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RegressionExplorer: Interactive Exploration of Logistic Regression Models with Subgroup Analysis.

Dingen D, Veer MV, Houthuizen P, Mestrom EHJ, Korsten EHHM, Bouwman ARA, Wijk JV.

IEEE Trans Vis Comput Graph. 2018 Sep 13. doi: 10.1109/TVCG.2018.2865043. [Epub ahead of print]


Assessing Metagenomic Signals Recovered from Lyuba, a 42,000-Year-Old Permafrost-Preserved Woolly Mammoth Calf.

Ferrari G, Lischer HEL, Neukamm J, Rayo E, Borel N, Pospischil A, Rühli F, Bouwman AS, Campana MG.

Genes (Basel). 2018 Aug 31;9(9). pii: E436. doi: 10.3390/genes9090436.


Proteomic evidence of dietary sources in ancient dental calculus.

Hendy J, Warinner C, Bouwman A, Collins MJ, Fiddyment S, Fischer R, Hagan R, Hofman CA, Holst M, Chaves E, Klaus L, Larson G, Mackie M, McGrath K, Mundorff AZ, Radini A, Rao H, Trachsel C, Velsko IM, Speller CF.

Proc Biol Sci. 2018 Jul 18;285(1883). pii: 20180977. doi: 10.1098/rspb.2018.0977.


Comparison of ultrasound guidance with palpation and direct visualisation for peripheral vein cannulation in adult patients: a systematic review and meta-analysis.

van Loon FHJ, Buise MP, Claassen JJF, Dierick-van Daele ATM, Bouwman ARA.

Br J Anaesth. 2018 Aug;121(2):358-366. doi: 10.1016/j.bja.2018.04.047. Epub 2018 Jul 2. Review.


Exploring spatiotemporal changes of the Yangtze River (Changjiang) nitrogen and phosphorus sources, retention and export to the East China Sea and Yellow Sea.

Liu X, Beusen AHW, Van Beek LPH, Mogollón JM, Ran X, Bouwman AF.

Water Res. 2018 Oct 1;142:246-255. doi: 10.1016/j.watres.2018.06.006. Epub 2018 Jun 4.


Safety of moderate-to-deep sedation performed by sedation practitioners: A national prospective observational study.

Koers L, Eberl S, Cappon A, Bouwman A, Schlack W, Hermanides J, Preckel B.

Eur J Anaesthesiol. 2018 Sep;35(9):659-666. doi: 10.1097/EJA.0000000000000835.


Utility of whole-genome sequence data for across-breed genomic prediction.

Raymond B, Bouwman AC, Schrooten C, Houwing-Duistermaat J, Veerkamp RF.

Genet Sel Evol. 2018 May 18;50(1):27. doi: 10.1186/s12711-018-0396-8.


Pain upon inserting a peripheral intravenous catheter: Size does not matter.

van Loon FH, Puijn LA, van Aarle WH, Dierick-van Daele AT, Bouwman AR.

J Vasc Access. 2018 May;19(3):258-265. doi: 10.1177/1129729817747531. Epub 2018 Mar 4.


Fasciola hepatica eggs in paleofaeces of the Persian onager Equus hemionus onager, a donkey from Chehrabad archaeological site, dating back to the Sassanid Empire (224-651 AD), in ancient Iran.

Askari Z, Mas-Coma S, Bouwman AS, Boenke N, Stöllner T, Aali A, Rezaiian M, Mowlavi G.

Infect Genet Evol. 2018 Apr 24;62:233-243. doi: 10.1016/j.meegid.2018.04.028. [Epub ahead of print]


Improving accuracy of bulls' predicted genomic breeding values for fertility using daughters' milk progesterone profiles.

Tenghe AMM, Bouwman AC, Berglund B, de Koning DJ, Veerkamp RF.

J Dairy Sci. 2018 Jun;101(6):5177-5193. doi: 10.3168/jds.2016-12304. Epub 2018 Mar 7.


Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals.

Bouwman AC, Daetwyler HD, Chamberlain AJ, Ponce CH, Sargolzaei M, Schenkel FS, Sahana G, Govignon-Gion A, Boitard S, Dolezal M, Pausch H, Brøndum RF, Bowman PJ, Thomsen B, Guldbrandtsen B, Lund MS, Servin B, Garrick DJ, Reecy J, Vilkki J, Bagnato A, Wang M, Hoff JL, Schnabel RD, Taylor JF, Vinkhuyzen AAE, Panitz F, Bendixen C, Holm LE, Gredler B, Hozé C, Boussaha M, Sanchez MP, Rocha D, Capitan A, Tribout T, Barbat A, Croiseau P, Drögemüller C, Jagannathan V, Vander Jagt C, Crowley JJ, Bieber A, Purfield DC, Berry DP, Emmerling R, Götz KU, Frischknecht M, Russ I, Sölkner J, Van Tassell CP, Fries R, Stothard P, Veerkamp RF, Boichard D, Goddard ME, Hayes BJ.

Nat Genet. 2018 Mar;50(3):362-367. doi: 10.1038/s41588-018-0056-5. Epub 2018 Feb 19.


[Risk of heart failure diminished thanks to stomach reduction in obesity].

Botter B, Koolen E, van Montfort G, Bracke F, Bouwman A, Buise M.

Ned Tijdschr Geneeskd. 2018;162:D1972. Dutch.


Analyzing and modelling the effect of long-term fertilizer management on crop yield and soil organic carbon in China.

Zhang J, Balkovič J, Azevedo LB, Skalský R, Bouwman AF, Xu G, Wang J, Xu M, Yu C.

Sci Total Environ. 2018 Jun 15;627:361-372. doi: 10.1016/j.scitotenv.2018.01.090. Epub 2018 Feb 3.


Estimated allele substitution effects underlying genomic evaluation models depend on the scaling of allele counts.

Bouwman AC, Hayes BJ, Calus MPL.

Genet Sel Evol. 2017 Oct 30;49(1):79. doi: 10.1186/s12711-017-0355-9.


2,000 Year old β-thalassemia case in Sardinia suggests malaria was endemic by the Roman period.

Viganó C, Haas C, Rühli FJ, Bouwman A.

Am J Phys Anthropol. 2017 Oct;164(2):362-370. doi: 10.1002/ajpa.23278. Epub 2017 Jul 6.


Short-Term Changes in Cardiovascular Hemodynamics in Response to Bariatric Surgery and Weight Loss Using the Nexfin® Non-invasive Continuous Monitoring Device: a Pilot Study.

Pouwels S, Lascaris B, Nienhuijs SW, Bouwman AR, Buise MP.

Obes Surg. 2017 Jul;27(7):1835-1841. doi: 10.1007/s11695-017-2564-2.


Lessons from temporal and spatial patterns in global use of N and P fertilizer on cropland.

Bouwman AF, Beusen AH, Lassaletta L, van Apeldoorn DF, van Grinsven HJ, Zhang J, Ittersum van MK.

Sci Rep. 2017 Jan 13;7:40366. doi: 10.1038/srep40366.


Queen Nefertari, the Royal Spouse of Pharaoh Ramses II: A Multidisciplinary Investigation of the Mummified Remains Found in Her Tomb (QV66).

Habicht ME, Bianucci R, Buckley SA, Fletcher J, Bouwman AS, Öhrström LM, Seiler R, Galassi FM, Hajdas I, Vassilika E, Böni T, Henneberg M, Rühli FJ.

PLoS One. 2016 Nov 30;11(11):e0166571. doi: 10.1371/journal.pone.0166571. eCollection 2016.


Efficient genomic prediction based on whole-genome sequence data using split-and-merge Bayesian variable selection.

Calus MP, Bouwman AC, Schrooten C, Veerkamp RF.

Genet Sel Evol. 2016 Jun 29;48(1):49. doi: 10.1186/s12711-016-0225-x.


Archaeogenetics in evolutionary medicine.

Bouwman A, Rühli F.

J Mol Med (Berl). 2016 Sep;94(9):971-7. doi: 10.1007/s00109-016-1438-8. Epub 2016 Jun 11. Review.


Genome-wide association study for endocrine fertility traits using single nucleotide polymorphism arrays and sequence variants in dairy cattle.

Tenghe AMM, Bouwman AC, Berglund B, Strandberg E, de Koning DJ, Veerkamp RF.

J Dairy Sci. 2016 Jul;99(7):5470-5485. doi: 10.3168/jds.2015-10533. Epub 2016 May 4.


Development of the A-DIVA Scale: A Clinical Predictive Scale to Identify Difficult Intravenous Access in Adult Patients Based on Clinical Observations.

van Loon FH, Puijn LA, Houterman S, Bouwman AR.

Medicine (Baltimore). 2016 Apr;95(16):e3428. doi: 10.1097/MD.0000000000003428.


Negative global phosphorus budgets challenge sustainable intensification of grasslands.

Sattari SZ, Bouwman AF, Martinez Rodríguez R, Beusen AH, van Ittersum MK.

Nat Commun. 2016 Feb 16;7:10696. doi: 10.1038/ncomms10696.


Identifications of ancient Egyptian royal mummies from the 18th Dynasty reconsidered.

Habicht ME, Bouwman AS, Rühli FJ.

Am J Phys Anthropol. 2016 Jan;159(Suppl 61):S216-31. doi: 10.1002/ajpa.22909. Review.


Estimating genetic parameters for fertility in dairy cows from in-line milk progesterone profiles.

Tenghe AM, Bouwman AC, Berglund B, Strandberg E, Blom JY, Veerkamp RF.

J Dairy Sci. 2015 Aug;98(8):5763-73. doi: 10.3168/jds.2014-8732. Epub 2015 May 23.


Global implementation of two shared socioeconomic pathways for future sanitation and wastewater flows.

van Puijenbroek PJ, Bouwman AF, Beusen AH, Lucas PL.

Water Sci Technol. 2015;71(2):227-33. doi: 10.2166/wst.2014.498.


Direct evidence of milk consumption from ancient human dental calculus.

Warinner C, Hendy J, Speller C, Cappellini E, Fischer R, Trachsel C, Arneborg J, Lynnerup N, Craig OE, Swallow DM, Fotakis A, Christensen RJ, Olsen JV, Liebert A, Montalva N, Fiddyment S, Charlton S, Mackie M, Canci A, Bouwman A, Rühli F, Gilbert MT, Collins MJ.

Sci Rep. 2014 Nov 27;4:7104. doi: 10.1038/srep07104.


Post mortem DNA degradation of human tissue experimentally mummified in salt.

Shved N, Haas C, Papageorgopoulou C, Akguel G, Paulsen K, Bouwman A, Warinner C, Rühli F.

PLoS One. 2014 Oct 22;9(10):e110753. doi: 10.1371/journal.pone.0110753. eCollection 2014.


Consequences of splitting whole-genome sequencing effort over multiple breeds on imputation accuracy.

Bouwman AC, Veerkamp RF.

BMC Genet. 2014 Oct 3;15:105. doi: 10.1186/s12863-014-0105-8.


Evaluation of measures of correctness of genotype imputation in the context of genomic prediction: a review of livestock applications.

Calus MP, Bouwman AC, Hickey JM, Veerkamp RF, Mulder HA.

Animal. 2014 Nov;8(11):1743-53. doi: 10.1017/S1751731114001803. Epub 2014 Jul 21. Review.


Impact of postoperative renal replacement therapy on long-term outcome after cardiac surgery increases with age.

Haanschoten MC, van Straten AH, Bouwman A, Bindels AJ, van Zundert AA, Soliman Hamad MA.

J Card Surg. 2014 Jul;29(4):464-9. doi: 10.1111/jocs.12335. Epub 2014 Apr 18.


Irreversible electroporation for nonthermal tumor ablation in the clinical setting: a systematic review of safety and efficacy.

Scheffer HJ, Nielsen K, de Jong MC, van Tilborg AA, Vieveen JM, Bouwman AR, Meijer S, van Kuijk C, van den Tol PM, Meijerink MR.

J Vasc Interv Radiol. 2014 Jul;25(7):997-1011; quiz 1011. doi: 10.1016/j.jvir.2014.01.028. Epub 2014 Mar 18. Review.


Imputation of non-genotyped individuals based on genotyped relatives: assessing the imputation accuracy of a real case scenario in dairy cattle.

Bouwman AC, Hickey JM, Calus MP, Veerkamp RF.

Genet Sel Evol. 2014 Feb 3;46:6. doi: 10.1186/1297-9686-46-6.


Ancient DNA analysis reveals high frequency of European lactase persistence allele (T-13910) in medieval central europe.

Krüttli A, Bouwman A, Akgül G, Della Casa P, Rühli F, Warinner C.

PLoS One. 2014 Jan 23;9(1):e86251. doi: 10.1371/journal.pone.0086251. eCollection 2014.


Exploring causal networks of bovine milk fatty acids in a multivariate mixed model context.

Bouwman AC, Valente BD, Janss LL, Bovenhuis H, Rosa GJ.

Genet Sel Evol. 2014 Jan 17;46:2. doi: 10.1186/1297-9686-46-2.


Fine mapping of a quantitative trait locus for bovine milk fat composition on Bos taurus autosome 19.

Bouwman AC, Visker MH, van Arendonk JM, Bovenhuis H.

J Dairy Sci. 2014 Feb;97(2):1139-49. doi: 10.3168/jds.2013-7197. Epub 2013 Dec 6.


The global nitrogen cycle in the twenty-first century.

Fowler D, Coyle M, Skiba U, Sutton MA, Cape JN, Reis S, Sheppard LJ, Jenkins A, Grizzetti B, Galloway JN, Vitousek P, Leach A, Bouwman AF, Butterbach-Bahl K, Dentener F, Stevenson D, Amann M, Voss M.

Philos Trans R Soc Lond B Biol Sci. 2013 May 27;368(1621):20130164. doi: 10.1098/rstb.2013.0164. Print 2013 Jul 5. Review.


Global trends and uncertainties in terrestrial denitrification and N₂O emissions.

Bouwman AF, Beusen AH, Griffioen J, Van Groenigen JW, Hefting MM, Oenema O, Van Puijenbroek PJ, Seitzinger S, Slomp CP, Stehfest E.

Philos Trans R Soc Lond B Biol Sci. 2013 May 27;368(1621):20130112. doi: 10.1098/rstb.2013.0112. Print 2013 Jul 5.


Genetic variation in vitamin B-12 content of bovine milk and its association with SNP along the bovine genome.

Rutten MJ, Bouwman AC, Sprong RC, van Arendonk JA, Visker MH.

PLoS One. 2013 Apr 23;8(4):e62382. doi: 10.1371/journal.pone.0062382. Print 2013.


Advances in ancient DNA research can help radiological interpretations of archaeological diseases.

Bouwman A, Rühli F.

Skeletal Radiol. 2013 Jun;42(6):751-2. doi: 10.1007/s00256-012-1568-1. Epub 2013 Jan 12. No abstract available.


Exploring global Cryptosporidium emissions to surface water.

Hofstra N, Bouwman AF, Beusen AH, Medema GJ.

Sci Total Environ. 2013 Jan 1;442:10-9. doi: 10.1016/j.scitotenv.2012.10.013. Epub 2012 Nov 21.


Genetic correlation between composition of bovine milk fat in winter and summer, and DGAT1 and SCD1 by season interactions.

Duchemin S, Bovenhuis H, Stoop WM, Bouwman AC, van Arendonk JA, Visker MH.

J Dairy Sci. 2013 Jan;96(1):592-604. doi: 10.3168/jds.2012-5454. Epub 2012 Nov 3.


Genomic regions associated with bovine milk fatty acids in both summer and winter milk samples.

Bouwman AC, Visker MH, van Arendonk JA, Bovenhuis H.

BMC Genet. 2012 Oct 29;13:93. doi: 10.1186/1471-2156-13-93.


Genotype of a historic strain of Mycobacterium tuberculosis.

Bouwman AS, Kennedy SL, Müller R, Stephens RH, Holst M, Caffell AC, Roberts CA, Brown TA.

Proc Natl Acad Sci U S A. 2012 Nov 6;109(45):18511-6. doi: 10.1073/pnas.1209444109. Epub 2012 Oct 22.


Residual soil phosphorus as the missing piece in the global phosphorus crisis puzzle.

Sattari SZ, Bouwman AF, Giller KE, van Ittersum MK.

Proc Natl Acad Sci U S A. 2012 Apr 17;109(16):6348-53. doi: 10.1073/pnas.1113675109. Epub 2012 Mar 19.


European-scale modelling of groundwater denitrification and associated N₂O production.

Keuskamp JA, van Drecht G, Bouwman AF.

Environ Pollut. 2012 Jun;165:67-76. doi: 10.1016/j.envpol.2012.02.008. Epub 2012 Mar 8.


A Bayesian approach to detect QTL affecting a simulated binary and quantitative trait.

Bouwman AC, Janss LL, Heuven HC.

BMC Proc. 2011 May 27;5 Suppl 3:S4. doi: 10.1186/1753-6561-5-S3-S4.


Comparison of land nitrogen budgets for European agriculture by various modeling approaches.

de Vries W, Leip A, Reinds GJ, Kros J, Lesschen JP, Bouwman AF.

Environ Pollut. 2011 Nov;159(11):3254-68. doi: 10.1016/j.envpol.2011.03.038. Epub 2011 May 12.


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