA, Burris TP, Eacho PI, Liang G, Guo LW, Wilson WK, Michael LF, Cao G.

J Lipid Res. 2006 May;47(5):1037-44. Epub 2006 Jan 13.

5.

Potent inhibitors of LXXLL-based protein-protein interactions.

Galande AK, Bramlett KS, Trent JO, Burris TP, Wittliff JL, Spatola AF.

Chembiochem. 2005 Nov;6(11):1991-8.

PMID:
16222726
6.

Reconstitution of functional nuclear receptor proteins using high pressure refolding.

Schoner BE, Bramlett KS, Guo H, Burris TP.

Mol Genet Metab. 2005 Aug;85(4):318-22.

PMID:
15946878
7.

Coactivation of the human vitamin D receptor by the peroxisome proliferator-activated receptor gamma coactivator-1 alpha.

Savkur RS, Bramlett KS, Stayrook KR, Nagpal S, Burris TP.

Mol Pharmacol. 2005 Aug;68(2):511-7. Epub 2005 May 20.

8.

Regulation of pyruvate dehydrogenase kinase expression by the farnesoid X receptor.

Savkur RS, Bramlett KS, Michael LF, Burris TP.

Biochem Biophys Res Commun. 2005 Apr 1;329(1):391-6.

PMID:
15721319
9.

Regulation of carbohydrate metabolism by the farnesoid X receptor.

Stayrook KR, Bramlett KS, Savkur RS, Ficorilli J, Cook T, Christe ME, Michael LF, Burris TP.

Endocrinology. 2005 Mar;146(3):984-91. Epub 2004 Nov 24.

PMID:
15564327
10.

T0901317 is a dual LXR/FXR agonist.

Houck KA, Borchert KM, Hepler CD, Thomas JS, Bramlett KS, Michael LF, Burris TP.

Mol Genet Metab. 2004 Sep-Oct;83(1-2):184-7.

PMID:
15464433
11.

Ligand-dependent coactivation of the human bile acid receptor FXR by the peroxisome proliferator-activated receptor gamma coactivator-1alpha.

Savkur RS, Thomas JS, Bramlett KS, Gao Y, Michael LF, Burris TP.

J Pharmacol Exp Ther. 2005 Jan;312(1):170-8. Epub 2004 Aug 25.

12.

Pharmacology of nuclear receptor-coregulator recognition.

Savkur RS, Bramlett KS, Clawson D, Burris TP.

Vitam Horm. 2004;68:145-83. Review.

PMID:
15193454
13.

Thioether side chain cyclization for helical peptide formation: inhibitors of estrogen receptor-coactivator interactions.

Galande AK, Bramlett KS, Burris TP, Wittliff JL, Spatola AF.

J Pept Res. 2004 Mar;63(3):297-302.

PMID:
15049842
14.

Alternative splicing within the ligand binding domain of the human constitutive androstane receptor.

Savkur RS, Wu Y, Bramlett KS, Wang M, Yao S, Perkins D, Totten M, Searfoss G 3rd, Ryan TP, Su EW, Burris TP.

Mol Genet Metab. 2003 Sep-Oct;80(1-2):216-26.

PMID:
14567971
15.

Helix-stabilized cyclic peptides as selective inhibitors of steroid receptor-coactivator interactions.

Leduc AM, Trent JO, Wittliff JL, Bramlett KS, Briggs SL, Chirgadze NY, Wang Y, Burris TP, Spatola AF.

Proc Natl Acad Sci U S A. 2003 Sep 30;100(20):11273-8. Epub 2003 Sep 17.

16.

Target specificity of selective estrogen receptor modulators within human endometrial cancer cells.

Bramlett KS, Burris TP.

J Steroid Biochem Mol Biol. 2003 Jul;86(1):27-34.

PMID:
12943742
17.

A natural product ligand of the oxysterol receptor, liver X receptor.

Bramlett KS, Houck KA, Borchert KM, Dowless MS, Kulanthaivel P, Zhang Y, Beyer TP, Schmidt R, Thomas JS, Michael LF, Barr R, Montrose C, Eacho PI, Cao G, Burris TP.

J Pharmacol Exp Ther. 2003 Oct;307(1):291-6. Epub 2003 Jul 31.

18.

A chemical switch regulates fibrate specificity for peroxisome proliferator-activated receptor alpha (PPARalpha ) versus liver X receptor.

Thomas J, Bramlett KS, Montrose C, Foxworthy P, Eacho PI, McCann D, Cao G, Kiefer A, McCowan J, Yu KL, Grese T, Chin WW, Burris TP, Michael LF.

J Biol Chem. 2003 Jan 24;278(4):2403-10. Epub 2002 Nov 18.

19.

Liver X receptor and retinoic X receptor mediated ABCA1 regulation and cholesterol efflux in macrophage cells-messenger RNA measured by branched DNA technology.

Zhang Y, Beyer TP, Bramlett KS, Yao S, Burris TP, Schmidt RJ, Eacho PI, Cao G.

Mol Genet Metab. 2002 Sep-Oct;77(1-2):150-8.

PMID:
12359143
20.
21.

Ser-884 adjacent to the LXXLL motif of coactivator TRBP defines selectivity for ERs and TRs.

Ko L, Cardona GR, Iwasaki T, Bramlett KS, Burris TP, Chin WW.

Mol Endocrinol. 2002 Jan;16(1):128-40.

PMID:
11773444
22.

Repression of androgen-regulated gene expression by dominant negative androgen receptors.

Bramlett KS, Dits NF, Sui X, Jorge MC, Zhu X, Jenster G.

Mol Cell Endocrinol. 2001 Oct 25;183(1-2):19-28.

PMID:
11604220
23.

Ligands specify coactivator nuclear receptor (NR) box affinity for estrogen receptor subtypes.

Bramlett KS, Wu Y, Burris TP.

Mol Endocrinol. 2001 Jun;15(6):909-22.

PMID:
11376110
24.
25.

Specific androgen receptor activation by an artificial coactivator.

Sui X, Bramlett KS, Jorge MC, Swanson DA, von Eschenbach AC, Jenster G.

J Biol Chem. 1999 Apr 2;274(14):9449-54.

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