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Spatial Ecology of the Human Tongue Dorsum Microbiome.

Wilbert SA, Mark Welch JL, Borisy GG.

Cell Rep. 2020 Mar 24;30(12):4003-4015.e3. doi: 10.1016/j.celrep.2020.02.097.


Semi-blind sparse affine spectral unmixing of autofluorescence-contaminated micrographs.

Rossetti BJ, Wilbert SA, Mark Welch JL, Borisy GG, Nagy JG.

Bioinformatics. 2020 Feb 1;36(3):910-917. doi: 10.1093/bioinformatics/btz674.


Biogeography of the Oral Microbiome: The Site-Specialist Hypothesis.

Mark Welch JL, Dewhirst FE, Borisy GG.

Annu Rev Microbiol. 2019 Sep 8;73:335-358. doi: 10.1146/annurev-micro-090817-062503. Epub 2019 Jun 10.


Systematic evasion of the restriction-modification barrier in bacteria.

Johnston CD, Cotton SL, Rittling SR, Starr JR, Borisy GG, Dewhirst FE, Lemon KP.

Proc Natl Acad Sci U S A. 2019 Jun 4;116(23):11454-11459. doi: 10.1073/pnas.1820256116. Epub 2019 May 16.


Lévy-like movement patterns of metastatic cancer cells revealed in microfabricated systems and implicated in vivo.

Huda S, Weigelin B, Wolf K, Tretiakov KV, Polev K, Wilk G, Iwasa M, Emami FS, Narojczyk JW, Banaszak M, Soh S, Pilans D, Vahid A, Makurath M, Friedl P, Borisy GG, Kandere-Grzybowska K, Grzybowski BA.

Nat Commun. 2018 Oct 31;9(1):4539. doi: 10.1038/s41467-018-06563-w.


Preservation of three-dimensional spatial structure in the gut microbiome.

Hasegawa Y, Mark Welch JL, Rossetti BJ, Borisy GG.

PLoS One. 2017 Nov 27;12(11):e0188257. doi: 10.1371/journal.pone.0188257. eCollection 2017.


Spatial organization of a model 15-member human gut microbiota established in gnotobiotic mice.

Mark Welch JL, Hasegawa Y, McNulty NP, Gordon JI, Borisy GG.

Proc Natl Acad Sci U S A. 2017 Oct 24;114(43):E9105-E9114. doi: 10.1073/pnas.1711596114. Epub 2017 Oct 9.


Report of the National Heart, Lung, and Blood Institute Working Group on the Role of Microbiota in Blood Pressure Regulation: Current Status and Future Directions.

Raizada MK, Joe B, Bryan NS, Chang EB, Dewhirst FE, Borisy GG, Galis ZS, Henderson W, Jose PA, Ketchum CJ, Lampe JW, Pepine CJ, Pluznick JL, Raj D, Seals DR, Gioscia-Ryan RA, Tang WHW, Oh YS.

Hypertension. 2017 Jul 31. pii: HYPERTENSIONAHA.117.09699. doi: 10.1161/HYPERTENSIONAHA.117.09699. [Epub ahead of print] Review. No abstract available.


Multiplexed Spectral Imaging of 120 Different Fluorescent Labels.

Valm AM, Oldenbourg R, Borisy GG.

PLoS One. 2016 Jul 8;11(7):e0158495. doi: 10.1371/journal.pone.0158495. eCollection 2016.


Individuality, Stability, and Variability of the Plaque Microbiome.

Utter DR, Mark Welch JL, Borisy GG.

Front Microbiol. 2016 Apr 22;7:564. doi: 10.3389/fmicb.2016.00564. eCollection 2016.


Biogeography of a human oral microbiome at the micron scale.

Mark Welch JL, Rossetti BJ, Rieken CW, Dewhirst FE, Borisy GG.

Proc Natl Acad Sci U S A. 2016 Feb 9;113(6):E791-800. doi: 10.1073/pnas.1522149113. Epub 2016 Jan 25.


Centrosome nucleates numerous ephemeral microtubules and only few of them participate in the radial array.

Alieva IB, Berezinskaya T, Borisy GG, Vorobjev IA.

Cell Biol Int. 2015 Nov;39(11):1203-16. doi: 10.1002/cbin.10492. Epub 2015 Jul 7.


Microbiota organization is a distinct feature of proximal colorectal cancers.

Dejea CM, Wick EC, Hechenbleikner EM, White JR, Mark Welch JL, Rossetti BJ, Peterson SN, Snesrud EC, Borisy GG, Lazarev M, Stein E, Vadivelu J, Roslani AC, Malik AA, Wanyiri JW, Goh KL, Thevambiga I, Fu K, Wan F, Llosa N, Housseau F, Romans K, Wu X, McAllister FM, Wu S, Vogelstein B, Kinzler KW, Pardoll DM, Sears CL.

Proc Natl Acad Sci U S A. 2014 Dec 23;111(51):18321-6. doi: 10.1073/pnas.1406199111. Epub 2014 Dec 8.


Dynamics of tongue microbial communities with single-nucleotide resolution using oligotyping.

Mark Welch JL, Utter DR, Rossetti BJ, Mark Welch DB, Eren AM, Borisy GG.

Front Microbiol. 2014 Nov 7;5:568. doi: 10.3389/fmicb.2014.00568. eCollection 2014.


Oligotyping analysis of the human oral microbiome.

Eren AM, Borisy GG, Huse SM, Mark Welch JL.

Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):E2875-84. doi: 10.1073/pnas.1409644111. Epub 2014 Jun 25.


An image-based, dual fluorescence reporter assay to evaluate the efficacy of shRNA for gene silencing at the single-cell level.

Kojima S, Borisy GG.

F1000Res. 2014 Feb 19;3:60. doi: 10.12688/f1000research.3-60.v1. eCollection 2014.


Microtubule guidance tested through controlled cell geometry.

Huda S, Soh S, Pilans D, Byrska-Bishop M, Kim J, Wilk G, Borisy GG, Kandere-Grzybowska K, Grzybowski BA.

J Cell Sci. 2012 Dec 1;125(Pt 23):5790-9. doi: 10.1242/jcs.110494. Epub 2012 Sep 19.


CLASI-FISH: principles of combinatorial labeling and spectral imaging.

Valm AM, Mark Welch JL, Borisy GG.

Syst Appl Microbiol. 2012 Dec;35(8):496-502. doi: 10.1016/j.syapm.2012.03.004. Epub 2012 Apr 21.


Systems-level analysis of microbial community organization through combinatorial labeling and spectral imaging.

Valm AM, Mark Welch JL, Rieken CW, Hasegawa Y, Sogin ML, Oldenbourg R, Dewhirst FE, Borisy GG.

Proc Natl Acad Sci U S A. 2011 Mar 8;108(10):4152-7. doi: 10.1073/pnas.1101134108. Epub 2011 Feb 16.


Phosphorylation controls autoinhibition of cytoplasmic linker protein-170.

Lee HS, Komarova YA, Nadezhdina ES, Anjum R, Peloquin JG, Schober JM, Danciu O, van Haren J, Galjart N, Gygi SP, Akhmanova A, Borisy GG.

Mol Biol Cell. 2010 Aug 1;21(15):2661-73. doi: 10.1091/mbc.E09-12-1036. Epub 2010 Jun 2.


Migration and actin protrusion in melanoma cells are regulated by EB1 protein.

Schober JM, Cain JM, Komarova YA, Borisy GG.

Cancer Lett. 2009 Oct 18;284(1):30-6. doi: 10.1016/j.canlet.2009.04.007. Epub 2009 May 7.


Thomas Hunt Morgan at the marine biological laboratory: naturalist and experimentalist.

Kenney DE, Borisy GG.

Genetics. 2009 Mar;181(3):841-6. doi: 10.1534/genetics.109.101659. No abstract available.


Mammalian end binding proteins control persistent microtubule growth.

Komarova Y, De Groot CO, Grigoriev I, Gouveia SM, Munteanu EL, Schober JM, Honnappa S, Buey RM, Hoogenraad CC, Dogterom M, Borisy GG, Steinmetz MO, Akhmanova A.

J Cell Biol. 2009 Mar 9;184(5):691-706. doi: 10.1083/jcb.200807179. Epub 2009 Mar 2.


[The spatial organization of centrosome-attached and free microtubules in 3T3 fibroblasts].

Alieva IB, Borisy GG, Vorob'ev IA.

Tsitologiia. 2008;50(11):936-46. Russian.


Signaling function of alpha-catenin in microtubule regulation.

Shtutman M, Chausovsky A, Prager-Khoutorsky M, Schiefermeier N, Boguslavsky S, Kam Z, Fuchs E, Geiger B, Borisy GG, Bershadsky AD.

Cell Cycle. 2008 Aug;7(15):2377-83. Epub 2008 May 30.


Performance of a population of independent filaments in lamellipodial protrusion.

Schaus TE, Borisy GG.

Biophys J. 2008 Aug;95(3):1393-411. doi: 10.1529/biophysj.107.125005. Epub 2008 Apr 4.


Intrinsic dynamic behavior of fascin in filopodia.

Aratyn YS, Schaus TE, Taylor EW, Borisy GG.

Mol Biol Cell. 2007 Oct;18(10):3928-40. Epub 2007 Aug 1.


Ena/VASP proteins have an anti-capping independent function in filopodia formation.

Applewhite DA, Barzik M, Kojima S, Svitkina TM, Gertler FB, Borisy GG.

Mol Biol Cell. 2007 Jul;18(7):2579-91. Epub 2007 May 2.


Self-organization of actin filament orientation in the dendritic-nucleation/array-treadmilling model.

Schaus TE, Taylor EW, Borisy GG.

Proc Natl Acad Sci U S A. 2007 Apr 24;104(17):7086-91. Epub 2007 Apr 17.


Microtubule-targeting-dependent reorganization of filopodia.

Schober JM, Komarova YA, Chaga OY, Akhmanova A, Borisy GG.

J Cell Sci. 2007 Apr 1;120(Pt 7):1235-44. Epub 2007 Mar 13.


Kinetic-structural analysis of neuronal growth cone veil motility.

Mongiu AK, Weitzke EL, Chaga OY, Borisy GG.

J Cell Sci. 2007 Mar 15;120(Pt 6):1113-25. Epub 2007 Feb 27.


Role of fascin in filopodial protrusion.

Vignjevic D, Kojima S, Aratyn Y, Danciu O, Svitkina T, Borisy GG.

J Cell Biol. 2006 Sep 11;174(6):863-75.


In vitro assembly of filopodia-like bundles.

Vignjevic D, Peloquin J, Borisy GG.

Methods Enzymol. 2006;406:727-39.


Molecular dynamics imaging in micropatterned living cells.

Kandere-Grzybowska K, Campbell C, Komarova Y, Grzybowski BA, Borisy GG.

Nat Methods. 2005 Oct;2(10):739-41.


EB1 and EB3 control CLIP dissociation from the ends of growing microtubules.

Komarova Y, Lansbergen G, Galjart N, Grosveld F, Borisy GG, Akhmanova A.

Mol Biol Cell. 2005 Nov;16(11):5334-45. Epub 2005 Sep 7.


Conformational changes in CLIP-170 regulate its binding to microtubules and dynactin localization.

Lansbergen G, Komarova Y, Modesti M, Wyman C, Hoogenraad CC, Goodson HV, Lemaitre RP, Drechsel DN, van Munster E, Gadella TW Jr, Grosveld F, Galjart N, Borisy GG, Akhmanova A.

J Cell Biol. 2004 Sep 27;166(7):1003-14. Epub 2004 Sep 20.


Lamellipodial versus filopodial mode of the actin nanomachinery: pivotal role of the filament barbed end.

Mejillano MR, Kojima S, Applewhite DA, Gertler FB, Svitkina TM, Borisy GG.

Cell. 2004 Aug 6;118(3):363-73.


A Rickettsia WASP-like protein activates the Arp2/3 complex and mediates actin-based motility.

Jeng RL, Goley ED, D'Alessio JA, Chaga OY, Svitkina TM, Borisy GG, Heinzen RA, Welch MD.

Cell Microbiol. 2004 Aug;6(8):761-9.


Critical role of Ena/VASP proteins for filopodia formation in neurons and in function downstream of netrin-1.

Lebrand C, Dent EW, Strasser GA, Lanier LM, Krause M, Svitkina TM, Borisy GG, Gertler FB.

Neuron. 2004 Apr 8;42(1):37-49.


Improved silencing vector co-expressing GFP and small hairpin RNA.

Kojima S, Vignjevic D, Borisy GG.

Biotechniques. 2004 Jan;36(1):74-9.


Orientational order of the lamellipodial actin network as demonstrated in living motile cells.

Verkhovsky AB, Chaga OY, Schaub S, Svitkina TM, Meister JJ, Borisy GG.

Mol Biol Cell. 2003 Nov;14(11):4667-75. Epub 2003 Sep 17.


Microtubule dynamics in living cells: direct analysis in the internal cytoplasm.

Vorobjev IA, Alieva IB, Grigoriev IS, Borisy GG.

Cell Biol Int. 2003;27(3):293-4. No abstract available.


Formation of filopodia-like bundles in vitro from a dendritic network.

Vignjevic D, Yarar D, Welch MD, Peloquin J, Svitkina T, Borisy GG.

J Cell Biol. 2003 Mar 17;160(6):951-62.


Cellular motility driven by assembly and disassembly of actin filaments.

Pollard TD, Borisy GG.

Cell. 2003 Feb 21;112(4):453-65. Review. Erratum in: Cell. 2003 May 16;113(4):549.


Mechanism of filopodia initiation by reorganization of a dendritic network.

Svitkina TM, Bulanova EA, Chaga OY, Vignjevic DM, Kojima S, Vasiliev JM, Borisy GG.

J Cell Biol. 2003 Feb 3;160(3):409-21.


Cytoplasmic linker proteins promote microtubule rescue in vivo.

Komarova YA, Akhmanova AS, Kojima S, Galjart N, Borisy GG.

J Cell Biol. 2002 Nov 25;159(4):589-99.


Self-organization of treadmilling microtubules into a polar array.

Maly IV, Borisy GG.

Trends Cell Biol. 2002 Oct;12(10):462-5. Review.


Visualization of the intracellular behavior of HIV in living cells.

McDonald D, Vodicka MA, Lucero G, Svitkina TM, Borisy GG, Emerman M, Hope TJ.

J Cell Biol. 2002 Nov 11;159(3):441-52. Epub 2002 Nov 4.


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