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Items: 1 to 50 of 107

1.

Occurrence of Escherichia coli O157:H7 in Pest Flies Captured in Leafy Greens Plots Grown Near a Beef Cattle Feedlot.

Berry ED, Wells JE, Durso LM, Friesen KM, Bono JL, Suslow TV.

J Food Prot. 2019 Aug;82(8):1300-1307. doi: 10.4315/0362-028X.JFP-18-601.

PMID:
31310171
2.

Closed Genome Sequence of Escherichia coli K-12 Group Strain C600.

Allué-Guardia A, Nyong EC, Koenig SSK, Vargas SM, Bono JL, Eppinger M.

Microbiol Resour Announc. 2019 Jan 10;8(2). pii: e01052-18. doi: 10.1128/MRA.01052-18. eCollection 2019 Jan.

3.

Complete Genome Sequences of Three Shiga Toxin-Producing Escherichia coli O111:H8 Strains Exhibiting an Aggregation Phenotype.

Parker CT, Huynh S, Bono JL, Miller WG, Cooley MB, Brandl MT.

Microbiol Resour Announc. 2019 Jan 3;8(1). pii: e01335-18. doi: 10.1128/MRA.01335-18. eCollection 2019 Jan.

4.

Complete Genome Sequences of the Arcobacter cryaerophilus Strains ATCC 43158T and ATCC 49615.

Miller WG, Yee E, Bono JL.

Microbiol Resour Announc. 2018 Nov 21;7(20). pii: e01463-18. doi: 10.1128/MRA.01463-18. eCollection 2018 Nov.

5.

Complete Genome Sequence of the Arcobacter suis Type Strain LMG 26152.

Miller WG, Yee E, Bono JL.

Microbiol Resour Announc. 2018 Nov 1;7(17). pii: e01307-18. doi: 10.1128/MRA.01307-18. eCollection 2018 Nov.

6.

Complete Genome Sequence of the Arcobacter ellisii Type Strain LMG 26155.

Miller WG, Yee E, Bono JL.

Microbiol Resour Announc. 2018 Oct 25;7(16). pii: e01268-18. doi: 10.1128/MRA.01268-18. eCollection 2018 Oct.

7.

Complete Genome Sequence of the Arcobacter molluscorum Type Strain LMG 25693.

Miller WG, Yee E, Bono JL.

Microbiol Resour Announc. 2018 Oct 25;7(16). pii: e01293-18. doi: 10.1128/MRA.01293-18. eCollection 2018 Oct.

8.

Complete Genome Sequence of the Arcobacter halophilus Type Strain CCUG 53805.

Miller WG, Yee E, Bono JL.

Microbiol Resour Announc. 2018 Oct 11;7(14). pii: e01077-18. doi: 10.1128/MRA.01077-18. eCollection 2018 Oct.

9.

Complete Genome Sequence of the Arcobacter bivalviorum Type Strain LMG 26154.

Miller WG, Yee E, Bono JL.

Microbiol Resour Announc. 2018 Sep 27;7(12). pii: e01076-18. doi: 10.1128/MRA.01076-18. eCollection 2018 Sep.

10.

Complete Genome Sequence of the Arcobacter mytili Type Strain LMG 24559.

Miller WG, Yee E, Bono JL.

Microbiol Resour Announc. 2018 Sep 20;7(11). pii: e01078-18. doi: 10.1128/MRA.01078-18. eCollection 2018 Sep.

11.

Closed Genome Sequences and Antibiograms of 16 Pasteurella multocida Isolates from Bovine Respiratory Disease Complex Cases and Apparently Healthy Controls.

Harhay GP, Harhay DM, Bono JL, Smith TPL, Capik SF, DeDonder KD, Apley MD, Lubbers BV, White BJ, Larson RL.

Microbiol Resour Announc. 2018 Sep 20;7(11). pii: e00976-18. doi: 10.1128/MRA.00976-18. eCollection 2018 Sep.

12.

Draft Genome Sequences of Seven Strains of Shiga Toxin-Producing Escherichia coli O111 with Variation in Their Sensitivity to Novobiocin.

Rotundo L, Boccia F, Fratamico PM, Xu A, Sommers CH, Liu Y, Bono JL, Pepe T.

Microbiol Resour Announc. 2018 Sep 13;7(10). pii: e01030-18. doi: 10.1128/MRA.01030-18. eCollection 2018 Sep.

13.

Genome Sequences of Eight Shiga Toxin-Producing Escherichia coli Strains Isolated from a Produce-Growing Region in California.

Parker CT, Cooper KK, Huynh S, Smith TP, Bono JL, Cooley M.

Microbiol Resour Announc. 2018 Jul 12;7(1). pii: e00807-18. doi: 10.1128/MRA.00807-18. eCollection 2018 Jul.

14.

Phylogeographic analysis reveals multiple international transmission events have driven the global emergence of Escherichia coli O157:H7.

Franz E, Rotariu O, Lopes BS, MacRae M, Bono JL, Laing C, Gannon V, Söderlund R, van Hoek AHAM, Friesema I, French NP, George T, Biggs PJ, Jaros P, Rivas M, Chinen I, Campos J, Jernberg C, Gobius K, Mellor GE, Chandry PS, Perez-Reche F, Forbes KJ, Strachan NJC.

Clin Infect Dis. 2018 Oct 29. doi: 10.1093/cid/ciy919. [Epub ahead of print]

PMID:
30371758
15.

Closed Genome and Comparative Phylogenetic Analysis of the Clinical Multidrug Resistant Shigella sonnei Strain 866.

Allué-Guardia A, Koenig SSK, Quirós P, Muniesa M, Bono JL, Eppinger M.

Genome Biol Evol. 2018 Sep 1;10(9):2241-2247. doi: 10.1093/gbe/evy168.

16.

Comparative genomics of Salmonella enterica serovar Montevideo reveals lineage-specific gene differences that may influence ecological niche association.

Nguyen SV, Harhay DM, Bono JL, Smith TPL, Fields PI, Dinsmore BA, Santovenia M, Wang R, Bosilevac JM, Harhay GP.

Microb Genom. 2018 Aug;4(8). doi: 10.1099/mgen.0.000202. Epub 2018 Jul 27.

17.

Complete Genome Sequence of the Hippuricase-Positive Campylobacter avium Type Strain LMG 24591.

Miller WG, Chapman MH, Yee E, Revez J, Bono JL, Rossi M.

Genome Announc. 2017 Oct 26;5(43). pii: e01221-17. doi: 10.1128/genomeA.01221-17.

18.

Closed Genome Sequences of Seven Histophilus somni Isolates from Beef Calves with Bovine Respiratory Disease Complex.

Harhay GP, Harhay DM, Bono JL, Smith TPL, Capik SF, DeDonder KD, Apley MD, Lubbers BV, White BJ, Larson RL.

Genome Announc. 2017 Oct 5;5(40). pii: e01099-17. doi: 10.1128/genomeA.01099-17.

19.

Comparative Genomic Analysis Identifies a Campylobacter Clade Deficient in Selenium Metabolism.

Miller WG, Yee E, Lopes BS, Chapman MH, Huynh S, Bono JL, Parker CT, Strachan NJC, Forbes KJ.

Genome Biol Evol. 2017 Jul 1;9(7):1843-1858. doi: 10.1093/gbe/evx093.

20.

The effects of monensin in diets fed to finishing beef steers and heifers on growth performance and fecal shedding of Escherichia coli O157:H7.

Hales KE, Wells JE, Berry ED, Kalchayanand N, Bono JL, Kim M.

J Anim Sci. 2017 Aug;95(8):3738-3744. doi: 10.2527/jas.2017.1528.

PMID:
28805884
21.

The impact of the bovine faecal microbiome on Escherichia coli O157:H7 prevalence and enumeration in naturally infected cattle.

Kim M, Kuehn LA, Bono JL, Berry ED, Kalchayanand N, Freetly HC, Benson AK, Wells JE.

J Appl Microbiol. 2017 Oct;123(4):1027-1042. doi: 10.1111/jam.13545. Epub 2017 Sep 11.

PMID:
28736954
22.

Comparative Genomics of All Three Campylobacter sputorum Biovars and a Novel Cattle-Associated C. sputorum Clade.

Miller WG, Yee E, Chapman MH, Bono JL.

Genome Biol Evol. 2017 Jun 1;9(6):1513-1518. doi: 10.1093/gbe/evx112.

23.

Complete Genome Sequence of the Campylobacter cuniculorum Type Strain LMG 24588.

Miller WG, Yee E, Revez J, Bono JL, Rossi M.

Genome Announc. 2017 Jun 15;5(24). pii: e00543-17. doi: 10.1128/genomeA.00543-17.

24.

Complete Genome Sequence of the Campylobacter helveticus Type Strain ATCC 51209.

Miller WG, Yee E, Bono JL.

Genome Announc. 2017 May 25;5(21). pii: e00398-17. doi: 10.1128/genomeA.00398-17.

25.

Short-term evolution of Shiga toxin-producing Escherichia coli O157:H7 between two food-borne outbreaks.

Cowley LA, Dallman TJ, Fitzgerald S, Irvine N, Rooney PJ, McAteer SP, Day M, Perry NT, Bono JL, Jenkins C, Gally DL.

Microb Genom. 2016 Sep 8;2(9):e000084. doi: 10.1099/mgen.0.000084. eCollection 2016 Sep.

26.

Evolution of a zoonotic pathogen: investigating prophage diversity in enterohaemorrhagic Escherichia coli O157 by long-read sequencing.

Shaaban S, Cowley LA, McAteer SP, Jenkins C, Dallman TJ, Bono JL, Gally DL.

Microb Genom. 2016 Dec 12;2(12):e000096. doi: 10.1099/mgen.0.000096. eCollection 2016 Dec.

27.

Genome Sequence of the Thermotolerant Foodborne Pathogen Salmonella enterica Serovar Senftenberg ATCC 43845 and Phylogenetic Analysis of Loci Encoding Increased Protein Quality Control Mechanisms.

Nguyen SV, Harhay GP, Bono JL, Smith TP, Harhay DM.

mSystems. 2017 Feb 28;2(1). pii: e00190-16. doi: 10.1128/mSystems.00190-16. eCollection 2017 Jan-Feb.

28.

Genomic signatures of Mannheimia haemolytica that associate with the lungs of cattle with respiratory disease, an integrative conjugative element, and antibiotic resistance genes.

Clawson ML, Murray RW, Sweeney MT, Apley MD, DeDonder KD, Capik SF, Larson RL, Lubbers BV, White BJ, Kalbfleisch TS, Schuller G, Dickey AM, Harhay GP, Heaton MP, Chitko-McKown CG, Brichta-Harhay DM, Bono JL, Smith TP.

BMC Genomics. 2016 Nov 29;17(1):982.

29.

Complete Genome Sequence of a Colistin Resistance Gene (mcr-1)-Bearing Isolate of Escherichia coli from the United States.

Meinersmann RJ, Ladely SR, Bono JL, Plumblee JR, Hall MC, Genzlinger LL, Cook KL.

Genome Announc. 2016 Nov 10;4(6). pii: e01283-16. doi: 10.1128/genomeA.01283-16.

30.

Complete, Closed Genome Sequences of 10 Salmonella enterica subsp. enterica Serovar Typhimurium Strains Isolated from Human and Bovine Sources.

Nguyen SV, Harhay DM, Bono JL, Smith TP, Fields PI, Dinsmore BA, Santovenia M, Kelley CM, Wang R, Bosilevac JM, Harhay GP.

Genome Announc. 2016 Nov 3;4(6). pii: e01212-16. doi: 10.1128/genomeA.01212-16.

31.

Support vector machine applied to predict the zoonotic potential of E. coli O157 cattle isolates.

Lupolova N, Dallman TJ, Matthews L, Bono JL, Gally DL.

Proc Natl Acad Sci U S A. 2016 Oct 4;113(40):11312-11317. Epub 2016 Sep 19.

32.

Disinfectant and Antimicrobial Susceptibility Profiles of the Big Six Non-O157 Shiga Toxin-Producing Escherichia coli Strains from Food Animals and Humans.

Beier RC, Franz E, Bono JL, Mandrell RE, Fratamico PM, Callaway TR, Andrews K, Poole TL, Crippen TL, Sheffield CL, Anderson RC, Nisbet DJ.

J Food Prot. 2016 Aug;79(8):1355-70. doi: 10.4315/0362-028X.JFP-15-600.

PMID:
27497123
33.

Complete and Closed Genome Sequences of 10 Salmonella enterica subsp. enterica Serovar Anatum Isolates from Human and Bovine Sources.

Nguyen SV, Harhay DM, Bono JL, Smith TP, Fields PI, Dinsmore BA, Santovenia M, Kelley CM, Wang R, Bosilevac JM, Harhay GP.

Genome Announc. 2016 Jun 2;4(3). pii: e00447-16. doi: 10.1128/genomeA.00447-16.

34.

Complete Genome Sequence of UV-Resistant Campylobacter jejuni RM3194, Including an 81.08-Kilobase Plasmid.

Gunther NW 4th, Reichenberger ER, Bono JL.

Genome Announc. 2016 Apr 28;4(2). pii: e00305-16. doi: 10.1128/genomeA.00305-16.

35.

Large genomic differences between Moraxella bovoculi isolates acquired from the eyes of cattle with infectious bovine keratoconjunctivitis versus the deep nasopharynx of asymptomatic cattle.

Dickey AM, Loy JD, Bono JL, Smith TP, Apley MD, Lubbers BV, DeDonder KD, Capik SF, Larson RL, White BJ, Blom J, Chitko-McKown CG, Clawson ML.

Vet Res. 2016 Feb 13;47:31. doi: 10.1186/s13567-016-0316-2.

36.

Complete Closed Genome Sequences of Salmonella enterica subsp. enterica Serotypes Anatum, Montevideo, Typhimurium, and Newport, Isolated from Beef, Cattle, and Humans.

Harhay DM, Bono JL, Smith TP, Fields PI, Dinsmore BA, Santovenia M, Kelley CM, Wang R, Harhay GP.

Genome Announc. 2016 Feb 4;4(1). pii: e01683-15. doi: 10.1128/genomeA.01683-15.

37.

Complete Genome Sequence of Campylobacter jejuni RM1285, a Rod-Shaped Morphological Variant.

Gunther NW 4th, Bono JL, Needleman DS.

Genome Announc. 2015 Nov 25;3(6). pii: e01361-15. doi: 10.1128/genomeA.01361-15.

38.

Complete Genome Sequence of the Campylobacter ureolyticus Clinical Isolate RIGS 9880.

Miller WG, Yee E, On SL, Andersen LP, Bono JL.

Genome Announc. 2015 Nov 5;3(6). pii: e01291-15. doi: 10.1128/genomeA.01291-15.

39.

Genome Sequence of a Urease-Positive Campylobacter lari Strain.

Meinersmann RJ, Bono JL, Lindsey RL, Genzlinger LL, Loparev VN, Oakley BB.

Genome Announc. 2015 Oct 15;3(5). pii: e01191-15. doi: 10.1128/genomeA.01191-15.

40.

Sequence of Colonization Determines the Composition of Mixed Biofilms by Escherichia coli O157:H7 and O111:H8 Strains.

Wang R, Kalchayanand N, Bono JL.

J Food Prot. 2015 Aug;78(8):1554-9. doi: 10.4315/0362-028X.JFP-15-009.

PMID:
26219370
41.

Canonical Single Nucleotide Polymorphisms (SNPs) for High-Resolution Subtyping of Shiga-Toxin Producing Escherichia coli (STEC) O157:H7.

Griffing SM, MacCannell DR, Schmidtke AJ, Freeman MM, Hyytiä-Trees E, Gerner-Smidt P, Ribot EM, Bono JL.

PLoS One. 2015 Jul 1;10(7):e0131967. doi: 10.1371/journal.pone.0131967. eCollection 2015.

42.

Complete Closed Genome Sequences of a Mannheimia haemolytica Serotype A1 Leukotoxin Deletion Mutant and Its Wild-Type Parent Strain.

Heaton MP, Harhay GP, Smith TP, Bono JL, Chitko-McKown CG.

Genome Announc. 2015 May 7;3(3). pii: e00417-15. doi: 10.1128/genomeA.00417-15.

43.
44.

Comparison of whole genome sequences from human and non-human Escherichia coli O26 strains.

Norman KN, Clawson ML, Strockbine NA, Mandrell RE, Johnson R, Ziebell K, Zhao S, Fratamico PM, Stones R, Allard MW, Bono JL.

Front Cell Infect Microbiol. 2015 Mar 11;5:21. doi: 10.3389/fcimb.2015.00021. eCollection 2015.

45.

Complete Genome Sequence for the Shellfish Pathogen Vibrio coralliilyticus RE98 Isolated from a Shellfish Hatchery.

Richards GP, Bono JL, Watson MA, Needleman DS.

Genome Announc. 2014 Dec 18;2(6). pii: e01253-14. doi: 10.1128/genomeA.01253-14.

46.

Complete Genome Sequence of the Larval Shellfish Pathogen Vibrio tubiashii Type Strain ATCC 19109.

Richards GP, Needleman DS, Watson MA, Bono JL.

Genome Announc. 2014 Dec 18;2(6). pii: e01252-14. doi: 10.1128/genomeA.01252-14.

47.

Effect of proximity to a cattle feedlot on Escherichia coli O157:H7 contamination of leafy greens and evaluation of the potential for airborne transmission.

Berry ED, Wells JE, Bono JL, Woodbury BL, Kalchayanand N, Norman KN, Suslow TV, López-Velasco G, Millner PD.

Appl Environ Microbiol. 2015 Feb;81(3):1101-10. doi: 10.1128/AEM.02998-14. Epub 2014 Dec 1.

48.

Comparative genomics of the Campylobacter lari group.

Miller WG, Yee E, Chapman MH, Smith TP, Bono JL, Huynh S, Parker CT, Vandamme P, Luong K, Korlach J.

Genome Biol Evol. 2014 Nov 8;6(12):3252-66. doi: 10.1093/gbe/evu249.

49.

Evaluation of real time PCR assays for the detection and enumeration of enterohemorrhagic Escherichia coli directly from cattle feces.

Luedtke BE, Bono JL, Bosilevac JM.

J Microbiol Methods. 2014 Oct;105:72-9. doi: 10.1016/j.mimet.2014.07.015. Epub 2014 Jul 23.

PMID:
25064761
50.

First Closed Genome Sequence of Campylobacter fetus subsp. venerealis bv. intermedius.

van der Graaf-van Bloois L, Miller WG, Yee E, Bono JL, Rijnsburger M, Campero C, Wagenaar JA, Duim B.

Genome Announc. 2014 Feb 6;2(1). pii: e01246-13. doi: 10.1128/genomeA.01246-13.

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