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Eagle: multi-locus association mapping on a genome-wide scale made routine.

George AW, Verbyla A, Bowden J.

Bioinformatics. 2019 Oct 9. pii: btz759. doi: 10.1093/bioinformatics/btz759. [Epub ahead of print]


The Evolution of Spiritual Care in the NCCN Distress Management Guidelines.

Handzo G, Bowden JM, King S.

J Natl Compr Canc Netw. 2019 Oct 1;17(10):1257-1261. doi: 10.6004/jnccn.2019.7352. Review.


Patient perceptions of their decision to undergo palliative chemotherapy in the Edinburgh Cancer Centre.

Bowden J, Gwyther B, Price A, Swan A, Nussey F, Hacking B, Shearer M, Lloyd A.

J R Coll Physicians Edinb. 2019 Sep;49(3):199-203. doi: 10.4997/JRCPE.2019.306.


Re: Use of WhatsApp in an oral and maxillofacial surgery department at a major trauma centre and its role during major incidents: our experience.

Cabral M, Brown D, Collard B, Bowden J.

Br J Oral Maxillofac Surg. 2019 Aug 30. pii: S0266-4356(19)30338-9. doi: 10.1016/j.bjoms.2019.08.019. [Epub ahead of print] No abstract available.


Genome-wide association analysis of self-reported daytime sleepiness identifies 42 loci that suggest biological subtypes.

Wang H, Lane JM, Jones SE, Dashti HS, Ollila HM, Wood AR, van Hees VT, Brumpton B, Winsvold BS, Kantojärvi K, Palviainen T, Cade BE, Sofer T, Song Y, Patel K, Anderson SG, Bechtold DA, Bowden J, Emsley R, Kyle SD, Little MA, Loudon AS, Scheer FAJL, Purcell SM, Richmond RC, Spiegelhalder K, Tyrrell J, Zhu X, Hublin C, Kaprio JA, Kristiansson K, Sulkava S, Paunio T, Hveem K, Nielsen JB, Willer CJ, Zwart JA, Strand LB, Frayling TM, Ray D, Lawlor DA, Rutter MK, Weedon MN, Redline S, Saxena R.

Nat Commun. 2019 Aug 13;10(1):3503. doi: 10.1038/s41467-019-11456-7.


Differential disruption of conditioned ejaculatory preference in the male rat based on different sensory modalities by micro-infusions of naloxone to the medial preoptic area or ventral tegmental area.

Quintana GR, Birrel M, Marceau S, Kalantari N, Bowden J, Bachoura Y, Borduas E, Lemay V, Payne JW, Cionnaith CM, Pfaus JG.

Psychopharmacology (Berl). 2019 Jul 29. doi: 10.1007/s00213-019-05334-9. [Epub ahead of print]


Mental Health Training in Pediatric Residency: Where Can We Go?

Harris E, Bowden J, Greiner E, Duby JC.

J Pediatr. 2019 Aug;211:4-6. doi: 10.1016/j.jpeds.2019.05.075. No abstract available.


Mendelian randomisation analysis of the effect of educational attainment and cognitive ability on smoking behaviour.

Sanderson E, Davey Smith G, Bowden J, Munafò MR.

Nat Commun. 2019 Jul 3;10(1):2949. doi: 10.1038/s41467-019-10679-y.


Does the Partners in Health scale allow meaningful comparisons of chronic condition self-management between men and women? Testing measurement invariance.

Smith D, Fairweather-Schmidt AK, Harvey P, Bowden J, Lawn S, Battersby M.

J Adv Nurs. 2019 Jun 25. doi: 10.1111/jan.14124. [Epub ahead of print]


Priorities for the effective implementation of osteoarthritis management programs: an OARSI international consensus exercise.

Eyles JP, Hunter DJ, Bennell KL, Dziedzic KS, Hinman RS, van der Esch M, Holden MA, Bowden JL; Joint Effort Initiative Members.

Osteoarthritis Cartilage. 2019 Sep;27(9):1270-1279. doi: 10.1016/j.joca.2019.05.015. Epub 2019 Jun 1.


Examining toxic trace element exposure in American alligators.

Nilsen FM, Bowden JA, Rainwater TR, Brunell AM, Kassim BL, Wilkinson PM, Guillette LJ Jr, Long SE, Schock TB.

Environ Int. 2019 Jul;128:324-334. doi: 10.1016/j.envint.2019.04.035. Epub 2019 May 8.


Mendelian randomization evaluation of causal effects of fibrinogen on incident coronary heart disease.

Ward-Caviness CK, de Vries PS, Wiggins KL, Huffman JE, Yanek LR, Bielak LF, Giulianini F, Guo X, Kleber ME, Kacprowski T, Groß S, Petersman A, Davey Smith G, Hartwig FP, Bowden J, Hemani G, Müller-Nuraysid M, Strauch K, Koenig W, Waldenberger M, Meitinger T, Pankratz N, Boerwinkle E, Tang W, Fu YP, Johnson AD, Song C, de Maat MPM, Uitterlinden AG, Franco OH, Brody JA, McKnight B, Chen YI, Psaty BM, Mathias RA, Becker DM, Peyser PA, Smith JA, Bielinski SJ, Ridker PM, Taylor KD, Yao J, Tracy R, Delgado G, Trompet S, Sattar N, Jukema JW, Becker LC, Kardia SLR, Rotter JI, März W, Dörr M, Chasman DI, Dehghan A, O'Donnell CJ, Smith NL, Peters A, Morrison AC.

PLoS One. 2019 May 10;14(5):e0216222. doi: 10.1371/journal.pone.0216222. eCollection 2019.


Daily heat treatment maintains mitochondrial function and attenuates atrophy in human skeletal muscle subjected to immobilization.

Hafen PS, Abbott K, Bowden J, Lopiano R, Hancock CR, Hyldahl RD.

J Appl Physiol (1985). 2019 Jul 1;127(1):47-57. doi: 10.1152/japplphysiol.01098.2018. Epub 2019 May 2.


Software tool for internal standard based normalization of lipids, and effect of data-processing strategies on resulting values.

Koelmel JP, Cochran JA, Ulmer CZ, Levy AJ, Patterson RE, Olsen BC, Yost RA, Bowden JA, Garrett TJ.

BMC Bioinformatics. 2019 Apr 29;20(1):217. doi: 10.1186/s12859-019-2803-8.


Circumpolar terrestrial arthropod monitoring: A review of ongoing activities, opportunities and challenges, with a focus on spiders.

Gillespie MAK, Alfredsson M, Barrio IC, Bowden J, Convey P, Coulson SJ, Culler LE, Dahl MT, Daly KM, Koponen S, Loboda S, Marusik Y, Sandström JP, Sikes DS, Slowik J, Høye TT.

Ambio. 2019 Apr 27. doi: 10.1007/s13280-019-01185-y. [Epub ahead of print] Review.


A Qualitative Exploratory Study of Informal Carers' Experiences of Identifying and Managing Oral Pain and Discomfort in Community-Dwelling Older People Living with Dementia.

Newton P, Curl C, Prasad R, Pass P, Bowden J.

Geriatrics (Basel). 2018 Jun 21;3(3). pii: E32. doi: 10.3390/geriatrics3030032.


Status and trends of terrestrial arthropod abundance and diversity in the North Atlantic region of the Arctic.

Gillespie MAK, Alfredsson M, Barrio IC, Bowden JJ, Convey P, Culler LE, Coulson SJ, Krogh PH, Koltz AM, Koponen S, Loboda S, Marusik Y, Sandström JP, Sikes DS, Høye TT.

Ambio. 2019 Mar 16. doi: 10.1007/s13280-019-01162-5. [Epub ahead of print]


Meta-analysis and Mendelian randomization: A review.

Bowden J, Holmes MV.

Res Synth Methods. 2019 Mar 12. doi: 10.1002/jrsm.1346. [Epub ahead of print] Review.


A Response to Geriatric Oncology, Spirituality, and Palliative Care by Dr. Lodovicio Balducci.

Handzo G, Bowden J.

J Pain Symptom Manage. 2019 Oct;58(4):e1-e2. doi: 10.1016/j.jpainsymman.2019.02.027. Epub 2019 Mar 7. No abstract available.


Genome-wide association study identifies genetic loci for self-reported habitual sleep duration supported by accelerometer-derived estimates.

Dashti HS, Jones SE, Wood AR, Lane JM, van Hees VT, Wang H, Rhodes JA, Song Y, Patel K, Anderson SG, Beaumont RN, Bechtold DA, Bowden J, Cade BE, Garaulet M, Kyle SD, Little MA, Loudon AS, Luik AI, Scheer FAJL, Spiegelhalder K, Tyrrell J, Gottlieb DJ, Tiemeier H, Ray DW, Purcell SM, Frayling TM, Redline S, Lawlor DA, Rutter MK, Weedon MN, Saxena R.

Nat Commun. 2019 Mar 7;10(1):1100. doi: 10.1038/s41467-019-08917-4.


Lipidomics for wildlife disease etiology and biomarker discovery: a case study of pansteatitis outbreak in South Africa.

Koelmel JP, Ulmer CZ, Fogelson S, Jones CM, Botha H, Bangma JT, Guillette TC, Luus-Powell WJ, Sara JR, Smit WJ, Albert K, Miller HA, Guillette MP, Olsen BC, Cochran JA, Garrett TJ, Yost RA, Bowden JA.

Metabolomics. 2019 Mar 5;15(3):38. doi: 10.1007/s11306-019-1490-9.


NIST lipidomics workflow questionnaire: an assessment of community-wide methodologies and perspectives.

Bowden JA, Ulmer CZ, Jones CM, Koelmel JP, Yost RA.

Metabolomics. 2018 Mar 20;14(5):53. doi: 10.1007/s11306-018-1340-1.


Sugar-sweetened beverage (SSB) consumption, correlates and interventions among Australian Aboriginal and Torres Strait Islander communities: a scoping review.

Wright KM, Dono J, Brownbill AL, Pearson Nee Gibson O, Bowden J, Wycherley TP, Keech W, O'Dea K, Roder D, Avery JC, Miller CL.

BMJ Open. 2019 Feb 27;9(2):e023630. doi: 10.1136/bmjopen-2018-023630.


Biological and clinical insights from genetics of insomnia symptoms.

Lane JM, Jones SE, Dashti HS, Wood AR, Aragam KG, van Hees VT, Strand LB, Winsvold BS, Wang H, Bowden J, Song Y, Patel K, Anderson SG, Beaumont RN, Bechtold DA, Cade BE, Haas M, Kathiresan S, Little MA, Luik AI, Loudon AS, Purcell S, Richmond RC, Scheer FAJL, Schormair B, Tyrrell J, Winkelman JW, Winkelmann J; HUNT All In Sleep, Hveem K, Zhao C, Nielsen JB, Willer CJ, Redline S, Spiegelhalder K, Kyle SD, Ray DW, Zwart JA, Brumpton B, Frayling TM, Lawlor DA, Rutter MK, Weedon MN, Saxena R.

Nat Genet. 2019 Mar;51(3):387-393. doi: 10.1038/s41588-019-0361-7. Epub 2019 Feb 25.


Per- and polyfluoroalkyl substances (PFAS) in plasma of the West Indian manatee (Trichechus manatus).

Palmer K, Bangma JT, Reiner JL, Bonde RK, Korte JE, Boggs ASP, Bowden JA.

Mar Pollut Bull. 2019 Mar;140:610-615. doi: 10.1016/j.marpolbul.2019.02.010. Epub 2019 Feb 16.


Evaluation of an intervention to train health professionals working with Aboriginal and Torres Strait Islander people to provide smoking cessation advice.

Martin K, Dono J, Stewart HB, Sparrow A, Miller C, Roder D, Bowden J.

Aust N Z J Public Health. 2019 Apr;43(2):156-162. doi: 10.1111/1753-6405.12879. Epub 2019 Feb 20.


Increased adiposity, inflammation, metabolic disruption and dyslipidemia in adult male offspring of DOSS treated C57BL/6 dams.

Temkin AM, Bowers RR, Ulmer CZ, Penta K, Bowden JA, Nyland J, Baatz JE, Spyropoulos DD.

Sci Rep. 2019 Feb 6;9(1):1530. doi: 10.1038/s41598-018-38383-9.


Conditioned partner preference in male and female rats for a somatosensory cue.

Quintana GR, Desbiens S, Marceau S, Kalantari N, Bowden J, Pfaus JG.

Behav Neurosci. 2019 Apr;133(2):188-197. doi: 10.1037/bne0000300. Epub 2019 Feb 4.


Genome-wide association analyses of chronotype in 697,828 individuals provides insights into circadian rhythms.

Jones SE, Lane JM, Wood AR, van Hees VT, Tyrrell J, Beaumont RN, Jeffries AR, Dashti HS, Hillsdon M, Ruth KS, Tuke MA, Yaghootkar H, Sharp SA, Jie Y, Thompson WD, Harrison JW, Dawes A, Byrne EM, Tiemeier H, Allebrandt KV, Bowden J, Ray DW, Freathy RM, Murray A, Mazzotti DR, Gehrman PR, Lawlor DA, Frayling TM, Rutter MK, Hinds DA, Saxena R, Weedon MN.

Nat Commun. 2019 Jan 29;10(1):343. doi: 10.1038/s41467-018-08259-7.


Bullying and sexual abuse and their association with harmful behaviours, antidepressant use and health-related quality of life in adulthood: a population-based study in South Australia.

González-Chica DA, Licinio J, Musker M, Wong M, Bowden J, Hay P, Chittleborough C, Stocks N.

BMC Public Health. 2019 Jan 7;19(1):26. doi: 10.1186/s12889-018-6367-8.


Best supportive care in advanced lung cancer-more than a label?

Bowden J, Fenning S, Marron B, Macpherson C, Boyce S, Wardrope V, Campbell K, Johnston L.

BMJ. 2018 Dec 27;363:k5017. doi: 10.1136/bmj.k5017. No abstract available.


Correction to: Effectiveness of a new model of primary care management on knee pain and function in patients with knee osteoarthritis: Protocol for THE PARTNER STUDY.

Hunter DJ, Hinman RS, Bowden JL, Egerton T, Briggs AM, Bunker SJ, Kasza J, Forbes AB, French SD, Pirotta M, Schofield DJ, Zwar NA, Bennell KL; PARTNER Study Team.

BMC Musculoskelet Disord. 2018 Dec 20;19(1):443. doi: 10.1186/s12891-018-2362-6.


The role of Peripheral Vision in the Flashed Face Distortion Effect.

Bowden J, Whitaker D, Dunn MJ.

Perception. 2019 Jan;48(1):93-101. doi: 10.1177/0301006618817419. Epub 2018 Dec 19.


Parental drinking in Australia: Does the age of children in the home matter?

Bowden JA, Delfabbro P, Room R, Miller C, Wilson C.

Drug Alcohol Rev. 2019 Mar;38(3):306-315. doi: 10.1111/dar.12875. Epub 2018 Nov 22.


Improving the accuracy of two-sample summary-data Mendelian randomization: moving beyond the NOME assumption.

Bowden J, Del Greco M F, Minelli C, Zhao Q, Lawlor DA, Sheehan NA, Thompson J, Davey Smith G.

Int J Epidemiol. 2019 Jun 1;48(3):728-742. doi: 10.1093/ije/dyy258.


An examination of multivariable Mendelian randomization in the single-sample and two-sample summary data settings.

Sanderson E, Davey Smith G, Windmeijer F, Bowden J.

Int J Epidemiol. 2019 Jun 1;48(3):713-727. doi: 10.1093/ije/dyy262.


Detecting and correcting for bias in Mendelian randomization analyses using Gene-by-Environment interactions.

Spiller W, Slichter D, Bowden J, Davey Smith G.

Int J Epidemiol. 2019 Jun 1;48(3):702-712. doi: 10.1093/ije/dyy204.


Improving the visualization, interpretation and analysis of two-sample summary data Mendelian randomization via the Radial plot and Radial regression.

Bowden J, Spiller W, Del Greco M F, Sheehan N, Thompson J, Minelli C, Davey Smith G.

Int J Epidemiol. 2018 Dec 1;47(6):2100. doi: 10.1093/ije/dyy265. No abstract available.


Perfluoroalkyl substances in diamondback terrapins (Malaclemys terrapin) in coastal South Carolina.

Bangma JT, Ragland JM, Rainwater TR, Bowden JA, Gibbons JW, Reiner JL.

Chemosphere. 2019 Jan;215:305-312. doi: 10.1016/j.chemosphere.2018.10.023. Epub 2018 Oct 5.


Optimization of Folch, Bligh-Dyer, and Matyash sample-to-extraction solvent ratios for human plasma-based lipidomics studies.

Ulmer CZ, Jones CM, Yost RA, Garrett TJ, Bowden JA.

Anal Chim Acta. 2018 Dec 11;1037:351-357. doi: 10.1016/j.aca.2018.08.004. Epub 2018 Aug 8.


Optimization of Electrospray Ionization Source Parameters for Lipidomics To Reduce Misannotation of In-Source Fragments as Precursor Ions.

Gathungu RM, Larrea P, Sniatynski MJ, Marur VR, Bowden JA, Koelmel JP, Starke-Reed P, Hubbard VS, Kristal BS.

Anal Chem. 2018 Nov 20;90(22):13523-13532. doi: 10.1021/acs.analchem.8b03436. Epub 2018 Nov 2.


Comparison of butterfly volumetric modulated arc therapy to full arc with or without deep inspiration breath hold for the treatment of mediastinal lymphoma.

Starke A, Bowden J, Lynn R, Hall K, Hudson K, Rato A, Aldridge E, Robb D, Steele P, Brady J, Mikhaeel NG.

Radiother Oncol. 2018 Dec;129(3):449-455. doi: 10.1016/j.radonc.2018.08.017. Epub 2018 Sep 21.


Treatable traits can be identified in a severe asthma registry and predict future exacerbations.

McDonald VM, Hiles SA, Godbout K, Harvey ES, Marks GB, Hew M, Peters M, Bardin PG, Reynolds PN, Upham JW, Baraket M, Bhikoo Z, Bowden J, Brockway B, Chung LP, Cochrane B, Foxley G, Garrett J, Jayaram L, Jenkins C, Katelaris C, Katsoulotos G, Koh MS, Kritikos V, Lambert M, Langton D, Lara Rivero A, Middleton PG, Nanguzgambo A, Radhakrishna N, Reddel H, Rimmer J, Southcott AM, Sutherland M, Thien F, Wark PAB, Yang IA, Yap E, Gibson PG.

Respirology. 2019 Jan;24(1):37-47. doi: 10.1111/resp.13389. Epub 2018 Sep 19.


Invited Commentary: Detecting Individual and Global Horizontal Pleiotropy in Mendelian Randomization-A Job for the Humble Heterogeneity Statistic?

Bowden J, Hemani G, Davey Smith G.

Am J Epidemiol. 2018 Dec 1;187(12):2681-2685. doi: 10.1093/aje/kwy185.


Age at puberty and risk of asthma: A Mendelian randomisation study.

Minelli C, van der Plaat DA, Leynaert B, Granell R, Amaral AFS, Pereira M, Mahmoud O, Potts J, Sheehan NA, Bowden J, Thompson J, Jarvis D, Davey Smith G, Henderson J.

PLoS Med. 2018 Aug 7;15(8):e1002634. doi: 10.1371/journal.pmed.1002634. eCollection 2018 Aug.


A comparison of heterogeneity variance estimators in simulated random-effects meta-analyses.

Langan D, Higgins JPT, Jackson D, Bowden J, Veroniki AA, Kontopantelis E, Viechtbauer W, Simmonds M.

Res Synth Methods. 2019 Mar;10(1):83-98. doi: 10.1002/jrsm.1316. Epub 2018 Sep 6.


Adiposity-Mortality Relationships in Type 2 Diabetes, Coronary Heart Disease, and Cancer Subgroups in the UK Biobank, and Their Modification by Smoking.

Jenkins DA, Bowden J, Robinson HA, Sattar N, Loos RJF, Rutter MK, Sperrin M.

Diabetes Care. 2018 Sep;41(9):1878-1886. doi: 10.2337/dc17-2508. Epub 2018 Jul 3.


Improving the visualization, interpretation and analysis of two-sample summary data Mendelian randomization via the Radial plot and Radial regression.

Bowden J, Spiller W, Del Greco M F, Sheehan N, Thompson J, Minelli C, Davey Smith G.

Int J Epidemiol. 2018 Aug 1;47(4):1264-1278. doi: 10.1093/ije/dyy101. Erratum in: Int J Epidemiol. 2018 Dec 1;47(6):2100.


Investigating causality in associations between education and smoking: a two-sample Mendelian randomization study.

Gage SH, Bowden J, Davey Smith G, Munafò MR.

Int J Epidemiol. 2018 Aug 1;47(4):1131-1140. doi: 10.1093/ije/dyy131.


The use of single armed observational data to closing the gap in otherwise disconnected evidence networks: a network meta-analysis in multiple myeloma.

Schmitz S, Maguire Á, Morris J, Ruggeri K, Haller E, Kuhn I, Leahy J, Homer N, Khan A, Bowden J, Buchanan V, O'Dwyer M, Cook G, Walsh C.

BMC Med Res Methodol. 2018 Jun 28;18(1):66. doi: 10.1186/s12874-018-0509-7.

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