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Items: 1 to 50 of 202

1.

Comparison of reprogramming factor targets reveals both species-specific and conserved mechanisms in early iPSC reprogramming.

Fu K, Chronis C, Soufi A, Bonora G, Edwards M, Smale ST, Zaret KS, Plath K, Pellegrini M.

BMC Genomics. 2018 Dec 22;19(1):956. doi: 10.1186/s12864-018-5326-1.

2.

X-Chromosome Inactivation and Escape from X Inactivation in Mouse.

Ma W, Bonora G, Berletch JB, Deng X, Noble WS, Disteche CM.

Methods Mol Biol. 2018;1861:205-219. doi: 10.1007/978-1-4939-8766-5_15.

3.

Counteracting Postural Perturbations Through Body Weight Shift: a Pilot Study Using a Robotic Platform in Subjects with Parkinson's Disease.

Carpinella I, Nardone A, Bonora G, Bowman T, Cattaneo D, Rabuffetti M, Ferrarin M.

IEEE Trans Neural Syst Rehabil Eng. 2018 Aug 2. doi: 10.1109/TNSRE.2018.2862463. [Epub ahead of print]

PMID:
30072335
4.

Computational methods for analyzing and modeling genome structure and organization.

Lin D, Bonora G, Yardımcı GG, Noble WS.

Wiley Interdiscip Rev Syst Biol Med. 2019 Jan;11(1):e1435. doi: 10.1002/wsbm.1435. Epub 2018 Jul 18. Review.

PMID:
30022617
5.

X Chromosome Dosage Influences DNA Methylation Dynamics during Reprogramming to Mouse iPSCs.

Pasque V, Karnik R, Chronis C, Petrella P, Langerman J, Bonora G, Song J, Vanheer L, Sadhu Dimashkie A, Meissner A, Plath K.

Stem Cell Reports. 2018 May 8;10(5):1537-1550. doi: 10.1016/j.stemcr.2018.03.019. Epub 2018 Apr 19.

6.

Orientation-dependent Dxz4 contacts shape the 3D structure of the inactive X chromosome.

Bonora G, Deng X, Fang H, Ramani V, Qiu R, Berletch JB, Filippova GN, Duan Z, Shendure J, Noble WS, Disteche CM.

Nat Commun. 2018 Apr 13;9(1):1445. doi: 10.1038/s41467-018-03694-y.

7.

Structural aspects of the inactive X chromosome.

Bonora G, Disteche CM.

Philos Trans R Soc Lond B Biol Sci. 2017 Nov 5;372(1733). pii: 20160357. doi: 10.1098/rstb.2016.0357. Review.

8.

Correction: In vivo targeting of de novo DNA methylation by histone modifications in yeast and mouse.

Morselli M, Pastor WA, Montanini B, Nee K, Ferrari R, Fu K, Bonora G, Rubbi L, Clark AT, Ottonello S, Jacobsen SE, Pellegrini M.

Elife. 2017 Aug 31;6. pii: e30948. doi: 10.7554/eLife.30948. No abstract available.

9.

Investigation of Anticipatory Postural Adjustments during One-Leg Stance Using Inertial Sensors: Evidence from Subjects with Parkinsonism.

Bonora G, Mancini M, Carpinella I, Chiari L, Ferrarin M, Nutt JG, Horak FB.

Front Neurol. 2017 Jul 25;8:361. doi: 10.3389/fneur.2017.00361. eCollection 2017.

10.

Cooperative Binding of Transcription Factors Orchestrates Reprogramming.

Chronis C, Fiziev P, Papp B, Butz S, Bonora G, Sabri S, Ernst J, Plath K.

Cell. 2017 Jan 26;168(3):442-459.e20. doi: 10.1016/j.cell.2016.12.016. Epub 2017 Jan 19.

11.

Human Naive Pluripotent Stem Cells Model X Chromosome Dampening and X Inactivation.

Sahakyan A, Kim R, Chronis C, Sabri S, Bonora G, Theunissen TW, Kuoy E, Langerman J, Clark AT, Jaenisch R, Plath K.

Cell Stem Cell. 2017 Jan 5;20(1):87-101. doi: 10.1016/j.stem.2016.10.006. Epub 2016 Dec 15.

12.

Human Embryonic Stem Cells Do Not Change Their X Inactivation Status during Differentiation.

Patel S, Bonora G, Sahakyan A, Kim R, Chronis C, Langerman J, Fitz-Gibbon S, Rubbi L, Skelton RJP, Ardehali R, Pellegrini M, Lowry WE, Clark AT, Plath K.

Cell Rep. 2017 Jan 3;18(1):54-67. doi: 10.1016/j.celrep.2016.11.054. Epub 2016 Dec 16.

13.

Wearable Sensor-Based Biofeedback Training for Balance and Gait in Parkinson Disease: A Pilot Randomized Controlled Trial.

Carpinella I, Cattaneo D, Bonora G, Bowman T, Martina L, Montesano A, Ferrarin M.

Arch Phys Med Rehabil. 2017 Apr;98(4):622-630.e3. doi: 10.1016/j.apmr.2016.11.003. Epub 2016 Dec 10.

PMID:
27965005
14.

Gait initiation is impaired in subjects with Parkinson's disease in the OFF state: Evidence from the analysis of the anticipatory postural adjustments through wearable inertial sensors.

Bonora G, Mancini M, Carpinella I, Chiari L, Horak FB, Ferrarin M.

Gait Posture. 2017 Jan;51:218-221. doi: 10.1016/j.gaitpost.2016.10.017. Epub 2016 Oct 31.

15.

Novel features of telomere biology revealed by the absence of telomeric DNA methylation.

Vega-Vaquero A, Bonora G, Morselli M, Vaquero-Sedas MI, Rubbi L, Pellegrini M, Vega-Palas MA.

Genome Res. 2016 Aug;26(8):1047-56. doi: 10.1101/gr.202465.115. Epub 2016 Jul 12.

16.

A high-throughput screen of inactive X chromosome reactivation identifies the enhancement of DNA demethylation by 5-aza-2'-dC upon inhibition of ribonucleotide reductase.

Minkovsky A, Sahakyan A, Bonora G, Damoiseaux R, Dimitrova E, Rubbi L, Pellegrini M, Radu CG, Plath K.

Epigenetics Chromatin. 2015 Oct 13;8:42. doi: 10.1186/s13072-015-0034-4. eCollection 2015.

17.

A new instrumented method for the evaluation of gait initiation and step climbing based on inertial sensors: a pilot application in Parkinson's disease.

Bonora G, Carpinella I, Cattaneo D, Chiari L, Ferrarin M.

J Neuroeng Rehabil. 2015 May 5;12:45. doi: 10.1186/s12984-015-0038-0.

18.

In vivo targeting of de novo DNA methylation by histone modifications in yeast and mouse.

Morselli M, Pastor WA, Montanini B, Nee K, Ferrari R, Fu K, Bonora G, Rubbi L, Clark AT, Ottonello S, Jacobsen SE, Pellegrini M.

Elife. 2015 Apr 7;4:e06205. doi: 10.7554/eLife.06205. Erratum in: Elife. 2017 Aug 31;6:.

19.

A Genome-Wide Chronological Study of Gene Expression and Two Histone Modifications, H3K4me3 and H3K9ac, during Developmental Leaf Senescence.

Brusslan JA, Bonora G, Rus-Canterbury AM, Tariq F, Jaroszewicz A, Pellegrini M.

Plant Physiol. 2015 Aug;168(4):1246-61. doi: 10.1104/pp.114.252999. Epub 2015 Mar 23.

20.

X chromosome reactivation dynamics reveal stages of reprogramming to pluripotency.

Pasque V, Tchieu J, Karnik R, Uyeda M, Sadhu Dimashkie A, Case D, Papp B, Bonora G, Patel S, Ho R, Schmidt R, McKee R, Sado T, Tada T, Meissner A, Plath K.

Cell. 2014 Dec 18;159(7):1681-97. doi: 10.1016/j.cell.2014.11.040.

21.

The Mbd1-Atf7ip-Setdb1 pathway contributes to the maintenance of X chromosome inactivation.

Minkovsky A, Sahakyan A, Rankin-Gee E, Bonora G, Patel S, Plath K.

Epigenetics Chromatin. 2014 Jun 26;7:12. doi: 10.1186/1756-8935-7-12. eCollection 2014.

22.

A mechanistic link between gene regulation and genome architecture in mammalian development.

Bonora G, Plath K, Denholtz M.

Curr Opin Genet Dev. 2014 Aug;27:92-101. doi: 10.1016/j.gde.2014.05.002. Epub 2014 Jul 5. Review.

23.

Long-range chromatin contacts in embryonic stem cells reveal a role for pluripotency factors and polycomb proteins in genome organization.

Denholtz M, Bonora G, Chronis C, Splinter E, de Laat W, Ernst J, Pellegrini M, Plath K.

Cell Stem Cell. 2013 Nov 7;13(5):602-16. doi: 10.1016/j.stem.2013.08.013. Epub 2013 Sep 12.

24.

Proteomic and genomic approaches reveal critical functions of H3K9 methylation and heterochromatin protein-1γ in reprogramming to pluripotency.

Sridharan R, Gonzales-Cope M, Chronis C, Bonora G, McKee R, Huang C, Patel S, Lopez D, Mishra N, Pellegrini M, Carey M, Garcia BA, Plath K.

Nat Cell Biol. 2013 Jul;15(7):872-82. doi: 10.1038/ncb2768. Epub 2013 Jun 9.

25.

Pharmacokinetic analysis of multi PEG-theophylline conjugates.

Grassi M, Bonora GM, Drioli S, Cateni F, Zacchigna M.

Comput Biol Chem. 2012 Oct;40:7-14. doi: 10.1016/j.compbiolchem.2012.07.002. Epub 2012 Jul 20.

PMID:
22922451
26.

Reorganization of the host epigenome by a viral oncogene.

Ferrari R, Su T, Li B, Bonora G, Oberai A, Chan Y, Sasidharan R, Berk AJ, Pellegrini M, Kurdistani SK.

Genome Res. 2012 Jul;22(7):1212-21. doi: 10.1101/gr.132308.111. Epub 2012 Apr 12.

27.

Mediator coordinates PIC assembly with recruitment of CHD1.

Lin JJ, Lehmann LW, Bonora G, Sridharan R, Vashisht AA, Tran N, Plath K, Wohlschlegel JA, Carey M.

Genes Dev. 2011 Oct 15;25(20):2198-209. doi: 10.1101/gad.17554711. Epub 2011 Oct 6.

28.

Diarrhea in children: etiology and clinical aspects.

Palumbo E, Branchi M, Malorgio C, Siani A, Bonora G.

Minerva Pediatr. 2010 Aug;62(4):347-51.

PMID:
20940668
29.

Conjugated PDT drug: photosensitizing activity and tissue distribution of PEGylated pheophorbide a.

Rapozzi V, Zacchigna M, Biffi S, Garrovo C, Cateni F, Stebel M, Zorzet S, Bonora GM, Drioli S, Xodo LE.

Cancer Biol Ther. 2010 Sep 1;10(5):471-82. Epub 2010 Oct 1.

PMID:
20592494
30.

Diarrhoea in children: aetiology and clinical aspects.

Palumbo E, Malorgio C, Siani A, Bonora G.

Infez Med. 2009 Jun;17(2):95-9.

31.

Recent advances on patents in poly(ethylene glycol)-based drug delivery.

Bonora GM, Drioli S.

Recent Pat Drug Deliv Formul. 2008;2(2):189-95. Review.

PMID:
19075907
32.

[Mycoplasma pneumoniae encephalitis in immunocompetent child].

Palumbo E, Malorgio C, Nasca G, Siani A, Branchi M, Bonora G.

Recenti Prog Med. 2008 Jun;99(6):306-8. Italian.

PMID:
18710062
33.

Large-scale preparation of conjugated oligonucleoside phosphorothioates by the high-efficiency liquid-phase (HELP) method.

Bonora GM.

Curr Protoc Nucleic Acid Chem. 2005 Oct;Chapter 4:Unit 4.27. doi: 10.1002/0471142700.nc0427s22.

PMID:
18428942
34.

PNA conjugated to high-molecular weight poly(ethylene glycol): synthesis and properties.

Bonora GM, Drioli S, Ballico M, Faccini A, Corradini R, Cogoi S, Xodo L.

Nucleosides Nucleotides Nucleic Acids. 2007;26(6-7):661-4.

PMID:
18066875
35.

New MultiPEG-conjugated theophylline derivatives: synthesis and pharmacological evaluations.

Zacchigna M, Di Luca G, Cateni F, Maurich V, Ballico M, Bonora GM, Drioli S.

Eur J Pharm Sci. 2007 Mar;30(3-4):343-50. Epub 2006 Dec 14.

PMID:
17240123
36.
37.

Synthesis of oligonucleotide-peptide PEG-conjugated: the EGG (oligonucleotide)-chicken (peptide) dilemma?

Bonora GM, Ballico M, Campaner P, Drioli S, Adamo I.

Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):1255-7.

PMID:
14565393
38.
40.

Antigene effect in K562 cells of a PEG-conjugated triplex-forming oligonucleotide targeted to the bcr/abl oncogene.

Rapozzi V, Cogoi S, Spessotto P, Risso A, Bonora GM, Quadrifoglio F, Xodo LE.

Biochemistry. 2002 Jan 15;41(2):502-10.

PMID:
11781088
41.

[Cleavage of RNA in hybrid duplexes by E. coli ribonuclease H. II. Substrate properties of nucleotides containing non-nucleotide linkers].

Vorob'ev PE, Pyshnaia IA, Pyshnyĭ DV, Repkova MN, Ven'iaminov AG, Zenkova MA, Ivanova EM, Scalfi-Happ C, Seliger H, Bonora G, Zarytova VF.

Bioorg Khim. 2000 Nov;26(11):844-51. Russian.

PMID:
11696895
43.

Nuclease resistance and RNase H sensitivity of oligonucleotides bridged by oligomethylenediol and oligoethylene glycol linkers.

Vorobjev PE, Pyshnaya IA, Pyshnyi DV, Venyaminova AG, Ivanova EM, Zarytova VF, Bonora GM, Scalfi-Happ C, Seliger H.

Antisense Nucleic Acid Drug Dev. 2001 Apr;11(2):77-85.

PMID:
11334143
44.

PAcM-AN: poly (N-acryloylmorpholine)-conjugated antisense oligonucleotides.

Bonora GM, De Franco AM, Rossin R, Veronese FM, Ferruti P, Plyasunova O, Vorobjev PE, Pyshnyi DV, Komarova NI, Zarytova VF.

Nucleosides Nucleotides Nucleic Acids. 2000 Aug;19(8):1281-8.

PMID:
11097058
45.

Conformational restriction through C alpha i <--> C alpha i cyclization: Ac12c, the largest cycloaliphatic C alpha,alpha- disubstituted glycine known.

Saviano M, Iacovino R, Menchise V, Benedetti E, Bonora GM, Gatos M, Graci L, Formaggio F, Crisma M, Toniolo C.

Biopolymers. 2000 Feb;53(2):200-12.

PMID:
10679624
46.

Oligonucleotide conjugated to linear and branched high molecular weight polyethylene glycol as substrates for RNase H.

Vorobjev PE, Zarytova VF, Bonora GM.

Nucleosides Nucleotides. 1999 Nov-Dec;18(11-12):2745-50.

PMID:
10639755
47.

Antisense activity of an anti-HIV oligonucleotide conjugated to linear and branched high molecular weight polyethylene glycols.

Bonora GM, Tocco G, Zaramella S, Veronese FM, Pliasunova O, Pokrovsky A, Ivanova E, Zarytova V.

Farmaco. 1998 Oct-Nov;53(10-11):634-7.

PMID:
10205850
48.

[Ceftriaxone-induced cholelithiasis].

Maccherini M, Borlini G, Branchi M, Barbonetti C, Moretti P, Bonora G.

Pediatr Med Chir. 1998 Sep-Oct;20(5):341-3. Italian.

PMID:
10068984
49.

Synthesis and characterization of high-molecular mass polyethylene glycol-conjugated oligonucleotides.

Bonora GM, Ivanova E, Zarytova V, Burcovich B, Veronese FM.

Bioconjug Chem. 1997 Nov-Dec;8(6):793-7.

PMID:
9404651
50.

Conformational characterization of peptides rich in the cycloaliphatic C alpha,alpha-disubstituted glycine 1-aminocyclononane-1-carboxylic acid.

Gatos M, Formaggio F, Crisma M, Valle G, Toniolo C, Bonora GM, Saviano M, Iacovino R, Menchise V, Galdiero S, Pedone C, Benedetti E.

J Pept Sci. 1997 Sep-Oct;3(5):367-82.

PMID:
9391912

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