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Items: 29

1.

An outlook on using serial femtosecond crystallography in drug discovery.

Mishin A, Gusach A, Luginina A, Marin E, Borshchevskiy V, Cherezov V.

Expert Opin Drug Discov. 2019 Jun 11:1-13. doi: 10.1080/17460441.2019.1626822. [Epub ahead of print]

PMID:
31184514
2.

A thermostable flavin-based fluorescent protein from Chloroflexus aggregans: a framework for ultra-high resolution structural studies.

Nazarenko VV, Remeeva A, Yudenko A, Kovalev K, Dubenko A, Goncharov IM, Kuzmichev P, Rogachev AV, Buslaev P, Borshchevskiy V, Mishin A, Dhoke GV, Schwaneberg U, Davari MD, Jaeger KE, Krauss U, Gordeliy V, Gushchin I.

Photochem Photobiol Sci. 2019 Jul 10;18(7):1793-1805. doi: 10.1039/c9pp00067d.

PMID:
31116222
3.

Structure and mechanisms of sodium-pumping KR2 rhodopsin.

Kovalev K, Polovinkin V, Gushchin I, Alekseev A, Shevchenko V, Borshchevskiy V, Astashkin R, Balandin T, Bratanov D, Vaganova S, Popov A, Chupin V, Büldt G, Bamberg E, Gordeliy V.

Sci Adv. 2019 Apr 10;5(4):eaav2671. doi: 10.1126/sciadv.aav2671. eCollection 2019 Apr.

4.

Aspergillus fumigatus Infection-Induced Neutrophil Recruitment and Location in the Conducting Airway of Immunocompetent, Neutropenic, and Immunosuppressed Mice.

Shevchenko MA, Bogorodskiy AO, Troyanova NI, Servuli EA, Bolkhovitina EL, Büldt G, Fahlke C, Gordeliy VI, Gensch T, Borshchevskiy VI, Sapozhnikov AM.

J Immunol Res. 2018 Jan 18;2018:5379085. doi: 10.1155/2018/5379085. eCollection 2018.

5.

Efficient non-cytotoxic fluorescent staining of halophiles.

Maslov I, Bogorodskiy A, Mishin A, Okhrimenko I, Gushchin I, Kalenov S, Dencher NA, Fahlke C, Büldt G, Gordeliy V, Gensch T, Borshchevskiy V.

Sci Rep. 2018 Feb 7;8(1):2549. doi: 10.1038/s41598-018-20839-7.

6.

Chemically Stable Lipids for Membrane Protein Crystallization.

Ishchenko A, Peng L, Zinovev E, Vlasov A, Lee SC, Kuklin A, Mishin A, Borshchevskiy V, Zhang Q, Cherezov V.

Cryst Growth Des. 2017 Jun 7;17(6):3502-3511. doi: 10.1021/acs.cgd.7b00458. Epub 2017 May 12.

7.

Structural insights into ion conduction by channelrhodopsin 2.

Volkov O, Kovalev K, Polovinkin V, Borshchevskiy V, Bamann C, Astashkin R, Marin E, Popov A, Balandin T, Willbold D, Büldt G, Bamberg E, Gordeliy V.

Science. 2017 Nov 24;358(6366). pii: eaan8862. doi: 10.1126/science.aan8862.

PMID:
29170206
8.

Inward H+ pump xenorhodopsin: Mechanism and alternative optogenetic approach.

Shevchenko V, Mager T, Kovalev K, Polovinkin V, Alekseev A, Juettner J, Chizhov I, Bamann C, Vavourakis C, Ghai R, Gushchin I, Borshchevskiy V, Rogachev A, Melnikov I, Popov A, Balandin T, Rodriguez-Valera F, Manstein DJ, Bueldt G, Bamberg E, Gordeliy V.

Sci Adv. 2017 Sep 22;3(9):e1603187. doi: 10.1126/sciadv.1603187. eCollection 2017 Sep.

9.

Green fluorescent genetically encoded calcium indicator based on calmodulin/M13-peptide from fungi.

Barykina NV, Subach OM, Piatkevich KD, Jung EE, Malyshev AY, Smirnov IV, Bogorodskiy AO, Borshchevskiy VI, Varizhuk AM, Pozmogova GE, Boyden ES, Anokhin KV, Enikolopov GN, Subach FV.

PLoS One. 2017 Aug 24;12(8):e0183757. doi: 10.1371/journal.pone.0183757. eCollection 2017.

10.

Mechanism of transmembrane signaling by sensor histidine kinases.

Gushchin I, Melnikov I, Polovinkin V, Ishchenko A, Yuzhakova A, Buslaev P, Bourenkov G, Grudinin S, Round E, Balandin T, Borshchevskiy V, Willbold D, Leonard G, Büldt G, Popov A, Gordeliy V.

Science. 2017 Jun 9;356(6342). pii: eaah6345. doi: 10.1126/science.aah6345. Epub 2017 May 18.

PMID:
28522691
11.

Fast iodide-SAD phasing for high-throughput membrane protein structure determination.

Melnikov I, Polovinkin V, Kovalev K, Gushchin I, Shevtsov M, Shevchenko V, Mishin A, Alekseev A, Rodriguez-Valera F, Borshchevskiy V, Cherezov V, Leonard GA, Gordeliy V, Popov A.

Sci Adv. 2017 May 12;3(5):e1602952. doi: 10.1126/sciadv.1602952. eCollection 2017 May.

12.

Erratum to: High-Resolution Structure of a Membrane Protein Transferred from Amphipol to a Lipidic Mesophase.

Polovinkin V, Gushchin I, Sintsov M, Round E, Balandin T, Chervakov P, Shevchenko V, Utrobin P, Popov A, Borshchevskiy V, Mishin A, Kuklin A, Willbold D, Chupin V, Popot JL, Gordeliy V.

J Membr Biol. 2017 Apr;250(2):237. doi: 10.1007/s00232-017-9949-y. No abstract available.

PMID:
28229180
13.

New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.

Ishchenko A, Round E, Borshchevskiy V, Grudinin S, Gushchin I, Klare JP, Remeeva A, Polovinkin V, Utrobin P, Balandin T, Engelhard M, Büldt G, Gordeliy V.

Sci Rep. 2017 Feb 6;7:41811. doi: 10.1038/srep41811.

14.

Expression and purification of an engineered human endothelin receptor B in a monomeric form.

Mishin AV, Luginina AP, Potapenko AP, Borshchevskiy VI, Katritch V, Edelweiss E, Okhrimenko IS, Gordeliy VI, Cherezov VG.

Dokl Biochem Biophys. 2016 Mar;467(1):157-61. doi: 10.1134/S1607672916020216. Epub 2016 May 20.

PMID:
27193723
15.

Structure of the light-driven sodium pump KR2 and its implications for optogenetics.

Gushchin I, Shevchenko V, Polovinkin V, Borshchevskiy V, Buslaev P, Bamberg E, Gordeliy V.

FEBS J. 2016 Apr;283(7):1232-8. doi: 10.1111/febs.13585. Epub 2015 Nov 26.

16.

An Approach to Heterologous Expression of Membrane Proteins. The Case of Bacteriorhodopsin.

Bratanov D, Balandin T, Round E, Shevchenko V, Gushchin I, Polovinkin V, Borshchevskiy V, Gordeliy V.

PLoS One. 2015 Jun 5;10(6):e0128390. doi: 10.1371/journal.pone.0128390. eCollection 2015.

17.

Crystal structure of a light-driven sodium pump.

Gushchin I, Shevchenko V, Polovinkin V, Kovalev K, Alekseev A, Round E, Borshchevskiy V, Balandin T, Popov A, Gensch T, Fahlke C, Bamann C, Willbold D, Büldt G, Bamberg E, Gordeliy V.

Nat Struct Mol Biol. 2015 May;22(5):390-5. doi: 10.1038/nsmb.3002. Epub 2015 Apr 6.

PMID:
25849142
18.

Structural and functional investigation of flavin binding center of the NqrC subunit of sodium-translocating NADH:quinone oxidoreductase from Vibrio harveyi.

Borshchevskiy V, Round E, Bertsova Y, Polovinkin V, Gushchin I, Ishchenko A, Kovalev K, Mishin A, Kachalova G, Popov A, Bogachev A, Gordeliy V.

PLoS One. 2015 Mar 3;10(3):e0118548. doi: 10.1371/journal.pone.0118548. eCollection 2015.

19.

Crystal structure of Escherichia coli-expressed Haloarcula marismortui bacteriorhodopsin I in the trimeric form.

Shevchenko V, Gushchin I, Polovinkin V, Round E, Borshchevskiy V, Utrobin P, Popov A, Balandin T, Büldt G, Gordeliy V.

PLoS One. 2014 Dec 5;9(12):e112873. doi: 10.1371/journal.pone.0112873. eCollection 2014.

20.

Low-dose X-ray radiation induces structural alterations in proteins.

Borshchevskiy V, Round E, Erofeev I, Weik M, Ishchenko A, Gushchin I, Mishin A, Willbold D, Büldt G, Gordeliy V.

Acta Crystallogr D Biol Crystallogr. 2014 Oct;70(Pt 10):2675-85. doi: 10.1107/S1399004714017295. Epub 2014 Sep 27.

PMID:
25286851
21.

Nanoparticle surface-enhanced Raman scattering of bacteriorhodopsin stabilized by amphipol A8-35.

Polovinkin V, Balandin T, Volkov O, Round E, Borshchevskiy V, Utrobin P, von Stetten D, Royant A, Willbold D, Arzumanyan G, Chupin V, Popot JL, Gordeliy V.

J Membr Biol. 2014 Oct;247(9-10):971-80. doi: 10.1007/s00232-014-9701-9. Epub 2014 Sep 6.

PMID:
25192978
22.

High-resolution structure of a membrane protein transferred from amphipol to a lipidic mesophase.

Polovinkin V, Gushchin I, Sintsov M, Round E, Balandin T, Chervakov P, Shevchenko V, Utrobin P, Popov A, Borshchevskiy V, Mishin A, Kuklin A, Willbold D, Chupin V, Popot JL, Gordeliy V.

J Membr Biol. 2014 Oct;247(9-10):997-1004. doi: 10.1007/s00232-014-9700-x. Epub 2014 Sep 6. Erratum in: J Membr Biol. 2017 Apr;250(2):237.

PMID:
25192977
23.

X-ray structure of a CDP-alcohol phosphatidyltransferase membrane enzyme and insights into its catalytic mechanism.

Nogly P, Gushchin I, Remeeva A, Esteves AM, Borges N, Ma P, Ishchenko A, Grudinin S, Round E, Moraes I, Borshchevskiy V, Santos H, Gordeliy V, Archer M.

Nat Commun. 2014 Jun 19;5:4169. doi: 10.1038/ncomms5169.

PMID:
24942835
24.

Structural insights into the proton pumping by unusual proteorhodopsin from nonmarine bacteria.

Gushchin I, Chervakov P, Kuzmichev P, Popov AN, Round E, Borshchevskiy V, Ishchenko A, Petrovskaya L, Chupin V, Dolgikh DA, Arseniev AS, Kirpichnikov M, Gordeliy V.

Proc Natl Acad Sci U S A. 2013 Jul 30;110(31):12631-6. doi: 10.1073/pnas.1221629110. Epub 2013 Jul 19. Erratum in: Proc Natl Acad Sci U S A. 2013 Sep 3;110(36):14813. Arseniev, Alexander A [corrected to Arseniev, Alexander S].

25.

Ground state structure of D75N mutant of sensory rhodopsin II in complex with its cognate transducer.

Ishchenko A, Round E, Borshchevskiy V, Grudinin S, Gushchin I, Klare JP, Balandin T, Remeeva A, Engelhard M, Büldt G, Gordeliy V.

J Photochem Photobiol B. 2013 Jun 5;123:55-8. doi: 10.1016/j.jphotobiol.2013.03.008. Epub 2013 Mar 29.

PMID:
23619282
26.

Structural biology: Active arrestin proteins crystallized.

Borshchevskiy V, Büldt G.

Nature. 2013 May 2;497(7447):45-6. doi: 10.1038/nature12096. Epub 2013 Apr 24. No abstract available.

PMID:
23604255
27.

Active state of sensory rhodopsin II: structural determinants for signal transfer and proton pumping.

Gushchin I, Reshetnyak A, Borshchevskiy V, Ishchenko A, Round E, Grudinin S, Engelhard M, Büldt G, Gordeliy V.

J Mol Biol. 2011 Sep 30;412(4):591-600. doi: 10.1016/j.jmb.2011.07.022. Epub 2011 Aug 4.

PMID:
21840321
28.

X-ray-radiation-induced changes in bacteriorhodopsin structure.

Borshchevskiy VI, Round ES, Popov AN, Büldt G, Gordeliy VI.

J Mol Biol. 2011 Jun 24;409(5):813-25. doi: 10.1016/j.jmb.2011.04.038. Epub 2011 Apr 21.

PMID:
21530535
29.

Overcoming merohedral twinning in crystals of bacteriorhodopsin grown in lipidic mesophase.

Borshchevskiy V, Efremov R, Moiseeva E, Büldt G, Gordeliy V.

Acta Crystallogr D Biol Crystallogr. 2010 Jan;66(Pt 1):26-32. doi: 10.1107/S0907444909042838. Epub 2009 Dec 21.

PMID:
20057046

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