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Items: 20

1.

Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations.

Roy Chowdhury T, Lee JY, Bottos EM, Brislawn CJ, White RA 3rd, Bramer LM, Brown J, Zucker JD, Kim YM, Jumpponen A, Rice CW, Fansler SJ, Metz TO, McCue LA, Callister SJ, Song HS, Jansson JK.

mSystems. 2019 Jun 11;4(4). pii: e00061-19. doi: 10.1128/mSystems.00061-19.

2.

Rapid Microbial Dynamics in Response to an Induced Wetting Event in Antarctic Dry Valley Soils.

Niederberger TD, Bottos EM, Sohm JA, Gunderson T, Parker A, Coyne KJ, Capone DG, Carpenter EJ, Cary SC.

Front Microbiol. 2019 Apr 4;10:621. doi: 10.3389/fmicb.2019.00621. eCollection 2019.

3.

Nematodes in a polar desert reveal the relative role of biotic interactions in the coexistence of soil animals.

Caruso T, Hogg ID, Nielsen UN, Bottos EM, Lee CK, Hopkins DW, Cary SC, Barrett JE, Green TGA, Storey BC, Wall DH, Adams BJ.

Commun Biol. 2019 Feb 15;2:63. doi: 10.1038/s42003-018-0260-y. eCollection 2019.

4.

Biotic interactions are an unexpected yet critical control on the complexity of an abiotically driven polar ecosystem.

Lee CK, Laughlin DC, Bottos EM, Caruso T, Joy K, Barrett JE, Brabyn L, Nielsen UN, Adams BJ, Wall DH, Hopkins DW, Pointing SB, McDonald IR, Cowan DA, Banks JC, Stichbury GA, Jones I, Zawar-Reza P, Katurji M, Hogg ID, Sparrow AD, Storey BC, Allan Green TG, Cary SC.

Commun Biol. 2019 Feb 15;2:62. doi: 10.1038/s42003-018-0274-5. eCollection 2019.

5.

Degradation and defluorination of 6:2 fluorotelomer sulfonamidoalkyl betaine and 6:2 fluorotelomer sulfonate by Gordonia sp. strain NB4-1Y under sulfur-limiting conditions.

Shaw DMJ, Munoz G, Bottos EM, Duy SV, Sauvé S, Liu J, Van Hamme JD.

Sci Total Environ. 2019 Jan 10;647:690-698. doi: 10.1016/j.scitotenv.2018.08.012. Epub 2018 Aug 3.

PMID:
30092525
6.

A unified conceptual framework for prediction and control of microbiomes.

Stegen JC, Bottos EM, Jansson JK.

Curr Opin Microbiol. 2018 Aug;44:20-27. doi: 10.1016/j.mib.2018.06.002. Epub 2018 Jul 11. Review.

PMID:
30007202
7.

Dispersal limitation and thermodynamic constraints govern spatial structure of permafrost microbial communities.

Bottos EM, Kennedy DW, Romero EB, Fansler SJ, Brown JM, Bramer LM, Chu RK, Tfaily MM, Jansson JK, Stegen JC.

FEMS Microbiol Ecol. 2018 Aug 1;94(8). doi: 10.1093/femsec/fiy110.

PMID:
29912311
8.

Moleculo Long-Read Sequencing Facilitates Assembly and Genomic Binning from Complex Soil Metagenomes.

White RA 3rd, Bottos EM, Roy Chowdhury T, Zucker JD, Brislawn CJ, Nicora CD, Fansler SJ, Glaesemann KR, Glass K, Jansson JK.

mSystems. 2016 Jun 28;1(3). pii: e00045-16. eCollection 2016 May-Jun.

9.

Draft Genome Sequence of Mesorhizobium sp. UFLA 01-765, a Multitolerant, Efficient Symbiont and Plant Growth-Promoting Strain Isolated from Zn-Mining Soil Using Leucaena leucocephala as a Trap Plant.

Rangel WM, Thijs S, Moreira FM, Weyens N, Vangronsveld J, Van Hamme JD, Bottos EM, Rineau F.

Genome Announc. 2016 Mar 10;4(2). pii: e00050-16. doi: 10.1128/genomeA.00050-16.

10.

Draft Genome Sequence of Pantoea ananatis GB1, a Plant-Growth-Promoting Hydrocarbonoclastic Root Endophyte, Isolated at a Diesel Fuel Phytoremediation Site Planted with Populus.

Gkorezis P, Van Hamme JD, Bottos EM, Thijs S, Balseiro-Romero M, Monterroso C, Kidd PS, Rineau F, Weyens N, Vangronsveld J.

Genome Announc. 2016 Feb 25;4(1). pii: e00028-16. doi: 10.1128/genomeA.00028-16.

11.

Draft Genome Sequence of Arthrobacter sp. Strain SPG23, a Hydrocarbon-Degrading and Plant Growth-Promoting Soil Bacterium.

Gkorezis P, Bottos EM, Van Hamme JD, Thijs S, Rineau F, Franzetti A, Balseiro-Romero M, Weyens N, Vangronsveld J.

Genome Announc. 2015 Dec 23;3(6). pii: e01517-15. doi: 10.1128/genomeA.01517-15.

12.

Draft Genome Sequence of Acinetobacter calcoaceticus Strain GK1, a Hydrocarbon-Degrading Plant Growth-Promoting Rhizospheric Bacterium.

Gkorezis P, Bottos EM, Van Hamme JD, Franzetti A, Abbamondi GR, Balseiro-Romero M, Weyens N, Rineau F, Vangronsveld J.

Genome Announc. 2015 Aug 13;3(4). pii: e00909-15. doi: 10.1128/genomeA.00909-15.

13.

Sphingomonas taxi, Isolated from Cucurbita pepo, Proves to Be a DDE-Degrading and Plant Growth-Promoting Strain.

Eevers N, Van Hamme JD, Bottos EM, Weyens N, Vangronsveld J.

Genome Announc. 2015 May 14;3(3). pii: e00489-15. doi: 10.1128/genomeA.00489-15.

14.

Draft Genome Sequence of Methylobacterium radiotolerans, a DDE-Degrading and Plant Growth-Promoting Strain Isolated from Cucurbita pepo.

Eevers N, Van Hamme JD, Bottos EM, Weyens N, Vangronsveld J.

Genome Announc. 2015 May 14;3(3). pii: e00488-15. doi: 10.1128/genomeA.00488-15.

15.

Draft Genome Sequence of Enterobacter aerogenes, a DDE-Degrading and Plant Growth-Promoting Strain Isolated from Cucurbita pepo.

Eevers N, Van Hamme JD, Bottos EM, Weyens N, Vangronsveld J.

Genome Announc. 2015 Apr 16;3(2). pii: e00317-15. doi: 10.1128/genomeA.00317-15.

16.

Airborne bacterial populations above desert soils of the McMurdo Dry Valleys, Antarctica.

Bottos EM, Woo AC, Zawar-Reza P, Pointing SB, Cary SC.

Microb Ecol. 2014 Jan;67(1):120-8.

17.

Genomic and proteomic characterization of Gordonia sp. NB4-1Y in relation to 6 : 2 fluorotelomer sulfonate biodegradation.

Van Hamme JD, Bottos EM, Bilbey NJ, Brewer SE.

Microbiology. 2013 Aug;159(Pt 8):1618-28. doi: 10.1099/mic.0.068932-0. Epub 2013 Jun 6.

PMID:
23744905
18.

The Inter-Valley Soil Comparative Survey: the ecology of Dry Valley edaphic microbial communities.

Lee CK, Barbier BA, Bottos EM, McDonald IR, Cary SC.

ISME J. 2012 May;6(5):1046-57. doi: 10.1038/ismej.2011.170. Epub 2011 Dec 15.

19.

Prokaryotic diversity of arctic ice shelf microbial mats.

Bottos EM, Vincent WF, Greer CW, Whyte LG.

Environ Microbiol. 2008 Apr;10(4):950-66. doi: 10.1111/j.1462-2920.2007.01516.x. Epub 2008 Jan 22.

PMID:
18215157
20.

Development of a sensitive radiorespiration method for detecting microbial activity at subzero temperatures.

Steven B, Niederberger TD, Bottos EM, Dyen MR, Whyte LG.

J Microbiol Methods. 2007 Dec;71(3):275-80. Epub 2007 Sep 26.

PMID:
17942178

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