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An examination of the associations between pediatric loss of control eating, anxiety, and body composition in children and adolescents.

Grammer AC, Tanofsky-Kraff M, Burke NL, Byrne ME, Mi SJ, Jaramillo M, Shank LM, Kelly NR, Stojek MM, Schvey NA, Broadney MM, Brady SM, Yanovski SZ, Yanovski JA.

Eat Behav. 2018 Jun 27;30:109-114. doi: 10.1016/j.eatbeh.2018.06.007. [Epub ahead of print]


Integration of large-scale data for extraction of integrated Arabidopsis root cell-type specific models.

Scheunemann M, Brady SM, Nikoloski Z.

Sci Rep. 2018 May 21;8(1):7919. doi: 10.1038/s41598-018-26232-8.


Evaluating the contribution of differences in lean mass compartments for resting energy expenditure in African American and Caucasian American children.

Broadney MM, Shareef F, Marwitz SE, Brady SM, Yanovski SZ, DeLany JP, Yanovski JA.

Pediatr Obes. 2018 Jul;13(7):413-420. doi: 10.1111/ijpo.12282. Epub 2018 Apr 26.


A Gene Regulatory Network for Cellular Reprogramming in Plant Regeneration.

Ikeuchi M, Shibata M, Rymen B, Iwase A, Bågman AM, Watt L, Coleman D, Favero DS, Takahashi T, Ahnert SE, Brady SM, Sugimoto K.

Plant Cell Physiol. 2018 Apr 1;59(4):765-777. doi: 10.1093/pcp/pcy013.


Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.

Li B, Tang M, Nelson A, Caligagan H, Zhou X, Clark-Wiest C, Ngo R, Brady SM, Kliebenstein DJ.

Plant Cell. 2018 Jan;30(1):178-195. doi: 10.1105/tpc.17.00805. Epub 2018 Jan 9.


Profiling of Accessible Chromatin Regions across Multiple Plant Species and Cell Types Reveals Common Gene Regulatory Principles and New Control Modules.

Maher KA, Bajic M, Kajala K, Reynoso M, Pauluzzi G, West DA, Zumstein K, Woodhouse M, Bubb K, Dorrity MW, Queitsch C, Bailey-Serres J, Sinha N, Brady SM, Deal RB.

Plant Cell. 2018 Jan;30(1):15-36. doi: 10.1105/tpc.17.00581. Epub 2017 Dec 11.


SUPPRESSOR OF GAMMA RESPONSE1 Links DNA Damage Response to Organ Regeneration.

Johnson RA, Conklin PA, Tjahjadi M, Missirian V, Toal T, Brady SM, Britt AB.

Plant Physiol. 2018 Feb;176(2):1665-1675. doi: 10.1104/pp.17.01274. Epub 2017 Dec 8.


The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology.

Friesner J, Assmann SM, Bastow R, Bailey-Serres J, Beynon J, Brendel V, Buell CR, Bucksch A, Busch W, Demura T, Dinneny JR, Doherty CJ, Eveland AL, Falter-Braun P, Gehan MA, Gonzales M, Grotewold E, Gutierrez R, Kramer U, Krouk G, Ma S, Markelz RJC, Megraw M, Meyers BC, Murray JAH, Provart NJ, Rhee S, Smith R, Spalding EP, Taylor C, Teal TK, Torii KU, Town C, Vaughn M, Vierstra R, Ware D, Wilkins O, Williams C, Brady SM.

Plant Physiol. 2017 Dec;175(4):1499-1509. doi: 10.1104/pp.17.01490. No abstract available.


Nuclear Transcriptomes at High Resolution Using Retooled INTACT.

Reynoso MA, Pauluzzi GC, Kajala K, Cabanlit S, Velasco J, Bazin J, Deal R, Sinha NR, Brady SM, Bailey-Serres J.

Plant Physiol. 2018 Jan;176(1):270-281. doi: 10.1104/pp.17.00688. Epub 2017 Sep 27.


Segmentation of Vasculature from Fluorescently Labeled Endothelial Cells in Multi-Photon Microscopy Images.

Bates R, Irving B, Markelc B, Kaeppler J, Brown G, Muschel RJ, Brady SM, Grau V, Schnabel JA.

IEEE Trans Med Imaging. 2017 Aug 9. doi: 10.1109/TMI.2017.2725639. [Epub ahead of print]


HIV Risk, Substance Use, and Personality Characteristics among Adults with History of Serious Mental Illness.

Mainville CH, Richardson MA, Brady SM, Berger-Greenstein J, Bacic J.

Behav Med. 2017 Jul-Sep;43(3):165-175. doi: 10.1080/08964289.2017.1301874.


A randomized, comparative pilot trial of family-based interpersonal psychotherapy for reducing psychosocial symptoms, disordered-eating, and excess weight gain in at-risk preadolescents with loss-of-control-eating.

Shomaker LB, Tanofsky-Kraff M, Matherne CE, Mehari RD, Olsen CH, Marwitz SE, Bakalar JL, Ranzenhofer LM, Kelly NR, Schvey NA, Burke NL, Cassidy O, Brady SM, Dietz LJ, Wilfley DE, Yanovski SZ, Yanovski JA.

Int J Eat Disord. 2017 Sep;50(9):1084-1094. doi: 10.1002/eat.22741. Epub 2017 Jul 17.


Identification of Protein-DNA Interactions Using Enhanced Yeast One-Hybrid Assays and a Semiautomated Approach.

Gaudinier A, Tang M, Bågman AM, Brady SM.

Methods Mol Biol. 2017;1610:187-215. doi: 10.1007/978-1-4939-7003-2_13.


Examination of the interpersonal model of loss of control eating in the laboratory.

Shank LM, Crosby RD, Grammer AC, Shomaker LB, Vannucci A, Burke NL, Stojek M, Brady SM, Kozlosky M, Reynolds JC, Yanovski JA, Tanofsky-Kraff M.

Compr Psychiatry. 2017 Jul;76:36-44. doi: 10.1016/j.comppsych.2017.03.015. Epub 2017 Apr 3.


Prevention of insulin resistance in adolescents at risk for type 2 diabetes with depressive symptoms: 1-year follow-up of a randomized trial.

Shomaker LB, Kelly NR, Radin RM, Cassidy OL, Shank LM, Brady SM, Demidowich AP, Olsen CH, Chen KY, Stice E, Tanofsky-Kraff M, Yanovski JA.

Depress Anxiety. 2017 Oct;34(10):866-876. doi: 10.1002/da.22617. Epub 2017 Mar 31.


Evaluating Weight Status and Sex as Moderators of the Association of Serum Leptin with Bone Mineral Density in Children and Adolescents

Armaiz-Flores SA, Kelly NR, Galescu OA, Demidowich AP, Altschul AM, Brady SM, Hubbard VS, Pickworth CK, Tanofsky-Kraff M, Shomaker LB, Reynolds JC, Yanovski JA.

Horm Res Paediatr. 2017;87(4):233-243. doi: 10.1159/000459623. Epub 2017 Mar 30.


DNA methylation and gene expression regulation associated with vascularization in Sorghum bicolor.

Turco GM, Kajala K, Kunde-Ramamoorthy G, Ngan CY, Olson A, Deshphande S, Tolkunov D, Waring B, Stelpflug S, Klein P, Schmutz J, Kaeppler S, Ware D, Wei CL, Etchells JP, Brady SM.

New Phytol. 2017 May;214(3):1213-1229. doi: 10.1111/nph.14448. Epub 2017 Feb 10.


Successful Treatment of Suspected Pulmonary Arterial Hypertension in a Mealy Amazon Parrot (Amazona farinose).

Brady SM, Burgdorf-Moisuk A, Silverman S, Wack RF.

J Avian Med Surg. 2016 Dec;30(4):368-373. doi: 10.1647/2015-127.


Internalization of appearance ideals mediates the relationship between appearance-related pressures from peers and emotional eating among adolescent boys and girls.

Thompson KA, Kelly NR, Schvey NA, Brady SM, Courville AB, Tanofsky-Kraff M, Yanovski SZ, Yanovski JA, Shomaker LB.

Eat Behav. 2017 Jan;24:66-73. doi: 10.1016/j.eatbeh.2016.12.008. Epub 2016 Dec 22.


Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors.

Sparks EE, Drapek C, Gaudinier A, Li S, Ansariola M, Shen N, Hennacy JH, Zhang J, Turco G, Petricka JJ, Foret J, Hartemink AJ, Gordân R, Megraw M, Brady SM, Benfey PN.

Dev Cell. 2016 Dec 5;39(5):585-596. doi: 10.1016/j.devcel.2016.09.031. Epub 2016 Oct 27.


Excess weight gain prevention in adolescents: Three-year outcome following a randomized controlled trial.

Tanofsky-Kraff M, Shomaker LB, Wilfley DE, Young JF, Sbrocco T, Stephens M, Brady SM, Galescu O, Demidowich A, Olsen CH, Kozlosky M, Reynolds JC, Yanovski JA.

J Consult Clin Psychol. 2017 Mar;85(3):218-227. doi: 10.1037/ccp0000153. Epub 2016 Nov 3.


Associations of adolescent emotional and loss of control eating with 1-year changes in disordered eating, weight, and adiposity.

Stojek MMK, Tanofsky-Kraff M, Shomaker LB, Kelly NR, Thompson KA, Mehari RD, Marwitz SE, Demidowich AP, Galescu OA, Brady SM, Yanovski SZ, Yanovski JA.

Int J Eat Disord. 2017 May;50(5):551-560. doi: 10.1002/eat.22636. Epub 2016 Oct 18.


Pediatric Loss of Control Eating and High-Sensitivity C-Reactive Protein Concentrations.

Shank LM, Tanofsky-Kraff M, Kelly NR, Schvey NA, Marwitz SE, Mehari RD, Brady SM, Demidowich AP, Broadney MM, Galescu OA, Pickworth CK, Yanovski SZ, Yanovski JA.

Child Obes. 2017 Feb;13(1):1-8. doi: 10.1089/chi.2016.0199. Epub 2016 Oct 12.


A pilot study of the effects of niacin administration on free fatty acid and growth hormone concentrations in children with obesity.

Galescu OA, Crocker MK, Altschul AM, Marwitz SE, Brady SM, Yanovski JA.

Pediatr Obes. 2018 Jan;13(1):30-37. doi: 10.1111/ijpo.12184. Epub 2016 Sep 21.


Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation.

de Lucas M, Pu L, Turco G, Gaudinier A, Morao AK, Harashima H, Kim D, Ron M, Sugimoto K, Roudier F, Brady SM.

Plant Cell. 2016 Oct;28(10):2616-2631. Epub 2016 Sep 20.


The combination of dimethoxycurcumin with DNA methylation inhibitor enhances gene re-expression of promoter-methylated genes and antagonizes their cytotoxic effect.

Hassan HE, Keita JA, Narayan L, Brady SM, Frederick R, Carlson S, Glass KC, Natesan S, Buttolph T, Fandy TE.

Epigenetics. 2016 Sep 2:1-10. [Epub ahead of print]


Lateral root emergence in Arabidopsis is dependent on transcription factor LBD29 regulation of auxin influx carrier LAX3.

Porco S, Larrieu A, Du Y, Gaudinier A, Goh T, Swarup K, Swarup R, Kuempers B, Bishopp A, Lavenus J, Casimiro I, Hill K, Benkova E, Fukaki H, Brady SM, Scheres B, Péret B, Bennett MJ.

Development. 2016 Sep 15;143(18):3340-9. doi: 10.1242/dev.136283. Epub 2016 Aug 30.


A longitudinal study of serum insulin and insulin resistance as predictors of weight and body fat gain in African American and Caucasian children.

Sedaka NM, Olsen CH, Yannai LE, Stutzman WE, Krause AJ, Sherafat-Kazemzadeh R, Condarco TA, Brady SM, Demidowich AP, Reynolds JC, Yanovski SZ, Hubbard VS, Yanovski JA.

Int J Obes (Lond). 2017 Jan;41(1):61-70. doi: 10.1038/ijo.2016.145. Epub 2016 Aug 18.


RALFL34 regulates formative cell divisions in Arabidopsis pericycle during lateral root initiation.

Murphy E, Vu LD, Van den Broeck L, Lin Z, Ramakrishna P, van de Cotte B, Gaudinier A, Goh T, Slane D, Beeckman T, Inzé D, Brady SM, Fukaki H, De Smet I.

J Exp Bot. 2016 Aug;67(16):4863-75. doi: 10.1093/jxb/erw281. Epub 2016 Jul 18.


Plant developmental responses to climate change.

Gray SB, Brady SM.

Dev Biol. 2016 Nov 1;419(1):64-77. doi: 10.1016/j.ydbio.2016.07.023. Epub 2016 Aug 9. Review.


Emotion dysregulation and loss-of-control eating in children and adolescents.

Kelly NR, Tanofsky-Kraff M, Vannucci A, Ranzenhofer LM, Altschul AM, Schvey NA, Shank LM, Brady SM, Galescu O, Kozlosky M, Yanovski SZ, Yanovski JA.

Health Psychol. 2016 Oct;35(10):1110-9. doi: 10.1037/hea0000389. Epub 2016 Aug 8.


Indel Group in Genomes (IGG) Molecular Genetic Markers.

Toal TW, Burkart-Waco D, Howell T, Ron M, Kuppu S, Britt A, Chetelat R, Brady SM.

Plant Physiol. 2016 Sep;172(1):38-61. doi: 10.1104/pp.16.00354. Epub 2016 Jul 19.


Oncological image analysis.

Brady SM, Highnam R, Irving B, Schnabel JA.

Med Image Anal. 2016 Oct;33:7-12. doi: 10.1016/ Epub 2016 Jun 23.


A Randomized Controlled Trial to Prevent Depression and Ameliorate Insulin Resistance in Adolescent Girls at Risk for Type 2 Diabetes.

Shomaker LB, Kelly NR, Pickworth CK, Cassidy OL, Radin RM, Shank LM, Vannucci A, Thompson KA, Armaiz-Flores SA, Brady SM, Demidowich AP, Galescu OA, Courville AB, Olsen C, Chen KY, Stice E, Tanofsky-Kraff M, Yanovski JA.

Ann Behav Med. 2016 Oct;50(5):762-774.


Current and future direction in the management of scleroderma.

Brady SM, Shapiro L, Mousa SA.

Arch Dermatol Res. 2016 Sep;308(7):461-71. doi: 10.1007/s00403-016-1647-6. Epub 2016 Apr 30. Review.


Mapping Transcriptional Networks in Plants: Data-Driven Discovery of Novel Biological Mechanisms.

Gaudinier A, Brady SM.

Annu Rev Plant Biol. 2016 Apr 29;67:575-94. doi: 10.1146/annurev-arplant-043015-112205. Epub 2016 Jan 25. Review.


Pieces-of-parts for supervoxel segmentation with global context: Application to DCE-MRI tumour delineation.

Irving B, Franklin JM, Papież BW, Anderson EM, Sharma RA, Gleeson FV, Brady SM, Schnabel JA.

Med Image Anal. 2016 Aug;32:69-83. doi: 10.1016/ Epub 2016 Mar 21.


Molecular control of crop shade avoidance.

Carriedo LG, Maloof JN, Brady SM.

Curr Opin Plant Biol. 2016 Apr;30:151-8. doi: 10.1016/j.pbi.2016.03.005. Epub 2016 Mar 24. Review.


Associations between adiposity and indicators of thyroid status in children and adolescents.

Krause AJ, Cines B, Pogrebniak E, Sherafat-Kazemzadeh R, Demidowich AP, Galescu OA, Brady SM, Reynolds JC, Hubbard VS, Yanovski JA.

Pediatr Obes. 2016 Dec;11(6):551-558. doi: 10.1111/ijpo.12112. Epub 2016 Feb 22.


Effect of adapted interpersonal psychotherapy versus health education on mood and eating in the laboratory among adolescent girls with loss of control eating.

Tanofsky-Kraff M, Crosby RD, Vannucci A, Kozlosky M, Shomaker LB, Brady SM, Sbrocco T, Pickworth CK, Stephens M, Young JF, Olsen CH, Kelly NR, Radin R, Cassidy O, Wilfley DE, Reynolds JC, Yanovski JA.

Int J Eat Disord. 2016 May;49(5):490-8. doi: 10.1002/eat.22496. Epub 2016 Jan 21.


Pressure To Be Thin and Insulin Sensitivity Among Adolescents.

Schvey NA, Shomaker LB, Kelly NR, Pickworth CK, Cassidy O, Galescu O, Demidowich AP, Brady SM, Tanofsky-Kraff M, Yanovski JA.

J Adolesc Health. 2016 Jan;58(1):104-10. doi: 10.1016/j.jadohealth.2015.09.010.


Cortisol response to an induction of negative affect among adolescents with and without loss of control eating.

Radin RM, Shomaker LB, Kelly NR, Pickworth CK, Thompson KA, Brady SM, Demidowich A, Galescu O, Altschul AM, Shank LM, Yanovski SZ, Tanofsky-Kraff M, Yanovski JA.

Pediatr Obes. 2016 Dec;11(6):513-520. doi: 10.1111/ijpo.12095. Epub 2015 Dec 15.


Deformable image registration by combining uncertainty estimates from supervoxel belief propagation.

Heinrich MP, Simpson IJ, Papież BW, Brady SM, Schnabel JA.

Med Image Anal. 2016 Jan;27:57-71. doi: 10.1016/ Epub 2015 Oct 19.


50 years of Arabidopsis research: highlights and future directions.

Provart NJ, Alonso J, Assmann SM, Bergmann D, Brady SM, Brkljacic J, Browse J, Chapple C, Colot V, Cutler S, Dangl J, Ehrhardt D, Friesner JD, Frommer WB, Grotewold E, Meyerowitz E, Nemhauser J, Nordborg M, Pikaard C, Shanklin J, Somerville C, Stitt M, Torii KU, Waese J, Wagner D, McCourt P.

New Phytol. 2016 Feb;209(3):921-44. doi: 10.1111/nph.13687. Epub 2015 Oct 14. Review.


A brief history of the TDIF-PXY signalling module: balancing meristem identity and differentiation during vascular development.

Etchells JP, Smit ME, Gaudinier A, Williams CJ, Brady SM.

New Phytol. 2016 Jan;209(2):474-84. doi: 10.1111/nph.13642. Epub 2015 Sep 28. Review.


Clustering and Differential Alignment Algorithm: Identification of Early Stage Regulators in the Arabidopsis thaliana Iron Deficiency Response.

Koryachko A, Matthiadis A, Muhammad D, Foret J, Brady SM, Ducoste JJ, Tuck J, Long TA, Williams C.

PLoS One. 2015 Aug 28;10(8):e0136591. doi: 10.1371/journal.pone.0136591. eCollection 2015.


Effects of Interrupting Children's Sedentary Behaviors With Activity on Metabolic Function: A Randomized Trial.

Belcher BR, Berrigan D, Papachristopoulou A, Brady SM, Bernstein SB, Brychta RJ, Hattenbach JD, Tigner IL Jr, Courville AB, Drinkard BE, Smith KP, Rosing DR, Wolters PL, Chen KY, Yanovski JA.

J Clin Endocrinol Metab. 2015 Oct;100(10):3735-43. doi: 10.1210/jc.2015-2803. Epub 2015 Aug 27.


Reassess the t Test: Interact with All Your Data via ANOVA.

Brady SM, Burow M, Busch W, Carlborg Ö, Denby KJ, Glazebrook J, Hamilton ES, Harmer SL, Haswell ES, Maloof JN, Springer NM, Kliebenstein DJ.

Plant Cell. 2015 Aug;27(8):2088-94. doi: 10.1105/tpc.15.00238. Epub 2015 Jul 28.


Metabolic characteristics of youth with loss of control eating.

Radin RM, Tanofsky-Kraff M, Shomaker LB, Kelly NR, Pickworth CK, Shank LM, Altschul AM, Brady SM, Demidowich AP, Yanovski SZ, Hubbard VS, Yanovski JA.

Eat Behav. 2015 Dec;19:86-9. doi: 10.1016/j.eatbeh.2015.07.002. Epub 2015 Jul 18.


A tomato phloem-mobile protein regulates the shoot-to-root ratio by mediating the auxin response in distant organs.

Spiegelman Z, Ham BK, Zhang Z, Toal TW, Brady SM, Zheng Y, Fei Z, Lucas WJ, Wolf S.

Plant J. 2015 Sep;83(5):853-63. doi: 10.1111/tpj.12932. Epub 2015 Aug 1.

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