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Items: 21

1.

High-density single-nucleotide polymorphism maps of the human genome.

Miller RD, Phillips MS, Jo I, Donaldson MA, Studebaker JF, Addleman N, Alfisi SV, Ankener WM, Bhatti HA, Callahan CE, Carey BJ, Conley CL, Cyr JM, Derohannessian V, Donaldson RA, Elosua C, Ford SE, Forman AM, Gelfand CA, Grecco NM, Gutendorf SM, Hock CR, Hozza MJ, Hur S, In SM, Jackson DL, Jo SA, Jung SC, Kim S, Kimm K, Kloss EF, Koboldt DC, Kuebler JM, Kuo FS, Lathrop JA, Lee JK, Leis KL, Livingston SA, Lovins EG, Lundy ML, Maggan S, Minton M, Mockler MA, Morris DW, Nachtman EP, Oh B, Park C, Park CW, Pavelka N, Perkins AB, Restine SL, Sachidanandam R, Reinhart AJ, Scott KE, Shah GJ, Tate JM, Varde SA, Walters A, White JR, Yoo YK, Lee JE, Boyce-Jacino MT, Kwok PY; SNP Consortium Allele Frequency Project.

Genomics. 2005 Aug;86(2):117-26.

2.

Primer design and marker clustering for multiplex SNP-IT primer extension genotyping assay using statistical modeling.

Yuryev A, Huang J, Scott KE, Kuebler J, Donaldson M, Phillips MS, Pohl M, Boyce-Jacino MT.

Bioinformatics. 2004 Dec 12;20(18):3526-32. Epub 2004 Jul 29.

PMID:
15284101
3.

Auto-validation of fluorescent primer extension genotyping assay using signal clustering and neural networks.

Huang CY, Studebaker J, Yuryev A, Huang J, Scott KE, Kuebler J, Varde S, Alfisi S, Gelfand CA, Pohl M, Boyce-Jacino MT.

BMC Bioinformatics. 2004 Apr 2;5:36.

4.

Large-scale genotyping of complex DNA.

Kennedy GC, Matsuzaki H, Dong S, Liu WM, Huang J, Liu G, Su X, Cao M, Chen W, Zhang J, Liu W, Yang G, Di X, Ryder T, He Z, Surti U, Phillips MS, Boyce-Jacino MT, Fodor SP, Jones KW.

Nat Biotechnol. 2003 Oct;21(10):1233-7. Epub 2003 Sep 7.

PMID:
12960966
5.

Chromosome-wide distribution of haplotype blocks and the role of recombination hot spots.

Phillips MS, Lawrence R, Sachidanandam R, Morris AP, Balding DJ, Donaldson MA, Studebaker JF, Ankener WM, Alfisi SV, Kuo FS, Camisa AL, Pazorov V, Scott KE, Carey BJ, Faith J, Katari G, Bhatti HA, Cyr JM, Derohannessian V, Elosua C, Forman AM, Grecco NM, Hock CR, Kuebler JM, Lathrop JA, Mockler MA, Nachtman EP, Restine SL, Varde SA, Hozza MJ, Gelfand CA, Broxholme J, Abecasis GR, Boyce-Jacino MT, Cardon LR.

Nat Genet. 2003 Mar;33(3):382-7. Epub 2003 Feb 18.

PMID:
12590262
6.

Predicting the success of primer extension genotyping assays using statistical modeling.

Yuryev A, Huang J, Pohl M, Patch R, Watson F, Bell P, Donaldson M, Phillips MS, Boyce-Jacino MT.

Nucleic Acids Res. 2002 Dec 1;30(23):e131.

7.

SNPstream UHT: ultra-high throughput SNP genotyping for pharmacogenomics and drug discovery.

Bell PA, Chaturvedi S, Gelfand CA, Huang CY, Kochersperger M, Kopla R, Modica F, Pohl M, Varde S, Zhao R, Zhao X, Boyce-Jacino MT, Yassen A.

Biotechniques. 2002 Jun;Suppl:70-2, 74, 76-7. Erratum in: Biotechniques. 2003 Mar;34(3):496.

PMID:
12083401
8.

A SNPshot: pharmacogenetics and the future of drug therapy.

Pfost DR, Boyce-Jacino MT, Grant DM.

Trends Biotechnol. 2000 Aug;18(8):334-8. Review.

PMID:
10899814
9.

Solid-phase sequence scanning for drug resistance detection in tuberculosis.

Head SR, Parikh K, Rogers YH, Bishai W, Goelet P, Boyce-Jacino MT.

Mol Cell Probes. 1999 Apr;13(2):81-7.

PMID:
10208797
10.

Immobilization of oligonucleotides onto a glass support via disulfide bonds: A method for preparation of DNA microarrays.

Rogers YH, Jiang-Baucom P, Huang ZJ, Bogdanov V, Anderson S, Boyce-Jacino MT.

Anal Biochem. 1999 Jan 1;266(1):23-30.

PMID:
9887210
11.

Nested genetic bit analysis (N-GBA) for mutation detection in the p53 tumor suppressor gene.

Head SR, Rogers YH, Parikh K, Lan G, Anderson S, Goelet P, Boyce-Jacino MT.

Nucleic Acids Res. 1997 Dec 15;25(24):5065-71.

12.

Frequent HLA class I and DP sequence mismatches in serologically (HLA-A, HLA-B, HLA-DR) and molecularly (HLA-DRB1, HLA-DQA1, HLA-DQB1) HLA-identical unrelated bone marrow transplant pairs.

Santamaria P, Reinsmoen NL, Lindstrom AL, Boyce-Jacino MT, Barbosa JJ, Faras AJ, McGlave PB, Rich SS.

Blood. 1994 Jun 15;83(12):3834. No abstract available.

PMID:
8204903
13.

Frequent HLA class I and DP sequence mismatches in serologically (HLA-A, HLA-B, HLA-DR) and molecularly (HLA-DRB1, HLA-DQA1, HLA-DQB1) HLA-identical unrelated bone marrow transplant pairs.

Santamaria P, Reinsmoen NL, Lindstrom AL, Boyce-Jacino MT, Barbosa JJ, Faras AJ, McGlave PB, Rich SS.

Blood. 1994 Jan 1;83(1):280-7. Erratum in: Blood. 1994 Jun 15;83(12):3834.

PMID:
8274743
14.

HLA class I sequence-based typing.

Santamaria P, Lindstrom AL, Boyce-Jacino MT, Myster SH, Barbosa JJ, Faras AJ, Rich SS.

Hum Immunol. 1993 May;37(1):39-50. Erratum in: Hum Immunol 1994 Dec;41(4):292.

PMID:
8376187
15.

Multiple complex families of endogenous retroviruses are highly conserved in the genus Gallus.

Boyce-Jacino MT, O'Donoghue K, Faras AJ.

J Virol. 1992 Aug;66(8):4919-29.

16.

Novel human endogenous sequences related to human immunodeficiency virus type 1.

Horwitz MS, Boyce-Jacino MT, Faras AJ.

J Virol. 1992 Apr;66(4):2170-9.

17.

HLA class II "typing": direct sequencing of DRB, DQB, and DQA genes.

Santamaria P, Boyce-Jacino MT, Lindstrom AL, Barbosa JJ, Faras AJ, Rich SS.

Hum Immunol. 1992 Feb;33(2):69-81.

PMID:
1563984
18.

Alloreactive T cells can distinguish between the same human class II MHC products on different B cell lines.

Santamaria P, Boyce-Jacino MT, Lindstrom AL, Rich SS, Faras AJ, Barbosa JJ.

J Immunol. 1991 Mar 15;146(6):1822-8.

PMID:
1706381
19.

Detection of novel sequence heterogeneity and haplotypic diversity of HLA class II genes.

Santamaria P, Boyce-Jacino MT, Lindstrom AL, Barbosa JJ, Faras AJ, Rich SS.

Immunogenetics. 1991;33(5-6):374-87.

PMID:
1904837
20.

Phylogenetic distribution of the novel avian endogenous provirus family EAV-0.

Resnick RM, Boyce-Jacino MT, Fu Q, Faras AJ.

J Virol. 1990 Oct;64(10):4640-53.

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