Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 37

1.

Shifting meiotic to mitotic spindle assembly in oocytes disrupts chromosome alignment.

Bennabi I, Quéguiner I, Kolano A, Boudier T, Mailly P, Verlhac MH, Terret ME.

EMBO Rep. 2018 Feb;19(2):368-381. doi: 10.15252/embr.201745225. Epub 2018 Jan 12.

2.

NucleiNet: A convolutional encoder-decoder network for bio-image denoising.

Zichuan Liu, Yifei Hu, Hang Xu, Nasser L, Coquet P, Boudier T, Hao Yu.

Conf Proc IEEE Eng Med Biol Soc. 2017 Jul;2017:1986-1989. doi: 10.1109/EMBC.2017.8037240.

PMID:
29060284
3.

Rapid Synaptogenesis in the Nucleus Accumbens Is Induced by a Single Cocaine Administration and Stabilized by Mitogen-Activated Protein Kinase Interacting Kinase-1 Activity.

Dos Santos M, Salery M, Forget B, Garcia Perez MA, Betuing S, Boudier T, Vanhoutte P, Caboche J, Heck N.

Biol Psychiatry. 2017 Dec 1;82(11):806-818. doi: 10.1016/j.biopsych.2017.03.014. Epub 2017 Mar 29.

4.

A novel toolbox to investigate tissue spatial organization applied to the study of the islets of Langerhans.

Tran Thi Nhu H, Arrojo E Drigo R, Berggren PO, Boudier T.

Sci Rep. 2017 Mar 17;7:44261. doi: 10.1038/srep44261.

5.

DiAna, an ImageJ tool for object-based 3D co-localization and distance analysis.

Gilles JF, Dos Santos M, Boudier T, Bolte S, Heck N.

Methods. 2017 Feb 15;115:55-64. doi: 10.1016/j.ymeth.2016.11.016. Epub 2016 Nov 24.

PMID:
27890650
6.

A-type Lamins Form Distinct Filamentous Networks with Differential Nuclear Pore Complex Associations.

Xie W, Chojnowski A, Boudier T, Lim JS, Ahmed S, Ser Z, Stewart C, Burke B.

Curr Biol. 2016 Oct 10;26(19):2651-2658. doi: 10.1016/j.cub.2016.07.049. Epub 2016 Sep 15.

7.

Functional Assessment of Genetic Variants with Outcomes Adapted to Clinical Decision-Making.

Thouvenot P, Ben Yamin B, Fourrière L, Lescure A, Boudier T, Del Nery E, Chauchereau A, Goldgar DE, Houdayer C, Stoppa-Lyonnet D, Nicolas A, Millot GA.

PLoS Genet. 2016 Jun 6;12(6):e1006096. doi: 10.1371/journal.pgen.1006096. eCollection 2016 Jun.

8.

Optimal processing for gel electrophoresis images: Applying Monte Carlo Tree Search in GelApp.

Nguyen PV, Ghezal A, Hsueh YC, Boudier T, Gan SK, Lee HK.

Electrophoresis. 2016 Aug;37(15-16):2208-16. doi: 10.1002/elps.201600197. Epub 2016 Jul 4.

PMID:
27251892
9.

OpenSegSPIM: a user-friendly segmentation tool for SPIM data.

Gole L, Ong KH, Boudier T, Yu W, Ahmed S.

Bioinformatics. 2016 Jul 1;32(13):2075-7. doi: 10.1093/bioinformatics/btw093. Epub 2016 Feb 22.

PMID:
27153681
10.

Progerin reduces LAP2α-telomere association in Hutchinson-Gilford progeria.

Chojnowski A, Ong PF, Wong ES, Lim JS, Mutalif RA, Navasankari R, Dutta B, Yang H, Liow YY, Sze SK, Boudier T, Wright GD, Colman A, Burke B, Stewart CL, Dreesen O.

Elife. 2015 Aug 27;4. doi: 10.7554/eLife.07759.

11.

Proliferation-dependent positioning of individual centromeres in the interphase nucleus of human lymphoblastoid cell lines.

Ollion J, Loll F, Cochennec J, Boudier T, Escudé C.

Mol Biol Cell. 2015 Jul 1;26(13):2550-60. doi: 10.1091/mbc.E14-05-1002. Epub 2015 May 6.

12.

Analysis of nuclear organization with TANGO, software for high-throughput quantitative analysis of 3D fluorescence microscopy images.

Ollion J, Cochennec J, Loll F, Escudé C, Boudier T.

Methods Mol Biol. 2015;1228:203-22. doi: 10.1007/978-1-4939-1680-1_16.

PMID:
25311132
13.

A new automated 3D detection of synaptic contacts reveals the formation of cortico-striatal synapses upon cocaine treatment in vivo.

Heck N, Dos Santos M, Amairi B, Salery M, Besnard A, Herzog E, Boudier T, Vanhoutte P, Caboche J.

Brain Struct Funct. 2015 Sep;220(5):2953-66. doi: 10.1007/s00429-014-0837-2. Epub 2014 Jul 8.

PMID:
25001083
14.

The architecture of Rhodobacter sphaeroides chromatophores.

Scheuring S, Nevo R, Liu LN, Mangenot S, Charuvi D, Boudier T, Prima V, Hubert P, Sturgis JN, Reich Z.

Biochim Biophys Acta. 2014 Aug;1837(8):1263-70. doi: 10.1016/j.bbabio.2014.03.011. Epub 2014 Mar 28.

15.

A generic classification-based method for segmentation of nuclei in 3D images of early embryos.

Gul-Mohammed J, Arganda-Carreras I, Andrey P, Galy V, Boudier T.

BMC Bioinformatics. 2014 Jan 14;15:9. doi: 10.1186/1471-2105-15-9.

16.

TANGO: a generic tool for high-throughput 3D image analysis for studying nuclear organization.

Ollion J, Cochennec J, Loll F, Escudé C, Boudier T.

Bioinformatics. 2013 Jul 15;29(14):1840-1. doi: 10.1093/bioinformatics/btt276. Epub 2013 May 16.

17.

Tangentially migrating neurons assemble a primary cilium that promotes their reorientation to the cortical plate.

Baudoin JP, Viou L, Launay PS, Luccardini C, Espeso Gil S, Kiyasova V, Irinopoulou T, Alvarez C, Rio JP, Boudier T, Lechaire JP, Kessaris N, Spassky N, Métin C.

Neuron. 2012 Dec 20;76(6):1108-22. doi: 10.1016/j.neuron.2012.10.027.

18.

Multiple binding of repressed mRNAs by the P-body protein Rck/p54.

Ernoult-Lange M, Baconnais S, Harper M, Minshall N, Souquere S, Boudier T, Bénard M, Andrey P, Pierron G, Kress M, Standart N, le Cam E, Weil D.

RNA. 2012 Sep;18(9):1702-15. doi: 10.1261/rna.034314.112. Epub 2012 Jul 26.

19.

High-speed atomic force microscopy: cooperative adhesion and dynamic equilibrium of junctional microdomain membrane proteins.

Colom A, Casuso I, Boudier T, Scheuring S.

J Mol Biol. 2012 Oct 19;423(2):249-56. doi: 10.1016/j.jmb.2012.07.004. Epub 2012 Jul 14.

PMID:
22796628
20.

Software for drift compensation, particle tracking and particle analysis of high-speed atomic force microscopy image series.

Husain M, Boudier T, Paul-Gilloteaux P, Casuso I, Scheuring S.

J Mol Recognit. 2012 May;25(5):292-8. doi: 10.1002/jmr.2187.

PMID:
22528191
21.

Direct image-based correlative microscopy technique for coupling identification and structural investigation of bacterial symbionts associated with metazoans.

Halary S, Duperron S, Boudier T.

Appl Environ Microbiol. 2011 Jun;77(12):4172-9. doi: 10.1128/AEM.02461-10. Epub 2011 Apr 22.

22.

NEMO: a tool for analyzing gene and chromosome territory distributions from 3D-FISH experiments.

Iannuccelli E, Mompart F, Gellin J, Lahbib-Mansais Y, Yerle M, Boudier T.

Bioinformatics. 2010 Mar 1;26(5):696-7. doi: 10.1093/bioinformatics/btq013. Epub 2010 Jan 14.

PMID:
20080510
23.

Structural information, resolution, and noise in high-resolution atomic force microscopy topographs.

Fechner P, Boudier T, Mangenot S, Jaroslawski S, Sturgis JN, Scheuring S.

Biophys J. 2009 May 6;96(9):3822-31. doi: 10.1016/j.bpj.2009.02.011.

24.

Electron tomography of early melanosomes: implications for melanogenesis and the generation of fibrillar amyloid sheets.

Hurbain I, Geerts WJ, Boudier T, Marco S, Verkleij AJ, Marks MS, Raposo G.

Proc Natl Acad Sci U S A. 2008 Dec 16;105(50):19726-31. doi: 10.1073/pnas.0803488105. Epub 2008 Nov 25.

25.

3D FISH for the quantification of methane- and sulphur-oxidizing endosymbionts in bacteriocytes of the hydrothermal vent mussel Bathymodiolus azoricus.

Halary S, Riou V, Gaill F, Boudier T, Duperron S.

ISME J. 2008 Mar;2(3):284-92. doi: 10.1038/ismej.2008.3. Epub 2008 Jan 24.

PMID:
18219282
26.

TomoJ: tomography software for three-dimensional reconstruction in transmission electron microscopy.

Messaoudii C, Boudier T, Sanchez Sorzano CO, Marco S.

BMC Bioinformatics. 2007 Aug 6;8:288.

27.

Three-dimensional architecture of presynaptic terminal cytomatrix.

Siksou L, Rostaing P, Lechaire JP, Boudier T, Ohtsuka T, Fejtová A, Kao HT, Greengard P, Gundelfinger ED, Triller A, Marty S.

J Neurosci. 2007 Jun 27;27(26):6868-77.

28.

From high-resolution AFM topographs to atomic models of supramolecular assemblies.

Scheuring S, Boudier T, Sturgis JN.

J Struct Biol. 2007 Aug;159(2):268-76. Epub 2007 Feb 17.

PMID:
17399998
29.

Analysis of synaptic ultrastructure without fixative using high-pressure freezing and tomography.

Rostaing P, Real E, Siksou L, Lechaire JP, Boudier T, Boeckers TM, Gertler F, Gundelfinger ED, Triller A, Marty S.

Eur J Neurosci. 2006 Dec;24(12):3463-74.

PMID:
17229095
30.

Multiple-axis tomography: applications to basal bodies from Paramecium tetraurelia.

Messaoudi C, de Loubresse NG, Boudier T, Dupuis-Williams P, Marco S.

Biol Cell. 2006 Jul;98(7):415-25.

PMID:
16499478
32.

Smart 3D-FISH: automation of distance analysis in nuclei of interphase cells by image processing.

Gué M, Messaoudi C, Sun JS, Boudier T.

Cytometry A. 2005 Sep;67(1):18-26.

33.

A public software for energy filtering transmission electron tomography (EFTET-J): application to the study of granular inclusions in bacteria from Riftia pachyptila.

Boudier T, Lechaire JP, Frébourg G, Messaoudi C, Mory C, Colliex C, Gaill F, Marco S.

J Struct Biol. 2005 Aug;151(2):151-9.

PMID:
15979897
34.

Electron tomography of biological samples.

Marco S, Boudier T, Messaoudi C, Rigaud JL.

Biochemistry (Mosc). 2004 Nov;69(11):1219-25. Review.

35.

Use of cryo-negative staining in tomographic reconstruction of biological objects: application to T4 bacteriophage.

Messaoudi C, Boudier T, Lechaire JP, Rigaud JL, Delacroix H, Gaill F, Marco S.

Biol Cell. 2003 Sep;95(6):393-8.

PMID:
14519556
36.
37.

Organising multi-dimensional biological image information: the BioImage Database.

Carazo JM, Stelzer EH, Engel A, Fita I, Henn C, Machtynger J, McNeil P, Shotton DM, Chagoyen M, de Alarcón PA, Fritsch R, Heymann JB, Kalko S, Pittet JJ, Rodriguez-Tomé P, Boudier T.

Nucleic Acids Res. 1999 Jan 1;27(1):280-3.

Supplemental Content

Loading ...
Support Center