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Evaluation of OMNIgene® SPUTUM and ethanol reagent for preservation of sputum prior to Xpert and culture testing in Uganda.

Ardizzoni E, Orikiriza P, Ssuuna C, Nyehangane D, Gumsboga M, Taremwa IM, Turyashemererwa E, Mwanga-Amumpaire J, Langendorf C, Bonnet M.

J Clin Microbiol. 2019 Oct 16. pii: JCM.00810-19. doi: 10.1128/JCM.00810-19. [Epub ahead of print]


Intestinal Microbiota: A Novel Target to Improve Anti-Tumor Treatment?

Villéger R, Lopès A, Carrier G, Veziant J, Billard E, Barnich N, Gagnière J, Vazeille E, Bonnet M.

Int J Mol Sci. 2019 Sep 17;20(18). pii: E4584. doi: 10.3390/ijms20184584. Review.


A population-based analysis of French transfusion practices for women experiencing severe postpartum hemorrhage.

Deleu F, Deneux-Tharaux C, Chiesa-Dubruille C, Seco A, Bonnet MP; EPIMOMS study group (see Appendix).

Int J Obstet Anesth. 2019 Jul 19. pii: S0959-289X(18)30434-5. doi: 10.1016/j.ijoa.2019.07.006. [Epub ahead of print]


Spatial heterogeneity and hydrological fluctuations drive bacterioplankton community composition in an Amazon floodplain system.

Câmara Dos Reis M, Lacativa Bagatini I, de Oliveira Vidal L, Bonnet MP, da Motta Marques D, Sarmento H.

PLoS One. 2019 Aug 9;14(8):e0220695. doi: 10.1371/journal.pone.0220695. eCollection 2019.


Characterization of Inflammation in Delayed Cortical Transplantation.

Ballout N, Rochelle T, Brot S, Bonnet ML, Francheteau M, Prestoz L, Zibara K, Gaillard A.

Front Mol Neurosci. 2019 Jun 25;12:160. doi: 10.3389/fnmol.2019.00160. eCollection 2019.


Statistical model choice including variable selection based on variable importance: A relevant way for biomarkers selection to predict meat tenderness.

Ellies-Oury MP, Chavent M, Conanec A, Bonnet M, Picard B, Saracco J.

Sci Rep. 2019 Jul 10;9(1):10014. doi: 10.1038/s41598-019-46202-y.


Delivery Hospital Characteristics and Postpartum Maternal Mortality: A National Case-Control Study in France.

Saucedo M, Bouvier-Colle MH, Blondel B, Bonnet MP, Deneux-Tharaux C; ENCMM Study Group.

Anesth Analg. 2019 Jul 2. doi: 10.1213/ANE.0000000000004290. [Epub ahead of print]


The multiple sleep latency test.

Arand DL, Bonnet MH.

Handb Clin Neurol. 2019;160:393-403. doi: 10.1016/B978-0-444-64032-1.00026-6.


Milk proteome from in silico data aggregation allows the identification of putative biomarkers of negative energy balance in dairy cows.

Delosière M, Pires J, Bernard L, Cassar-Malek I, Bonnet M.

Sci Rep. 2019 Jul 4;9(1):9718. doi: 10.1038/s41598-019-46142-7.


Genome sequence and description of Coprococcus phoceensis gen. nov., sp. nov., a new bacterial genus isolated from the human left colon.

Bonnet M, Ricaboni D, Mailhe M, Vitton V, Benezech A, Delerce J, Raoult D, Cassir N, Lascola B, Khelaifia S.

New Microbes New Infect. 2019 Apr 10;30:100548. doi: 10.1016/j.nmni.2019.100548. eCollection 2019 Jul.


Pathways and biomarkers of marbling and carcass fat deposition in bovine revealed by a combination of gel-based and gel-free proteomic analyses.

Bazile J, Picard B, Chambon C, Valais A, Bonnet M.

Meat Sci. 2019 Oct;156:146-155. doi: 10.1016/j.meatsci.2019.05.018. Epub 2019 May 20.


Treatment of bone and joint infections caused by Enterobacter cloacae with a fluoroquinolone-cotrimoxazole combination.

Cisse H, Vernet-Garnier V, Hentzien M, Bajolet O, Lebrun D, Bonnet M, Ohl X, Diallo S, Bani-Sadr F.

Int J Antimicrob Agents. 2019 Aug;54(2):245-248. doi: 10.1016/j.ijantimicag.2019.05.010. Epub 2019 May 13.


Risk score for predicting mortality including urine lipoarabinomannan detection in hospital inpatients with HIV-associated tuberculosis in sub-Saharan Africa: Derivation and external validation cohort study.

Gupta-Wright A, Corbett EL, Wilson D, van Oosterhout JJ, Dheda K, Huerga H, Peter J, Bonnet M, Alufandika-Moyo M, Grint D, Lawn SD, Fielding K.

PLoS Med. 2019 Apr 5;16(4):e1002776. doi: 10.1371/journal.pmed.1002776. eCollection 2019 Apr.


Genome sequence and description of Traorella massiliensis gen. nov., sp. nov., a new bacterial genus isolated from human left colon.

Bonnet M, Mailhe M, Ricaboni D, Labas N, Richez M, Vitton V, Benezech A, Fournier PE, Million M, Raoult D, Khelaifia S.

New Microbes New Infect. 2019 Feb 22;29:100520. doi: 10.1016/j.nmni.2019.100520. eCollection 2019 May.


Pain management after laparoscopic hysterectomy: systematic review of literature and PROSPECT recommendations.

Lirk P, Thiry J, Bonnet MP, Joshi GP, Bonnet F; PROSPECT Working Group.

Reg Anesth Pain Med. 2019 Apr;44(4):425-436. doi: 10.1136/rapm-2018-100024. Epub 2019 Feb 3.


C5b9 Deposition in Glomerular Capillaries Is Associated With Poor Kidney Allograft Survival in Antibody-Mediated Rejection.

Goutaudier V, Perrochia H, Mucha S, Bonnet M, Delmas S, Garo F, Garrigue V, Lepreux S, Pernin V, Serre JE, Szwarc I, Merville P, Ramounau-Pigot A, René C, Visentin J, Morgan BP, Frémeaux-Bacchi V, Mourad G, Couzi L, Le Quintrec M.

Front Immunol. 2019 Mar 8;10:235. doi: 10.3389/fimmu.2019.00235. eCollection 2019.


Beef tenderness and intramuscular fat proteomic biomarkers: Effect of gender and rearing practices.

Picard B, Gagaoua M, Al Jammas M, Bonnet M.

J Proteomics. 2019 May 30;200:1-10. doi: 10.1016/j.jprot.2019.03.010. Epub 2019 Mar 17.


Patient blood management in obstetrics: prevention and treatment of postpartum haemorrhage. A NATA consensus statement.

Muñoz M, Stensballe J, Ducloy-Bouthors AS, Bonnet MP, De Robertis E, Fornet I, Goffinet F, Hofer S, Holzgreve W, Manrique S, Nizard J, Christory F, Samama CM, Hardy JF.

Blood Transfus. 2019 Mar;17(2):112-136. doi: 10.2450/2019.0245-18. Epub 2019 Feb 6.


Physiological effects of gamma irradiation in the honeybee, Apis mellifera.

Gagnaire B, Bonnet M, Tchamitchian S, Cavalié I, Della-Vedova C, Dubourg N, Adam-Guillermin C, Brunet JL, Belzunces LP.

Ecotoxicol Environ Saf. 2019 Jun 15;174:153-163. doi: 10.1016/j.ecoenv.2019.02.031. Epub 2019 Feb 27.


Update: Focus in-hospital maternal cardiac arrest.

Fischer C, Bonnet MP, Girault A, Le Ray C.

J Gynecol Obstet Hum Reprod. 2019 May;48(5):309-314. doi: 10.1016/j.jogoh.2019.02.007. Epub 2019 Feb 20. Review.


SNP-IT Tool for Identifying Subspecies and Associated Lineages of Mycobacterium tuberculosis Complex.

Lipworth S, Jajou R, de Neeling A, Bradley P, van der Hoek W, Maphalala G, Bonnet M, Sanchez-Padilla E, Diel R, Niemann S, Iqbal Z, Smith G, Peto T, Crook D, Walker T, van Soolingen D.

Emerg Infect Dis. 2019 Mar;25(3):482-488. doi: 10.3201/eid2503.180894.


Targeting the Tetraspanins with Monoclonal Antibodies in Oncology: Focus on Tspan8/Co-029.

Bonnet M, Maisonial-Besset A, Zhu Y, Witkowski T, Roche G, Boucheix C, Greco C, Degoul F.

Cancers (Basel). 2019 Feb 3;11(2). pii: E179. doi: 10.3390/cancers11020179. Review.


Mortality in the first six months among HIV-positive and HIV-negative patients empirically treated for tuberculosis.

Huerga H, Ferlazzo G, Wanjala S, Bastard M, Bevilacqua P, Ardizzoni E, Sitienei J, Bonnet M.

BMC Infect Dis. 2019 Feb 11;19(1):132. doi: 10.1186/s12879-019-3775-z.


Acute toxic limbic encephalopathy following glyphosate intoxication.

Planche V, Vergnet S, Auzou N, Bonnet M, Tourdias T, Tison F.

Neurology. 2019 Mar 12;92(11):534-536. doi: 10.1212/WNL.0000000000007115. Epub 2019 Feb 8. No abstract available.


High prevalence of infection and low incidence of disease in child contacts of patients with drug-resistant tuberculosis: a prospective cohort study.

Huerga H, Sanchez-Padilla E, Melikyan N, Atshemyan H, Hayrapetyan A, Ulumyan A, Bastard M, Khachatryan N, Hewison C, Varaine F, Bonnet M.

Arch Dis Child. 2019 Jul;104(7):622-628. doi: 10.1136/archdischild-2018-315411. Epub 2018 Dec 6.


"Stop bullying now!" Investigating the effectiveness of a serious game for teachers in promoting autonomy-supporting strategies for disabled adults: A randomized controlled trial.

Lievense P, Vacaru VS, Liber J, Bonnet M, Sterkenburg PS.

Disabil Health J. 2019 Apr;12(2):310-317. doi: 10.1016/j.dhjo.2018.11.013. Epub 2018 Nov 28.


Dialogue between Staphylococcus aureus SA15 and Lactococcus garvieae strains experiencing oxidative stress.

Queiroux C, Bonnet M, Saraoui T, Delpech P, Veisseire P, Rifa E, Moussard C, Gagne G, Delbès C, Bornes S.

BMC Microbiol. 2018 Nov 22;18(1):193. doi: 10.1186/s12866-018-1340-3.


Efficient and reproducible experimental infections of rats with Blastocystis spp.

Defaye M, Nourrisson C, Baudu E, Warwzyniak I, Bonnin V, Bonnet M, Barnich N, Ardid D, Delbac F, Carvalho FA, Poirier P.

PLoS One. 2018 Nov 19;13(11):e0207669. doi: 10.1371/journal.pone.0207669. eCollection 2018.


Deciphering the immune microenvironment of a tissue by digital imaging and cognition network.

Lopès A, Cassé AH, Billard E, Boulcourt-Sambou E, Roche G, Larois C, Barnich N, Naimi S, Bonnet M, Dumas B.

Sci Rep. 2018 Nov 12;8(1):16692. doi: 10.1038/s41598-018-34731-x.


Prevalence and risk factors of brucellosis among febrile patients attending a community hospital in south western Uganda.

Migisha R, Dan Nyehangane, Boum Y, Page AL, Zúñiga-Ripa A, Conde-Álvarez R, Bagenda F, Bonnet M.

Sci Rep. 2018 Oct 18;8(1):15465. doi: 10.1038/s41598-018-33915-9.


Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing.

CRyPTIC Consortium and the 100,000 Genomes Project, Allix-Béguec C, Arandjelovic I, Bi L, Beckert P, Bonnet M, Bradley P, Cabibbe AM, Cancino-Muñoz I, Caulfield MJ, Chaiprasert A, Cirillo DM, Clifton DA, Comas I, Crook DW, De Filippo MR, de Neeling H, Diel R, Drobniewski FA, Faksri K, Farhat MR, Fleming J, Fowler P, Fowler TA, Gao Q, Gardy J, Gascoyne-Binzi D, Gibertoni-Cruz AL, Gil-Brusola A, Golubchik T, Gonzalo X, Grandjean L, He G, Guthrie JL, Hoosdally S, Hunt M, Iqbal Z, Ismail N, Johnston J, Khanzada FM, Khor CC, Kohl TA, Kong C, Lipworth S, Liu Q, Maphalala G, Martinez E, Mathys V, Merker M, Miotto P, Mistry N, Moore DAJ, Murray M, Niemann S, Omar SV, Ong RT, Peto TEA, Posey JE, Prammananan T, Pym A, Rodrigues C, Rodrigues M, Rodwell T, Rossolini GM, Sánchez Padilla E, Schito M, Shen X, Shendure J, Sintchenko V, Sloutsky A, Smith EG, Snyder M, Soetaert K, Starks AM, Supply P, Suriyapol P, Tahseen S, Tang P, Teo YY, Thuong TNT, Thwaites G, Tortoli E, van Soolingen D, Walker AS, Walker TM, Wilcox M, Wilson DJ, Wyllie D, Yang Y, Zhang H, Zhao Y, Zhu B.

N Engl J Med. 2018 Oct 11;379(15):1403-1415. doi: 10.1056/NEJMoa1800474. Epub 2018 Sep 26.


Treatment correlates of successful outcomes in pulmonary multidrug-resistant tuberculosis: an individual patient data meta-analysis.

Collaborative Group for the Meta-Analysis of Individual Patient Data in MDR-TB treatment–2017, Ahmad N, Ahuja SD, Akkerman OW, Alffenaar JC, Anderson LF, Baghaei P, Bang D, Barry PM, Bastos ML, Behera D, Benedetti A, Bisson GP, Boeree MJ, Bonnet M, Brode SK, Brust JCM, Cai Y, Caumes E, Cegielski JP, Centis R, Chan PC, Chan ED, Chang KC, Charles M, Cirule A, Dalcolmo MP, D'Ambrosio L, de Vries G, Dheda K, Esmail A, Flood J, Fox GJ, Fréchet-Jachym M, Fregona G, Gayoso R, Gegia M, Gler MT, Gu S, Guglielmetti L, Holtz TH, Hughes J, Isaakidis P, Jarlsberg L, Kempker RR, Keshavjee S, Khan FA, Kipiani M, Koenig SP, Koh WJ, Kritski A, Kuksa L, Kvasnovsky CL, Kwak N, Lan Z, Lange C, Laniado-Laborín R, Lee M, Leimane V, Leung CC, Leung EC, Li PZ, Lowenthal P, Maciel EL, Marks SM, Mase S, Mbuagbaw L, Migliori GB, Milanov V, Miller AC, Mitnick CD, Modongo C, Mohr E, Monedero I, Nahid P, Ndjeka N, O'Donnell MR, Padayatchi N, Palmero D, Pape JW, Podewils LJ, Reynolds I, Riekstina V, Robert J, Rodriguez M, Seaworth B, Seung KJ, Schnippel K, Shim TS, Singla R, Smith SE, Sotgiu G, Sukhbaatar G, Tabarsi P, Tiberi S, Trajman A, Trieu L, Udwadia ZF, van der Werf TS, Veziris N, Viiklepp P, Vilbrun SC, Walsh K, Westenhouse J, Yew WW, Yim JJ, Zetola NM, Zignol M, Menzies D.

Lancet. 2018 Sep 8;392(10150):821-834. doi: 10.1016/S0140-6736(18)31644-1. Review.


Alternative sputum collection methods for diagnosis of childhood intrathoracic tuberculosis: a systematic literature review.

Ioos V, Cordel H, Bonnet M.

Arch Dis Child. 2019 Jul;104(7):629-635. doi: 10.1136/archdischild-2018-315453. Epub 2018 Aug 20.


Corrosion protection of Al(111) by 8-hydroxyquinoline: a comprehensive DFT study.

Chiter F, Bonnet ML, Lacaze-Dufaure C, Tang H, Pébère N.

Phys Chem Chem Phys. 2018 Aug 22;20(33):21474-21486. doi: 10.1039/c8cp03312a.


Direct and rapid identification of T315I-Mutated BCR-ABL expressing leukemic cells using infrared microspectroscopy.

Sandt C, Feraud O, Bonnet ML, Desterke C, Khedhir R, Flamant S, Bailey CG, Rasko JEJ, Dumas P, Bennaceur-Griscelli A, Turhan AG.

Biochem Biophys Res Commun. 2018 Sep 10;503(3):1861-1867. doi: 10.1016/j.bbrc.2018.07.127. Epub 2018 Jul 26.


Reverse Phase Protein array for the quantification and validation of protein biomarkers of beef qualities: The case of meat color from Charolais breed.

Gagaoua M, Bonnet M, De Koning L, Picard B.

Meat Sci. 2018 Nov;145:308-319. doi: 10.1016/j.meatsci.2018.06.039. Epub 2018 Jul 5.


Microbial markers in colorectal cancer detection and/or prognosis.

Villéger R, Lopès A, Veziant J, Gagnière J, Barnich N, Billard E, Boucher D, Bonnet M.

World J Gastroenterol. 2018 Jun 14;24(22):2327-2347. doi: 10.3748/wjg.v24.i22.2327. Review.


Beef tenderness and intramuscular fat proteomic biomarkers: muscle type effect.

Picard B, Gagaoua M, Al-Jammas M, De Koning L, Valais A, Bonnet M.

PeerJ. 2018 Jun 7;6:e4891. doi: 10.7717/peerj.4891. eCollection 2018.


Development of a Risk Score Based on Aortic Calcification to Predict 1-Year Mortality After Transcatheter Aortic Valve Replacement.

Lantelme P, Eltchaninoff H, Rabilloud M, Souteyrand G, Dupré M, Spaziano M, Bonnet M, Becle C, Riche B, Durand E, Bouvier E, Dacher JN, Courand PY, Cassagnes L, Dávila Serrano EE, Motreff P, Boussel L, Lefèvre T, Harbaoui B.

JACC Cardiovasc Imaging. 2019 Jan;12(1):123-132. doi: 10.1016/j.jcmg.2018.03.018. Epub 2018 May 16.


Xpert MTB/RIF diagnosis of childhood tuberculosis from sputum and stool samples in a high TB-HIV-prevalent setting.

Orikiriza P, Nansumba M, Nyehangane D, Bastard M, Mugisha IT, Nansera D, Mwanga-Amumpaire J, Boum Y 2nd, Kumbakumba E, Bonnet M.

Eur J Clin Microbiol Infect Dis. 2018 Aug;37(8):1465-1473. doi: 10.1007/s10096-018-3272-0. Epub 2018 May 8.


Experimental and integrative analyses identify an ETS1 network downstream of BCR-ABL in chronic myeloid leukemia (CML).

Desterke C, Voldoire M, Bonnet ML, Sorel N, Pagliaro S, Rahban H, Bennaceur-Griscelli A, Cayssials E, Chomel JC, Turhan AG.

Exp Hematol. 2018 Aug;64:71-83.e8. doi: 10.1016/j.exphem.2018.04.007. Epub 2018 May 5.


Placenta percreta is associated with more frequent severe maternal morbidity than placenta accreta.

Marcellin L, Delorme P, Bonnet MP, Grange G, Kayem G, Tsatsaris V, Goffinet F.

Am J Obstet Gynecol. 2018 Aug;219(2):193.e1-193.e9. doi: 10.1016/j.ajog.2018.04.049. Epub 2018 May 5.


Pharmacokinetics of efavirenz in patients on antituberculosis treatment in high human immunodeficiency virus and tuberculosis burden countries: A systematic review.

Atwine D, Bonnet M, Taburet AM.

Br J Clin Pharmacol. 2018 Aug;84(8):1641-1658. doi: 10.1111/bcp.13600. Epub 2018 May 22.


Comparison of different treatments for isoniazid-resistant tuberculosis: an individual patient data meta-analysis.

Fregonese F, Ahuja SD, Akkerman OW, Arakaki-Sanchez D, Ayakaka I, Baghaei P, Bang D, Bastos M, Benedetti A, Bonnet M, Cattamanchi A, Cegielski P, Chien JY, Cox H, Dedicoat M, Erkens C, Escalante P, Falzon D, Garcia-Prats AJ, Gegia M, Gillespie SH, Glynn JR, Goldberg S, Griffith D, Jacobson KR, Johnston JC, Jones-López EC, Khan A, Koh WJ, Kritski A, Lan ZY, Lee JH, Li PZ, Maciel EL, Galliez RM, Merle CSC, Munang M, Narendran G, Nguyen VN, Nunn A, Ohkado A, Park JS, Phillips PPJ, Ponnuraja C, Reves R, Romanowski K, Seung K, Schaaf HS, Skrahina A, Soolingen DV, Tabarsi P, Trajman A, Trieu L, Banurekha VV, Viiklepp P, Wang JY, Yoshiyama T, Menzies D.

Lancet Respir Med. 2018 Apr;6(4):265-275. doi: 10.1016/S2213-2600(18)30078-X. Erratum in: Lancet Respir Med. 2018 Apr 18;:.


Tackling mortality due to childhood tuberculosis.

Godreuil S, Marcy O, Wobudeya E, Bonnet M, Solassol J.

Lancet Public Health. 2018 Apr;3(4):e165. doi: 10.1016/S2468-2667(18)30049-5. Epub 2018 Mar 24. No abstract available.


Fit αβ T-cell receptor suppresses leukemogenesis of Pten-deficient thymocytes.

Gon S, Loosveld M, Crouzet T, Potier D, Bonnet M, Morin SO, Michel G, Vey N, Nunès JA, Malissen B, Roncagalli R, Nadel B, Payet-Bornet D.

Haematologica. 2018 Jun;103(6):999-1007. doi: 10.3324/haematol.2018.188359. Epub 2018 Mar 22.


Superoxide dismutase 2 (SOD2) contributes to genetic stability of native and T315I-mutated BCR-ABL expressing leukemic cells.

Girerd S, Tosca L, Herault O, Vignon C, Biard D, Aggoune D, Dkhissi F, Bonnet ML, Sorel N, Desterke C, Bennaceur-Griscelli A, Tachdjian G, Guilhot F, Guilhot J, Chomel JC, Turhan AG.

Biochem Biophys Res Commun. 2018 Apr 15;498(4):715-722. doi: 10.1016/j.bbrc.2018.03.023. Epub 2018 Mar 17.


Outcomes of HIV-infected versus HIV-non-infected patients treated for drug-resistance tuberculosis: Multicenter cohort study.

Bastard M, Sanchez-Padilla E, du Cros P, Khamraev AK, Parpieva N, Tillyashaykov M, Hayrapetyan A, Kimenye K, Khurkhumal S, Dlamini T, Perez SF, Telnov A, Hewison C, Varaine F, Bonnet M.

PLoS One. 2018 Mar 8;13(3):e0193491. doi: 10.1371/journal.pone.0193491. eCollection 2018.


Predictive factors for clinically significant pharmacist interventions at hospital admission.

Mongaret C, Quillet P, Vo TH, Aubert L, Fourgeaud M, Michelet-Huot E, Bonnet M, Bedouch P, Slimano F, Gangloff SC, Drame M, Hettler D.

Medicine (Baltimore). 2018 Mar;97(9):e9865. doi: 10.1097/MD.0000000000009865.


Complete Genome Sequence of Mycobacterium sp. Strain 4858.

Bouam A, Levasseur A, Bonnet M, Borand L, Van Goethem C, Drancourt M, Godreuil S.

Genome Announc. 2018 Feb 15;6(7). pii: e01604-17. doi: 10.1128/genomeA.01604-17.

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