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Items: 1 to 50 of 596

1.

Gene Expansion and Positive Selection as Bacterial Adaptations to Oligotrophic Conditions.

Props R, Monsieurs P, Vandamme P, Leys N, Denef VJ, Boon N.

mSphere. 2019 Feb 6;4(1). pii: e00011-19. doi: 10.1128/mSphereDirect.00011-19.

2.

Metabolic and Proteomic Responses to Salinity in Synthetic Nitrifying Communities of Nitrosomonas spp. and Nitrobacter spp.

Ilgrande C, Leroy B, Wattiez R, Vlaeminck SE, Boon N, Clauwaert P.

Front Microbiol. 2018 Nov 30;9:2914. doi: 10.3389/fmicb.2018.02914. eCollection 2018.

3.

Reduced TCA cycle rates at high hydrostatic pressure hinder hydrocarbon degradation and obligate oil degraders in natural, deep-sea microbial communities.

Scoma A, Heyer R, Rifai R, Dandyk C, Marshall I, Kerckhof FM, Marietou A, Boshker HTS, Meysman FJR, Malmos KG, Vosegaard T, Vermeir P, Banat IM, Benndorf D, Boon N.

ISME J. 2018 Dec 12. doi: 10.1038/s41396-018-0324-5. [Epub ahead of print]

PMID:
30542078
4.

Combined Consumption of Beef-Based Cooked Mince and Sucrose Stimulates Oxidative Stress, Cardiac Hypertrophy, and Colonic Outgrowth of Desulfovibrionaceae in Rats.

Van Hecke T, De Vrieze J, Boon N, De Vos WH, Vossen E, De Smet S.

Mol Nutr Food Res. 2019 Jan;63(2):e1800962. doi: 10.1002/mnfr.201800962. Epub 2018 Nov 14.

PMID:
30379400
5.

Characterization of the bacterial communities on recent Icelandic volcanic deposits of different ages.

Byloos B, Monsieurs P, Mysara M, Leys N, Boon N, Van Houdt R.

BMC Microbiol. 2018 Sep 24;18(1):122. doi: 10.1186/s12866-018-1262-0.

6.

Nitrite producing bacteria inhibit reinforcement bar corrosion in cementitious materials.

Erşan YÇ, Van Tittelboom K, Boon N, De Belie N.

Sci Rep. 2018 Sep 20;8(1):14092. doi: 10.1038/s41598-018-32463-6.

7.

Temperature impact on sludge yield, settleability and kinetics of three heterotrophic conversions corroborates the prospect of thermophilic biological nitrogen removal.

Vandekerckhove TGL, De Mulder C, Boon N, Vlaeminck SE.

Bioresour Technol. 2018 Dec;269:104-112. doi: 10.1016/j.biortech.2018.08.012. Epub 2018 Aug 4.

PMID:
30153548
8.

Coronary CT Angiography and 5-Year Risk of Myocardial Infarction.

SCOT-HEART Investigators, Newby DE, Adamson PD, Berry C, Boon NA, Dweck MR, Flather M, Forbes J, Hunter A, Lewis S, MacLean S, Mills NL, Norrie J, Roditi G, Shah ASV, Timmis AD, van Beek EJR, Williams MC.

N Engl J Med. 2018 Sep 6;379(10):924-933. doi: 10.1056/NEJMoa1805971. Epub 2018 Aug 25.

PMID:
30145934
9.

Detection of microbial disturbances in a drinking water microbial community through continuous acquisition and advanced analysis of flow cytometry data.

Props R, Rubbens P, Besmer M, Buysschaert B, Sigrist J, Weilenmann H, Waegeman W, Boon N, Hammes F.

Water Res. 2018 Nov 15;145:73-82. doi: 10.1016/j.watres.2018.08.013. Epub 2018 Aug 7.

PMID:
30121434
10.

Efficient configurational-bias Monte-Carlo simulations of chain molecules with "swarms" of trial configurations.

Boon N.

J Chem Phys. 2018 Aug 14;149(6):064109. doi: 10.1063/1.5029566.

PMID:
30111122
11.

Photosynthetic oxygenation for urine nitrification.

Muys M, Coppens J, Boon N, Vlaeminck SE.

Water Sci Technol. 2018 Aug;78(1-2):183-194. doi: 10.2166/wst.2018.200.

PMID:
30101801
12.

High-resolution mapping and modeling of anammox recovery from recurrent oxygen exposure.

Seuntjens D, Carvajal-Arroyo JM, Ruopp M, Bunse P, De Mulder CP, Lochmatter S, Agrawal S, Boon N, Lackner S, Vlaeminck SE.

Water Res. 2018 Nov 1;144:522-531. doi: 10.1016/j.watres.2018.07.024. Epub 2018 Jul 11.

PMID:
30077912
13.

Decoupling Livestock from Land Use through Industrial Feed Production Pathways.

Pikaar I, Matassa S, Bodirsky BL, Weindl I, Humpenöder F, Rabaey K, Boon N, Bruschi M, Yuan Z, van Zanten H, Herrero M, Verstraete W, Popp A.

Environ Sci Technol. 2018 Jul 3;52(13):7351-7359. doi: 10.1021/acs.est.8b00216. Epub 2018 Jun 20.

PMID:
29923399
14.

Label-free Raman characterization of bacteria calls for standardized procedures.

García-Timermans C, Rubbens P, Kerckhof FM, Buysschaert B, Khalenkow D, Waegeman W, Skirtach AG, Boon N.

J Microbiol Methods. 2018 Jun 14;151:69-75. doi: 10.1016/j.mimet.2018.05.027. [Epub ahead of print]

PMID:
29909167
15.

Synergistic Exposure of Return-Sludge to Anaerobic Starvation, Sulfide, and Free Ammonia to Suppress Nitrite Oxidizing Bacteria.

Seuntjens D, Van Tendeloo M, Chatzigiannidou I, Carvajal-Arroyo JM, Vandendriessche S, Vlaeminck SE, Boon N.

Environ Sci Technol. 2018 Aug 7;52(15):8725-8732. doi: 10.1021/acs.est.7b06591. Epub 2018 Jul 16.

PMID:
29787677
16.

Usherin defects lead to early-onset retinal dysfunction in zebrafish.

Dona M, Slijkerman R, Lerner K, Broekman S, Wegner J, Howat T, Peters T, Hetterschijt L, Boon N, de Vrieze E, Sorusch N, Wolfrum U, Kremer H, Neuhauss S, Zang J, Kamermans M, Westerfield M, Phillips J, van Wijk E.

Exp Eye Res. 2018 Aug;173:148-159. doi: 10.1016/j.exer.2018.05.015. Epub 2018 May 16.

PMID:
29777677
17.

Taking the technical microbiome into the next decade.

De Vrieze J, Boon N, Verstraete W.

Environ Microbiol. 2018 May 10. doi: 10.1111/1462-2920.14269. [Epub ahead of print]

PMID:
29745026
18.

Deswelling behaviour of ionic microgel particles from low to ultra-high densities.

Nöjd S, Holmqvist P, Boon N, Obiols-Rabasa M, Mohanty PS, Schweins R, Schurtenberger P.

Soft Matter. 2018 May 23;14(20):4150-4159. doi: 10.1039/c8sm00390d.

PMID:
29744516
19.

Characterization of spoilage markers in modified atmosphere packaged iceberg lettuce.

Ioannidis AG, Kerckhof FM, Riahi Drif Y, Vanderroost M, Boon N, Ragaert P, De Meulenaer B, Devlieghere F.

Int J Food Microbiol. 2018 Aug 20;279:1-13. doi: 10.1016/j.ijfoodmicro.2018.04.034. Epub 2018 Apr 22.

PMID:
29715602
20.

Barcoding hybrids: heterogeneous distribution of Schistosoma haematobium × Schistosoma bovis hybrids across the Senegal River Basin.

Boon NAM, Van Den Broeck F, Faye D, Volckaert FAM, Mboup S, Polman K, Huyse T.

Parasitology. 2018 Apr;145(5):634-645. doi: 10.1017/S0031182018000525. Epub 2018 Apr 18.

PMID:
29667570
21.

Oral prebiotics and the influence of environmental conditions in vitro.

Slomka V, Herrero ER, Boon N, Bernaerts K, Trivedi HM, Daep C, Quirynen M, Teughels W.

J Periodontol. 2018 Jun;89(6):708-717. doi: 10.1002/JPER.17-0437.

PMID:
29577296
22.

Pinpointing wastewater and process parameters controlling the AOB to NOB activity ratio in sewage treatment plants.

Seuntjens D, Han M, Kerckhof FM, Boon N, Al-Omari A, Takacs I, Meerburg F, De Mulder C, Wett B, Bott C, Murthy S, Carvajal Arroyo JM, De Clippeleir H, Vlaeminck SE.

Water Res. 2018 Jul 1;138:37-46. doi: 10.1016/j.watres.2017.11.044. Epub 2017 Nov 23.

PMID:
29571087
23.

Clinical concentrations of peroxidases cause dysbiosis in in vitro oral biofilms.

Herrero ER, Boon N, Bernaerts K, Slomka V, Verspecht T, Quirynen M, Teughels W.

J Periodontal Res. 2018 Jun;53(3):457-466. doi: 10.1111/jre.12534. Epub 2018 Mar 8.

PMID:
29516514
24.

High-Sensitivity Cardiac Troponin I and the Diagnosis of Coronary Artery Disease in Patients With Suspected Angina Pectoris.

Adamson PD, Hunter A, Madsen DM, Shah ASV, McAllister DA, Pawade TA, Williams MC, Berry C, Boon NA, Flather M, Forbes J, McLean S, Roditi G, Timmis AD, van Beek EJR, Dweck MR, Mickley H, Mills NL, Newby DE.

Circ Cardiovasc Qual Outcomes. 2018 Feb;11(2):e004227. doi: 10.1161/CIRCOUTCOMES.117.004227.

25.

Isotope Fractionation in Biogas Allows Direct Microbial Community Stability Monitoring in Anaerobic Digestion.

De Vrieze J, De Waele M, Boeckx P, Boon N.

Environ Sci Technol. 2018 Jun 5;52(11):6704-6713. doi: 10.1021/acs.est.8b00723. Epub 2018 May 24.

PMID:
29432683
26.

Dysbiotic Biofilms Deregulate the Periodontal Inflammatory Response.

Herrero ER, Fernandes S, Verspecht T, Ugarte-Berzal E, Boon N, Proost P, Bernaerts K, Quirynen M, Teughels W.

J Dent Res. 2018 May;97(5):547-555. doi: 10.1177/0022034517752675. Epub 2018 Feb 2.

PMID:
29394879
27.

Initial evenness determines diversity and cell density dynamics in synthetic microbial ecosystems.

Ehsani E, Hernandez-Sanabria E, Kerckhof FM, Props R, Vilchez-Vargas R, Vital M, Pieper DH, Boon N.

Sci Rep. 2018 Jan 10;8(1):340. doi: 10.1038/s41598-017-18668-1.

28.

Flow cytometric fingerprinting for microbial strain discrimination and physiological characterization.

Buysschaert B, Kerckhof FM, Vandamme P, De Baets B, Boon N.

Cytometry A. 2018 Feb;93(2):201-212. doi: 10.1002/cyto.a.23302. Epub 2017 Dec 20.

29.

Microbiological, chemical and sensory spoilage analysis of raw Atlantic cod (Gadus morhua) stored under modified atmospheres.

Kuuliala L, Al Hage Y, Ioannidis AG, Sader M, Kerckhof FM, Vanderroost M, Boon N, De Baets B, De Meulenaer B, Ragaert P, Devlieghere F.

Food Microbiol. 2018 Apr;70:232-244. doi: 10.1016/j.fm.2017.10.011. Epub 2017 Oct 24.

PMID:
29173632
30.

Stripping flow cytometry: How many detectors do we need for bacterial identification?

Rubbens P, Props R, Garcia-Timermans C, Boon N, Waegeman W.

Cytometry A. 2017 Dec;91(12):1184-1191. doi: 10.1002/cyto.a.23284. Epub 2017 Nov 22.

31.

Evolutionary epidemiology of schistosomiasis: linking parasite genetics with disease phenotype in humans.

Huyse T, Boon NAM, Van den Broeck F, Mbow M, Chaturvedi A, Meurs L, Volckaert FAM, Polman K.

Int J Parasitol. 2018 Feb;48(2):107-115. doi: 10.1016/j.ijpara.2017.07.010. Epub 2017 Nov 15.

PMID:
29154994
32.

Characterization of Cefotaxime- and Ciprofloxacin-Resistant Commensal Escherichia coli Originating from Belgian Farm Animals Indicates High Antibiotic Resistance Transfer Rates.

Lambrecht E, Van Meervenne E, Boon N, Van de Wiele T, Wattiau P, Herman L, Heyndrickx M, Van Coillie E.

Microb Drug Resist. 2018 Jul/Aug;24(6):707-717. doi: 10.1089/mdr.2017.0226. Epub 2017 Nov 17.

PMID:
29148895
33.

Laboratory-Scale Simulation and Real-Time Tracking of a Microbial Contamination Event and Subsequent Shock-Chlorination in Drinking Water.

Besmer MD, Sigrist JA, Props R, Buysschaert B, Mao G, Boon N, Hammes F.

Front Microbiol. 2017 Oct 4;8:1900. doi: 10.3389/fmicb.2017.01900. eCollection 2017.

34.

Ureolytic Activity and Its Regulation in Vibrio campbellii and Vibrio harveyi in Relation to Nitrogen Recovery from Human Urine.

Defoirdt T, Vlaeminck SE, Sun X, Boon N, Clauwaert P.

Environ Sci Technol. 2017 Nov 21;51(22):13335-13343. doi: 10.1021/acs.est.7b03829. Epub 2017 Nov 9.

PMID:
29083891
35.

Flow cytometric monitoring of bacterioplankton phenotypic diversity predicts high population-specific feeding rates by invasive dreissenid mussels.

Props R, Schmidt ML, Heyse J, Vanderploeg HA, Boon N, Denef VJ.

Environ Microbiol. 2018 Feb;20(2):521-534. doi: 10.1111/1462-2920.13953. Epub 2017 Nov 3.

PMID:
29027374
36.

Kinetic exploration of intracellular nitrate storage in marine microalgae.

Decostere B, Coppens J, Vervaeren H, Vlaeminck SE, Gelder L, Boon N, Nopens I, Hulle SWHV.

J Environ Sci Health A Tox Hazard Subst Environ Eng. 2017 Dec 6;52(14):1303-1311. doi: 10.1080/10934529.2017.1364921. Epub 2017 Sep 26.

PMID:
28949865
37.

Butyrate-producing bacteria supplemented in vitro to Crohn's disease patient microbiota increased butyrate production and enhanced intestinal epithelial barrier integrity.

Geirnaert A, Calatayud M, Grootaert C, Laukens D, Devriese S, Smagghe G, De Vos M, Boon N, Van de Wiele T.

Sci Rep. 2017 Sep 13;7(1):11450. doi: 10.1038/s41598-017-11734-8.

38.

Diagnostic and prognostic benefits of computed tomography coronary angiography using the 2016 National Institute for Health and Care Excellence guidance within a randomised trial.

Adamson PD, Hunter A, Williams MC, Shah ASV, McAllister DA, Pawade TA, Dweck MR, Mills NL, Berry C, Boon NA, Clark E, Flather M, Forbes J, McLean S, Roditi G, van Beek EJR, Timmis AD, Newby DE.

Heart. 2018 Feb;104(3):207-214. doi: 10.1136/heartjnl-2017-311508. Epub 2017 Aug 27.

39.

Development of a reliable experimental set-up for Dover sole larvae Solea solea L. and exploring the possibility of implementing this housing system in a gnotobiotic model.

De Swaef E, Demeestere K, Boon N, Van den Broeck W, Haesebrouck F, Decostere A.

Res Vet Sci. 2017 Dec;115:418-424. doi: 10.1016/j.rvsc.2017.07.025. Epub 2017 Jul 24.

PMID:
28756344
40.

In vitro Increased Respiratory Activity of Selected Oral Bacteria May Explain Competitive and Collaborative Interactions in the Oral Microbiome.

Hernandez-Sanabria E, Slomka V, Herrero ER, Kerckhof FM, Zaidel L, Teughels W, Boon N.

Front Cell Infect Microbiol. 2017 Jun 7;7:235. doi: 10.3389/fcimb.2017.00235. eCollection 2017.

41.

Swelling of micro-hydrogels with a crosslinker gradient.

Boon N, Schurtenberger P.

Phys Chem Chem Phys. 2017 Sep 13;19(35):23740-23746. doi: 10.1039/c7cp02434g.

42.

Self-healing capacity of deep-sea ecosystems affected by petroleum hydrocarbons: Understanding microbial oil degradation at hydrocarbon seeps is key to sustainable bioremediation protocols.

Scoma A, Yakimov MM, Daffonchio D, Boon N.

EMBO Rep. 2017 Jun;18(6):868-872. doi: 10.15252/embr.201744090. Epub 2017 May 17. No abstract available.

43.

Biotechnologies for Marine Oil Spill Cleanup: Indissoluble Ties with Microorganisms.

Mapelli F, Scoma A, Michoud G, Aulenta F, Boon N, Borin S, Kalogerakis N, Daffonchio D.

Trends Biotechnol. 2017 Sep;35(9):860-870. doi: 10.1016/j.tibtech.2017.04.003. Epub 2017 May 13. Review.

44.

The Impact of Space Flight on Survival and Interaction of Cupriavidus metallidurans CH34 with Basalt, a Volcanic Moon Analog Rock.

Byloos B, Coninx I, Van Hoey O, Cockell C, Nicholson N, Ilyin V, Van Houdt R, Boon N, Leys N.

Front Microbiol. 2017 Apr 28;8:671. doi: 10.3389/fmicb.2017.00671. eCollection 2017.

45.

Necrotrophic growth of periodontopathogens is a novel virulence factor in oral biofilms.

Rodriguez Herrero E, Boon N, Pauwels M, Bernaerts K, Slomka V, Quirynen M, Teughels W.

Sci Rep. 2017 Apr 24;7(1):1107. doi: 10.1038/s41598-017-01239-9.

46.

Contrasting dual (C, Cl) isotope fractionation offers potential to distinguish reductive chloroethene transformation from breakdown by permanganate.

Doğan-Subaşı E, Elsner M, Qiu S, Cretnik S, Atashgahi S, Shouakar-Stash O, Boon N, Dejonghe W, Bastiaens L.

Sci Total Environ. 2017 Oct 15;596-597:169-177. doi: 10.1016/j.scitotenv.2017.03.292. Epub 2017 Apr 18.

PMID:
28431360
47.

Identification of long non-coding RNAs that stimulate cell survival in bladder cancer.

Dudek AM, Boer SJ, Boon N, Witjes JA, Kiemeney LALM, Verhaegh GW.

Oncotarget. 2017 May 23;8(21):34442-34452. doi: 10.18632/oncotarget.16284.

48.

Microalgal bacterial flocs treating paper mill effluent: A sunlight-based approach for removing carbon, nitrogen, phosphorus, and calcium.

Van Den Hende S, Rodrigues A, Hamaekers H, Sonnenholzner S, Vervaeren H, Boon N.

N Biotechnol. 2017 Oct 25;39(Pt A):1-10. doi: 10.1016/j.nbt.2017.03.004. Epub 2017 Apr 4.

PMID:
28385669
49.

Bacillus sphaericus LMG 22257 is physiologically suitable for self-healing concrete.

Wang J, Jonkers HM, Boon N, De Belie N.

Appl Microbiol Biotechnol. 2017 Jun;101(12):5101-5114. doi: 10.1007/s00253-017-8260-2. Epub 2017 Apr 1.

PMID:
28365797
50.

Reconciliation between operational taxonomic units and species boundaries.

Mysara M, Vandamme P, Props R, Kerckhof FM, Leys N, Boon N, Raes J, Monsieurs P.

FEMS Microbiol Ecol. 2017 Apr 1;93(4). doi: 10.1093/femsec/fix029.

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