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Items: 35

1.

The proteasome biogenesis regulator Rpn4 cooperates with the unfolded protein response to promote ER stress resistance.

Schmidt RM, Schessner JP, Borner GH, Schuck S.

Elife. 2019 Mar 13;8. pii: e43244. doi: 10.7554/eLife.43244.

2.

Spatial proteomics: a powerful discovery tool for cell biology.

Lundberg E, Borner GHH.

Nat Rev Mol Cell Biol. 2019 May;20(5):285-302. doi: 10.1038/s41580-018-0094-y. Review.

PMID:
30659282
3.

Dynamic Organellar Maps for Spatial Proteomics.

Itzhak DN, Schessner JP, Borner GHH.

Curr Protoc Cell Biol. 2019 Jun;83(1):e81. doi: 10.1002/cpcb.81. Epub 2018 Nov 29.

PMID:
30489039
4.

Organellar Proteomics and Phospho-Proteomics Reveal Subcellular Reorganization in Diet-Induced Hepatic Steatosis.

Krahmer N, Najafi B, Schueder F, Quagliarini F, Steger M, Seitz S, Kasper R, Salinas F, Cox J, Uhlenhaut NH, Walther TC, Jungmann R, Zeigerer A, Borner GHH, Mann M.

Dev Cell. 2018 Oct 22;47(2):205-221.e7. doi: 10.1016/j.devcel.2018.09.017.

PMID:
30352176
5.

AP-4 vesicles contribute to spatial control of autophagy via RUSC-dependent peripheral delivery of ATG9A.

Davies AK, Itzhak DN, Edgar JR, Archuleta TL, Hirst J, Jackson LP, Robinson MS, Borner GHH.

Nat Commun. 2018 Sep 27;9(1):3958. doi: 10.1038/s41467-018-06172-7.

6.

SHRED Is a Regulatory Cascade that Reprograms Ubr1 Substrate Specificity for Enhanced Protein Quality Control during Stress.

Szoradi T, Schaeff K, Garcia-Rivera EM, Itzhak DN, Schmidt RM, Bircham PW, Leiss K, Diaz-Miyar J, Chen VK, Muzzey D, Borner GHH, Schuck S.

Mol Cell. 2018 Jun 21;70(6):1025-1037.e5. doi: 10.1016/j.molcel.2018.04.027. Epub 2018 May 31.

7.

The ER membrane protein complex interacts cotranslationally to enable biogenesis of multipass membrane proteins.

Shurtleff MJ, Itzhak DN, Hussmann JA, Schirle Oakdale NT, Costa EA, Jonikas M, Weibezahn J, Popova KD, Jan CH, Sinitcyn P, Vembar SS, Hernandez H, Cox J, Burlingame AL, Brodsky JL, Frost A, Borner GH, Weissman JS.

Elife. 2018 May 29;7. pii: e37018. doi: 10.7554/eLife.37018.

8.

Clathrin heavy chain 22 contributes to the control of neuropeptide degradation and secretion during neuronal development.

Nahorski MS, Borner GHH, Shaikh SS, Davies AK, Al-Gazali L, Antrobus R, Woods CG.

Sci Rep. 2018 Feb 5;8(1):2340. doi: 10.1038/s41598-018-19980-0.

9.

Role of the AP-5 adaptor protein complex in late endosome-to-Golgi retrieval.

Hirst J, Itzhak DN, Antrobus R, Borner GHH, Robinson MS.

PLoS Biol. 2018 Jan 30;16(1):e2004411. doi: 10.1371/journal.pbio.2004411. eCollection 2018 Jan.

10.

A Mass Spectrometry-Based Approach for Mapping Protein Subcellular Localization Reveals the Spatial Proteome of Mouse Primary Neurons.

Itzhak DN, Davies C, Tyanova S, Mishra A, Williamson J, Antrobus R, Cox J, Weekes MP, Borner GHH.

Cell Rep. 2017 Sep 12;20(11):2706-2718. doi: 10.1016/j.celrep.2017.08.063.

11.

Role of clathrin in dense core vesicle biogenesis.

Sahu BS, Manna PT, Edgar JR, Antrobus R, Mahata SK, Bartolomucci A, Borner GHH, Robinson MS.

Mol Biol Cell. 2017 Oct 1;28(20):2676-2685. doi: 10.1091/mbc.E16-10-0742. Epub 2017 Aug 16.

12.

Global, quantitative and dynamic mapping of protein subcellular localization.

Itzhak DN, Tyanova S, Cox J, Borner GH.

Elife. 2016 Jun 9;5. pii: e16950. doi: 10.7554/eLife.16950.

13.

Molecular Basis for the Interaction Between AP4 β4 and its Accessory Protein, Tepsin.

Frazier MN, Davies AK, Voehler M, Kendall AK, Borner GH, Chazin WJ, Robinson MS, Jackson LP.

Traffic. 2016 Apr;17(4):400-15. doi: 10.1111/tra.12375. Epub 2016 Mar 4.

14.

Contributions of epsinR and gadkin to clathrin-mediated intracellular trafficking.

Hirst J, Edgar JR, Borner GH, Li S, Sahlender DA, Antrobus R, Robinson MS.

Mol Biol Cell. 2015 Sep 1;26(17):3085-103. doi: 10.1091/mbc.E15-04-0245. Epub 2015 Jul 15.

15.

A novel disorder reveals clathrin heavy chain-22 is essential for human pain and touch development.

Nahorski MS, Al-Gazali L, Hertecant J, Owen DJ, Borner GH, Chen YC, Benn CL, Carvalho OP, Shaikh SS, Phelan A, Robinson MS, Royle SJ, Woods CG.

Brain. 2015 Aug;138(Pt 8):2147-60. doi: 10.1093/brain/awv149. Epub 2015 Jun 11.

16.

Isolation of clathrin-coated vesicles from tissue culture cells.

Borner GH, Fielding AB.

Cold Spring Harb Protoc. 2014 Nov 3;2014(11):1136-8. doi: 10.1101/pdb.top074435.

PMID:
25368317
17.

Using in-solution digestion, peptide fractionation, and a Q exactive mass spectrometer to analyze the proteome of clathrin-coated vesicles.

Borner GH, Fielding AB.

Cold Spring Harb Protoc. 2014 Nov 3;2014(11):1192-5. doi: 10.1101/pdb.prot084137.

PMID:
25368314
18.

Using in-gel digestion and an Orbitrap mass spectrometer to analyze the proteome of clathrin-coated vesicles.

Borner GH, Fielding AB.

Cold Spring Harb Protoc. 2014 Nov 3;2014(11):1188-91. doi: 10.1101/pdb.prot083154.

PMID:
25368313
19.

Isolating HeLa cell fractions enriched for clathrin-coated vesicles.

Borner GH, Fielding AB.

Cold Spring Harb Protoc. 2014 Nov 3;2014(11):1184-7. doi: 10.1101/pdb.prot083147.

PMID:
25368312
20.

Fractionation profiling: a fast and versatile approach for mapping vesicle proteomes and protein-protein interactions.

Borner GH, Hein MY, Hirst J, Edgar JR, Mann M, Robinson MS.

Mol Biol Cell. 2014 Oct 15;25(20):3178-94. doi: 10.1091/mbc.E14-07-1198. Epub 2014 Aug 27.

21.

Interaction between AP-5 and the hereditary spastic paraplegia proteins SPG11 and SPG15.

Hirst J, Borner GH, Edgar J, Hein MY, Mann M, Buchholz F, Antrobus R, Robinson MS.

Mol Biol Cell. 2013 Aug;24(16):2558-69. doi: 10.1091/mbc.E13-03-0170. Epub 2013 Jul 3.

22.

Adaptor protein complexes AP-4 and AP-5: new players in endosomal trafficking and progressive spastic paraplegia.

Hirst J, Irving C, Borner GH.

Traffic. 2013 Feb;14(2):153-64. doi: 10.1111/tra.12028. Epub 2012 Dec 7. Review.

23.

Distinct and overlapping roles for AP-1 and GGAs revealed by the "knocksideways" system.

Hirst J, Borner GH, Antrobus R, Peden AA, Hodson NA, Sahlender DA, Robinson MS.

Curr Biol. 2012 Sep 25;22(18):1711-6. doi: 10.1016/j.cub.2012.07.012. Epub 2012 Aug 16.

24.

Multivariate proteomic profiling identifies novel accessory proteins of coated vesicles.

Borner GH, Antrobus R, Hirst J, Bhumbra GS, Kozik P, Jackson LP, Sahlender DA, Robinson MS.

J Cell Biol. 2012 Apr 2;197(1):141-60. doi: 10.1083/jcb.201111049.

25.

Improved elution conditions for native co-immunoprecipitation.

Antrobus R, Borner GH.

PLoS One. 2011 Mar 23;6(3):e18218. doi: 10.1371/journal.pone.0018218.

26.

Auxilin depletion causes self-assembly of clathrin into membraneless cages in vivo.

Hirst J, Sahlender DA, Li S, Lubben NB, Borner GH, Robinson MS.

Traffic. 2008 Aug;9(8):1354-71. doi: 10.1111/j.1600-0854.2008.00764.x. Epub 2008 May 17.

27.

CVAK104 is a novel regulator of clathrin-mediated SNARE sorting.

Borner GH, Rana AA, Forster R, Harbour M, Smith JC, Robinson MS.

Traffic. 2007 Jul;8(7):893-903.

28.

Comparative proteomics of clathrin-coated vesicles.

Borner GH, Harbour M, Hester S, Lilley KS, Robinson MS.

J Cell Biol. 2006 Nov 20;175(4):571-8.

29.

COBRA, an Arabidopsis extracellular glycosyl-phosphatidyl inositol-anchored protein, specifically controls highly anisotropic expansion through its involvement in cellulose microfibril orientation.

Roudier F, Fernandez AG, Fujita M, Himmelspach R, Borner GH, Schindelman G, Song S, Baskin TI, Dupree P, Wasteneys GO, Benfey PN.

Plant Cell. 2005 Jun;17(6):1749-63. Epub 2005 Apr 22.

30.

The aftiphilin/p200/gamma-synergin complex.

Hirst J, Borner GH, Harbour M, Robinson MS.

Mol Biol Cell. 2005 May;16(5):2554-65. Epub 2005 Mar 9.

31.

Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts.

Borner GH, Sherrier DJ, Weimar T, Michaelson LV, Hawkins ND, Macaskill A, Napier JA, Beale MH, Lilley KS, Dupree P.

Plant Physiol. 2005 Jan;137(1):104-16. Epub 2004 Dec 23.

32.

Glycosylphosphatidylinositol lipid anchoring of plant proteins. Sensitive prediction from sequence- and genome-wide studies for Arabidopsis and rice.

Eisenhaber B, Wildpaner M, Schultz CJ, Borner GH, Dupree P, Eisenhaber F.

Plant Physiol. 2003 Dec;133(4):1691-701.

33.

SETH1 and SETH2, two components of the glycosylphosphatidylinositol anchor biosynthetic pathway, are required for pollen germination and tube growth in Arabidopsis.

Lalanne E, Honys D, Johnson A, Borner GH, Lilley KS, Dupree P, Grossniklaus U, Twell D.

Plant Cell. 2004 Jan;16(1):229-40. Epub 2003 Dec 11.

34.

Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis.

Borner GH, Lilley KS, Stevens TJ, Dupree P.

Plant Physiol. 2003 Jun;132(2):568-77. Epub 2003 May 1.

35.

Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis.

Borner GH, Sherrier DJ, Stevens TJ, Arkin IT, Dupree P.

Plant Physiol. 2002 Jun;129(2):486-99.

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