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Gut microbiota diversity across ethnicities in the United States.

Brooks AW, Priya S, Blekhman R, Bordenstein SR.

PLoS Biol. 2018 Dec 4;16(12):e2006842. doi: 10.1371/journal.pbio.2006842. eCollection 2018 Dec.


Distinct mucosal microbial communities in infants with surgical necrotizing enterocolitis correlate with age and antibiotic exposure.

Romano-Keeler J, Shilts MH, Tovchigrechko A, Wang C, Brucker RM, Moore DJ, Fonnesbeck C, Meng S, Correa H, Lovvorn HN 3rd, Tang YW, Hooper L, Bordenstein SR, Das SR, Weitkamp JH.

PLoS One. 2018 Oct 26;13(10):e0206366. doi: 10.1371/journal.pone.0206366. eCollection 2018.


Microbe Profile: Wolbachia: a sex selector, a viral protector and a target to treat filarial nematodes.

Taylor MJ, Bordenstein SR, Slatko B.

Microbiology. 2018 Nov;164(11):1345-1347. doi: 10.1099/mic.0.000724. Epub 2018 Oct 12.


Microbial Misandry: Discovery of a Spiroplasma Male-Killing Toxin.

Perlmutter JI, Bordenstein SR.

Cell Host Microbe. 2018 Jun 13;23(6):689-690. doi: 10.1016/j.chom.2018.05.011.


The Maternal Effect Gene Wds Controls Wolbachia Titer in Nasonia.

Funkhouser-Jones LJ, van Opstal EJ, Sharma A, Bordenstein SR.

Curr Biol. 2018 Jun 4;28(11):1692-1702.e6. doi: 10.1016/j.cub.2018.04.010. Epub 2018 May 17.


One prophage WO gene rescues cytoplasmic incompatibility in Drosophila melanogaster.

Shropshire JD, On J, Layton EM, Zhou H, Bordenstein SR.

Proc Natl Acad Sci U S A. 2018 May 8;115(19):4987-4991. doi: 10.1073/pnas.1800650115. Epub 2018 Apr 23.


Evolutionary Genetics of Cytoplasmic Incompatibility Genes cifA and cifB in Prophage WO of Wolbachia.

Lindsey ARI, Rice DW, Bordenstein SR, Brooks AW, Bordenstein SR, Newton ILG.

Genome Biol Evol. 2018 Feb 1;10(2):434-451. doi: 10.1093/gbe/evy012.


Microbial communities exhibit host species distinguishability and phylosymbiosis along the length of the gastrointestinal tract.

Kohl KD, Dearing MD, Bordenstein SR.

Mol Ecol. 2018 Apr;27(8):1874-1883. doi: 10.1111/mec.14460. Epub 2017 Dec 29.


Gut microbes limit growth in house sparrow nestlings (Passer domesticus) but not through limitations in digestive capacity.

Kohl KD, Brun A, Bordenstein SR, Caviedes-Vidal E, Karasov WH.

Integr Zool. 2018 Mar;13(2):139-151. doi: 10.1111/1749-4877.12289.


Chromosomal localization of Wolbachia inserts in the genomes of two subspecies of Chorthippus parallelus forming a Pyrenean hybrid zone.

Toribio-Fernández R, Bella JL, Martínez-Rodríguez P, Funkhouser-Jones LJ, Bordenstein SR, Pita M.

Chromosome Res. 2017 Oct;25(3-4):215-225. doi: 10.1007/s10577-017-9557-9. Epub 2017 May 5.


Prophage WO genes recapitulate and enhance Wolbachia-induced cytoplasmic incompatibility.

LePage DP, Metcalf JA, Bordenstein SR, On J, Perlmutter JI, Shropshire JD, Layton EM, Funkhouser-Jones LJ, Beckmann JF, Bordenstein SR.

Nature. 2017 Mar 9;543(7644):243-247. doi: 10.1038/nature21391. Epub 2017 Feb 27.


Association of oral microbiome with type 2 diabetes risk.

Long J, Cai Q, Steinwandel M, Hargreaves MK, Bordenstein SR, Blot WJ, Zheng W, Shu XO.

J Periodontal Res. 2017 Jun;52(3):636-643. doi: 10.1111/jre.12432. Epub 2017 Feb 8.


Establishment of F1 hybrid mortality in real time.

Saulsberry A, Pinchas M, Noll A, Lynch JA, Bordenstein SR, Brucker RM.

BMC Evol Biol. 2017 Jan 26;17(1):37. doi: 10.1186/s12862-017-0879-1.


Correction: Phylosymbiosis: Relationships and Functional Effects of Microbial Communities across Host Evolutionary History.

Brooks AW, Kohl KD, Brucker RM, van Opstal EJ, Bordenstein SR.

PLoS Biol. 2017 Jan 9;15(1):e1002587. doi: 10.1371/journal.pbio.1002587. eCollection 2017 Jan.


Gut microbial ecology of lizards: insights into diversity in the wild, effects of captivity, variation across gut regions and transmission.

Kohl KD, Brun A, Magallanes M, Brinkerhoff J, Laspiur A, Acosta JC, Caviedes-Vidal E, Bordenstein SR.

Mol Ecol. 2017 Feb;26(4):1175-1189. doi: 10.1111/mec.13921. Epub 2016 Dec 14.


Phylosymbiosis: Relationships and Functional Effects of Microbial Communities across Host Evolutionary History.

Brooks AW, Kohl KD, Brucker RM, van Opstal EJ, Bordenstein SR.

PLoS Biol. 2016 Nov 18;14(11):e2000225. doi: 10.1371/journal.pbio.2000225. eCollection 2016 Nov. Erratum in: PLoS Biol. 2017 Jan 9;15(1):e1002587.


Getting the Hologenome Concept Right: an Eco-Evolutionary Framework for Hosts and Their Microbiomes.

Theis KR, Dheilly NM, Klassen JL, Brucker RM, Baines JF, Bosch TC, Cryan JF, Gilbert SF, Goodnight CJ, Lloyd EA, Sapp J, Vandenkoornhuyse P, Zilber-Rosenberg I, Rosenberg E, Bordenstein SR.

mSystems. 2016 Mar 29;1(2). pii: e00028-16. eCollection 2016 Mar-Apr.


Eukaryotic association module in phage WO genomes from Wolbachia.

Bordenstein SR, Bordenstein SR.

Nat Commun. 2016 Oct 11;7:13155. doi: 10.1038/ncomms13155.


Disentangling a Holobiont - Recent Advances and Perspectives in Nasonia Wasps.

Dittmer J, van Opstal EJ, Shropshire JD, Bordenstein SR, Hurst GD, Brucker RM.

Front Microbiol. 2016 Sep 23;7:1478. eCollection 2016. Review.


An optimized approach to germ-free rearing in the jewel wasp Nasonia.

Shropshire JD, van Opstal EJ, Bordenstein SR.

PeerJ. 2016 Aug 9;4:e2316. doi: 10.7717/peerj.2316. eCollection 2016.


Fecal Transplants: What Is Being Transferred?

Bojanova DP, Bordenstein SR.

PLoS Biol. 2016 Jul 12;14(7):e1002503. doi: 10.1371/journal.pbio.1002503. eCollection 2016 Jul.


Physiological and microbial adjustments to diet quality permit facultative herbivory in an omnivorous lizard.

Kohl KD, Brun A, Magallanes M, Brinkerhoff J, Laspiur A, Acosta JC, Bordenstein SR, Caviedes-Vidal E.

J Exp Biol. 2016 Jun 15;219(Pt 12):1903-12. doi: 10.1242/jeb.138370.


Comparative Genomics of Two Closely Related Wolbachia with Different Reproductive Effects on Hosts.

Newton IL, Clark ME, Kent BN, Bordenstein SR, Qu J, Richards S, Kelkar YD, Werren JH.

Genome Biol Evol. 2016 Jun 3;8(5):1526-42. doi: 10.1093/gbe/evw096.


Wolbachia mosquito control: Regulated.

Dobson SL, Bordenstein SR, Rose RI.

Science. 2016 Apr 29;352(6285):526-7. doi: 10.1126/science.352.6285.526-b. No abstract available.


Airway bacteria drive a progressive COPD-like phenotype in mice with polymeric immunoglobulin receptor deficiency.

Richmond BW, Brucker RM, Han W, Du RH, Zhang Y, Cheng DS, Gleaves L, Abdolrasulnia R, Polosukhina D, Clark PE, Bordenstein SR, Blackwell TS, Polosukhin VV.

Nat Commun. 2016 Apr 5;7:11240. doi: 10.1038/ncomms11240.


Speciation by Symbiosis: the Microbiome and Behavior.

Shropshire JD, Bordenstein SR.

MBio. 2016 Mar 31;7(2):e01785. doi: 10.1128/mBio.01785-15. Review.


Wolbachia co-infection in a hybrid zone: discovery of horizontal gene transfers from two Wolbachia supergroups into an animal genome.

Funkhouser-Jones LJ, Sehnert SR, Martínez-Rodríguez P, Toribio-Fernández R, Pita M, Bella JL, Bordenstein SR.

PeerJ. 2015 Dec 7;3:e1479. doi: 10.7717/peerj.1479. eCollection 2015.


MICROBIOME. Rethinking heritability of the microbiome.

van Opstal EJ, Bordenstein SR.

Science. 2015 Sep 11;349(6253):1172-3. doi: 10.1126/science.aab3958. No abstract available.


Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes.

Bordenstein SR, Theis KR.

PLoS Biol. 2015 Aug 18;13(8):e1002226. doi: 10.1371/journal.pbio.1002226. eCollection 2015 Aug.


Bile diversion to the distal small intestine has comparable metabolic benefits to bariatric surgery.

Flynn CR, Albaugh VL, Cai S, Cheung-Flynn J, Williams PE, Brucker RM, Bordenstein SR, Guo Y, Wasserman DH, Abumrad NN.

Nat Commun. 2015 Jul 21;6:7715. doi: 10.1038/ncomms8715.


Tandem-repeat protein domains across the tree of life.

Jernigan KK, Bordenstein SR.

PeerJ. 2015 Jan 13;3:e732. doi: 10.7717/peerj.732. eCollection 2015.


The relative importance of DNA methylation and Dnmt2-mediated epigenetic regulation on Wolbachia densities and cytoplasmic incompatibility.

LePage DP, Jernigan KK, Bordenstein SR.

PeerJ. 2014 Dec 9;2:e678. doi: 10.7717/peerj.678. eCollection 2014.


Antibacterial gene transfer across the tree of life.

Metcalf JA, Funkhouser-Jones LJ, Brileya K, Reysenbach AL, Bordenstein SR.

Elife. 2014 Nov 25;3. doi: 10.7554/eLife.04266.


Friends with social benefits: host-microbe interactions as a driver of brain evolution and development?

Stilling RM, Bordenstein SR, Dinan TG, Cryan JF.

Front Cell Infect Microbiol. 2014 Oct 29;4:147. doi: 10.3389/fcimb.2014.00147. eCollection 2014. Review.


Genomic and cellular complexity from symbiotic simplicity.

Bordenstein SR.

Cell. 2014 Sep 11;158(6):1236-1237. doi: 10.1016/j.cell.2014.08.022.


Response to Comment on "The hologenomic basis of speciation: gut bacteria cause hybrid lethality in the genus Nasonia".

Brucker RM, Bordenstein SR.

Science. 2014 Aug 29;345(6200):1011. doi: 10.1126/science.1256708.


Recent genome reduction of Wolbachia in Drosophila recens targets phage WO and narrows candidates for reproductive parasitism.

Metcalf JA, Jo M, Bordenstein SR, Jaenike J, Bordenstein SR.

PeerJ. 2014 Aug 14;2:e529. doi: 10.7717/peerj.529. eCollection 2014.


Ankyrin domains across the Tree of Life.

Jernigan KK, Bordenstein SR.

PeerJ. 2014 Feb 6;2:e264. doi: 10.7717/peerj.264. eCollection 2014.


The capacious hologenome.

Brucker RM, Bordenstein SR.

Zoology (Jena). 2013 Oct;116(5):260-1. doi: 10.1016/j.zool.2013.08.003. Epub 2013 Aug 30.


Mom knows best: the universality of maternal microbial transmission.

Funkhouser LJ, Bordenstein SR.

PLoS Biol. 2013;11(8):e1001631. doi: 10.1371/journal.pbio.1001631. Epub 2013 Aug 20.


The hologenomic basis of speciation: gut bacteria cause hybrid lethality in the genus Nasonia.

Brucker RM, Bordenstein SR.

Science. 2013 Aug 9;341(6146):667-9. doi: 10.1126/science.1240659. Epub 2013 Jul 18.


Wolbachia: Can we save lives with a great pandemic?

LePage D, Bordenstein SR.

Trends Parasitol. 2013 Aug;29(8):385-93. doi: 10.1016/ Epub 2013 Jul 8. Review.


Comparative genomic analysis of East Asian and non-Asian Helicobacter pylori strains identifies rapidly evolving genes.

Duncan SS, Valk PL, McClain MS, Shaffer CL, Metcalf JA, Bordenstein SR, Cover TL.

PLoS One. 2013;8(1):e55120. doi: 10.1371/journal.pone.0055120. Epub 2013 Jan 31.


In vitro cultivation of the hymenoptera genetic model, Nasonia.

Brucker RM, Bordenstein SR.

PLoS One. 2012;7(12):e51269. doi: 10.1371/journal.pone.0051269. Epub 2012 Dec 5.


Insect Innate Immunity Database (IIID): an annotation tool for identifying immune genes in insect genomes.

Brucker RM, Funkhouser LJ, Setia S, Pauly R, Bordenstein SR.

PLoS One. 2012;7(9):e45125. doi: 10.1371/journal.pone.0045125. Epub 2012 Sep 12.


The complexity of virus systems: the case of endosymbionts.

Metcalf JA, Bordenstein SR.

Curr Opin Microbiol. 2012 Aug;15(4):546-52. doi: 10.1016/j.mib.2012.04.010. Epub 2012 May 19.


Speciation by symbiosis.

Brucker RM, Bordenstein SR.

Trends Ecol Evol. 2012 Aug;27(8):443-51. doi: 10.1016/j.tree.2012.03.011. Epub 2012 Apr 26. Review.


The roles of host evolutionary relationships (genus: Nasonia) and development in structuring microbial communities.

Brucker RM, Bordenstein SR.

Evolution. 2012 Feb;66(2):349-62. doi: 10.1111/j.1558-5646.2011.01454.x. Epub 2011 Oct 5.


J-Western forms of Helicobacter pylori cagA constitute a distinct phylogenetic group with a widespread geographic distribution.

Duncan SS, Valk PL, Shaffer CL, Bordenstein SR, Cover TL.

J Bacteriol. 2012 Mar;194(6):1593-604. doi: 10.1128/JB.06340-11. Epub 2012 Jan 13.

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