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Items: 1 to 50 of 64

1.

Noncoding regions are the main source of targetable tumor-specific antigens.

Laumont CM, Vincent K, Hesnard L, Audemard É, Bonneil É, Laverdure JP, Gendron P, Courcelles M, Hardy MP, Côté C, Durette C, St-Pierre C, Benhammadi M, Lanoix J, Vobecky S, Haddad E, Lemieux S, Thibault P, Perreault C.

Sci Transl Med. 2018 Dec 5;10(470). pii: eaau5516. doi: 10.1126/scitranslmed.aau5516.

PMID:
30518613
2.

Monoubiquitination of ASXLs controls the deubiquitinase activity of the tumor suppressor BAP1.

Daou S, Barbour H, Ahmed O, Masclef L, Baril C, Sen Nkwe N, Tchelougou D, Uriarte M, Bonneil E, Ceccarelli D, Mashtalir N, Tanji M, Masson JY, Thibault P, Sicheri F, Yang H, Carbone M, Therrien M, Affar EB.

Nat Commun. 2018 Oct 22;9(1):4385. doi: 10.1038/s41467-018-06854-2.

3.

A Novel Differential Ion Mobility Device Expands the Depth of Proteome Coverage and the Sensitivity of Multiplex Proteomic Measurements.

Pfammatter S, Bonneil E, McManus FP, Prasad S, Bailey DJ, Belford M, Dunyach JJ, Thibault P.

Mol Cell Proteomics. 2018 Oct;17(10):2051-2067. doi: 10.1074/mcp.TIR118.000862. Epub 2018 Jul 14.

PMID:
30007914
4.

Gas-Phase Enrichment of Multiply Charged Peptide Ions by Differential Ion Mobility Extend the Comprehensiveness of SUMO Proteome Analyses.

Pfammatter S, Bonneil E, McManus FP, Thibault P.

J Am Soc Mass Spectrom. 2018 Jun;29(6):1111-1124. doi: 10.1007/s13361-018-1917-y. Epub 2018 Apr 5.

PMID:
29623662
5.

Insight from mitochondrial functions and proteomics to understand cardiometabolic disorders in survivors of acute lymphoblastic leukemia.

Leahy J, Spahis S, Bonneil E, Garofalo C, Grimard G, Morel S, Laverdière C, Krajinovic M, Drouin S, Delvin E, Sinnett D, Marcil V, Levy E.

Metabolism. 2018 Aug;85:151-160. doi: 10.1016/j.metabol.2018.03.011. Epub 2018 Mar 18.

PMID:
29563052
6.

Extended Synaptotagmin 1 Interacts with Herpes Simplex Virus 1 Glycoprotein M and Negatively Modulates Virus-Induced Membrane Fusion.

El Kasmi I, Khadivjam B, Lackman M, Duron J, Bonneil E, Thibault P, Lippé R.

J Virol. 2017 Dec 14;92(1). pii: e01281-17. doi: 10.1128/JVI.01281-17. Print 2018 Jan 1.

7.

Immunogenic stress and death of cancer cells: Contribution of antigenicity vs adjuvanticity to immunosurveillance.

Bloy N, Garcia P, Laumont CM, Pitt JM, Sistigu A, Stoll G, Yamazaki T, Bonneil E, Buqué A, Humeau J, Drijfhout JW, Meurice G, Walter S, Fritsche J, Weinschenk T, Rammensee HG, Melief C, Thibault P, Perreault C, Pol J, Zitvogel L, Senovilla L, Kroemer G.

Immunol Rev. 2017 Nov;280(1):165-174. doi: 10.1111/imr.12582. Review.

PMID:
29027230
8.

[Identification of proteins associated with transcription factors HOXA9 and E2A-PBX1 by tandem affinity purification].

Shestakova EA, Boutin M, Bourassa S, Bonneil E, Bijl JJ.

Mol Biol (Mosk). 2017 May-Jun;51(3):490-501. doi: 10.7868/S0026898417030132. Russian.

9.

Presence of diabetes autoantigens in extracellular vesicles derived from human islets.

Hasilo CP, Negi S, Allaeys I, Cloutier N, Rutman AK, Gasparrini M, Bonneil É, Thibault P, Boilard É, Paraskevas S.

Sci Rep. 2017 Jul 10;7(1):5000. doi: 10.1038/s41598-017-04977-y.

10.

MHC class I-associated peptides derive from selective regions of the human genome.

Pearson H, Daouda T, Granados DP, Durette C, Bonneil E, Courcelles M, Rodenbrock A, Laverdure JP, Côté C, Mader S, Lemieux S, Thibault P, Perreault C.

J Clin Invest. 2016 Dec 1;126(12):4690-4701. doi: 10.1172/JCI88590. Epub 2016 Nov 14.

11.

WITHDRAWN: Global and site-specific changes in 5-methylcytosine and 5-hydroxymethylcytosine after extended post-mortem interval.

Gross JA, Nagy C, Lin L, Bonneil É, Maheu M, Thibault P, Mechawar N, Jin P, Turecki G.

Exp Mol Pathol. 2016 Oct 14. pii: S0014-4800(16)30042-9. doi: 10.1016/j.yexmp.2016.10.004. [Epub ahead of print]

PMID:
27746278
12.

Improvement of Quantitative Measurements in Multiplex Proteomics Using High-Field Asymmetric Waveform Spectrometry.

Pfammatter S, Bonneil E, Thibault P.

J Proteome Res. 2016 Dec 2;15(12):4653-4665. Epub 2016 Oct 19.

PMID:
27723353
13.

Global and Site-Specific Changes in 5-Methylcytosine and 5-Hydroxymethylcytosine after Extended Post-mortem Interval.

Gross JA, Nagy C, Lin L, Bonneil É, Maheu M, Thibault P, Mechawar N, Jin P, Turecki G.

Front Genet. 2016 Jun 23;7:120. doi: 10.3389/fgene.2016.00120. eCollection 2016.

14.

Chromatin-Bound MDM2 Regulates Serine Metabolism and Redox Homeostasis Independently of p53.

Riscal R, Schrepfer E, Arena G, Cissé MY, Bellvert F, Heuillet M, Rambow F, Bonneil E, Sabourdy F, Vincent C, Ait-Arsa I, Levade T, Thibaut P, Marine JC, Portais JC, Sarry JE, Le Cam L, Linares LK.

Mol Cell. 2016 Jun 16;62(6):890-902. doi: 10.1016/j.molcel.2016.04.033. Epub 2016 Jun 2.

15.

Correction to "Caterpillar- and Salivary-Specific Modification of Plant Proteins".

Thivierge K, Prado A, Driscoll BT, Bonneil É, Thibault P, Bede JC.

J Proteome Res. 2016 May 6;15(5):1733. doi: 10.1021/acs.jproteome.6b00269. Epub 2016 Apr 13. No abstract available.

PMID:
27074414
16.

Proteogenomic-based discovery of minor histocompatibility antigens with suitable features for immunotherapy of hematologic cancers.

Granados DP, Rodenbrock A, Laverdure JP, Côté C, Caron-Lizotte O, Carli C, Pearson H, Janelle V, Durette C, Bonneil E, Roy DC, Delisle JS, Lemieux S, Thibault P, Perreault C.

Leukemia. 2016 Jun;30(6):1344-54. doi: 10.1038/leu.2016.22. Epub 2016 Feb 9.

PMID:
26857467
17.

Global proteogenomic analysis of human MHC class I-associated peptides derived from non-canonical reading frames.

Laumont CM, Daouda T, Laverdure JP, Bonneil É, Caron-Lizotte O, Hardy MP, Granados DP, Durette C, Lemieux S, Thibault P, Perreault C.

Nat Commun. 2016 Jan 5;7:10238. doi: 10.1038/ncomms10238.

18.

Enhancement of mass spectrometry performance for proteomic analyses using high-field asymmetric waveform ion mobility spectrometry (FAIMS).

Bonneil E, Pfammatter S, Thibault P.

J Mass Spectrom. 2015 Nov;50(11):1181-95. doi: 10.1002/jms.3646.

PMID:
26505763
19.

Undetectable histone O-GlcNAcylation in mammalian cells.

Gagnon J, Daou S, Zamorano N, Iannantuono NV, Hammond-Martel I, Mashtalir N, Bonneil E, Wurtele H, Thibault P, Affar el B.

Epigenetics. 2015;10(8):677-91. doi: 10.1080/15592294.2015.1060387.

20.

A high-sensitivity phospho-switch triggered by Cdk1 governs chromosome morphogenesis during cell division.

Robellet X, Thattikota Y, Wang F, Wee TL, Pascariu M, Shankar S, Bonneil É, Brown CM, D'Amours D.

Genes Dev. 2015 Feb 15;29(4):426-39. doi: 10.1101/gad.253294.114.

21.

Proteomic-coupled-network analysis of T877A-androgen receptor interactomes can predict clinical prostate cancer outcomes between White (non-Hispanic) and African-American groups.

Zaman N, Giannopoulos PN, Chowdhury S, Bonneil E, Thibault P, Wang E, Trifiro M, Paliouras M.

PLoS One. 2014 Nov 19;9(11):e113190. doi: 10.1371/journal.pone.0113190. eCollection 2014.

22.

Large-scale analysis of lysine SUMOylation by SUMO remnant immunoaffinity profiling.

Lamoliatte F, Caron D, Durette C, Mahrouche L, Maroui MA, Caron-Lizotte O, Bonneil E, Chelbi-Alix MK, Thibault P.

Nat Commun. 2014 Nov 13;5:5409. doi: 10.1038/ncomms6409.

PMID:
25391492
23.

UBAP2L is a novel BMI1-interacting protein essential for hematopoietic stem cell activity.

Bordeleau ME, Aucagne R, Chagraoui J, Girard S, Mayotte N, Bonneil E, Thibault P, Pabst C, Bergeron A, Barabé F, Hébert J, Sauvageau M, Boutonnet C, Meloche S, Sauvageau G.

Blood. 2014 Oct 9;124(15):2362-9. doi: 10.1182/blood-2014-01-548651. Epub 2014 Sep 2.

24.

Structural maintenance of chromosome (SMC) proteins link microtubule stability to genome integrity.

Laflamme G, Tremblay-Boudreault T, Roy MA, Andersen P, Bonneil É, Atchia K, Thibault P, D'Amours D, Kwok BH.

J Biol Chem. 2014 Oct 3;289(40):27418-31. doi: 10.1074/jbc.M114.569608. Epub 2014 Aug 18.

25.

Biochemical properties of glycosylation and characterization of a histidine acid phosphatase (phytase) expressed in Pichia pastoris.

Fonseca-Maldonado R, Maller A, Bonneil E, Thibault P, Botelho-Machado C, Ward RJ, Polizeli Mde L.

Protein Expr Purif. 2014 Jul;99:43-9. doi: 10.1016/j.pep.2014.03.006. Epub 2014 Mar 27.

PMID:
24680732
26.

Elucidating novel hepatitis C virus-host interactions using combined mass spectrometry and functional genomics approaches.

Germain MA, Chatel-Chaix L, Gagné B, Bonneil É, Thibault P, Pradezynski F, de Chassey B, Meyniel-Schicklin L, Lotteau V, Baril M, Lamarre D.

Mol Cell Proteomics. 2014 Jan;13(1):184-203. doi: 10.1074/mcp.M113.030155. Epub 2013 Oct 29.

27.

A host YB-1 ribonucleoprotein complex is hijacked by hepatitis C virus for the control of NS3-dependent particle production.

Chatel-Chaix L, Germain MA, Motorina A, Bonneil É, Thibault P, Baril M, Lamarre D.

J Virol. 2013 Nov;87(21):11704-20. doi: 10.1128/JVI.01474-13. Epub 2013 Aug 28.

28.

Cell cycle regulation of Greatwall kinase nuclear localization facilitates mitotic progression.

Wang P, Galan JA, Normandin K, Bonneil É, Hickson GR, Roux PP, Thibault P, Archambault V.

J Cell Biol. 2013 Jul 22;202(2):277-93. doi: 10.1083/jcb.201211141. Epub 2013 Jul 15.

29.

Engineering the pattern of protein glycosylation modulates the thermostability of a GH11 xylanase.

Fonseca-Maldonado R, Vieira DS, Alponti JS, Bonneil E, Thibault P, Ward RJ.

J Biol Chem. 2013 Aug 30;288(35):25522-34. doi: 10.1074/jbc.M113.485953. Epub 2013 Jul 11.

30.

Targeted identification of SUMOylation sites in human proteins using affinity enrichment and paralog-specific reporter ions.

Lamoliatte F, Bonneil E, Durette C, Caron-Lizotte O, Wildemann D, Zerweck J, Wenshuk H, Thibault P.

Mol Cell Proteomics. 2013 Sep;12(9):2536-50. doi: 10.1074/mcp.M112.025569. Epub 2013 Jun 7.

31.

Positive regulation of insulin signaling by neuraminidase 1.

Dridi L, Seyrantepe V, Fougerat A, Pan X, Bonneil E, Thibault P, Moreau A, Mitchell GA, Heveker N, Cairo CW, Issad T, Hinek A, Pshezhetsky AV.

Diabetes. 2013 Jul;62(7):2338-46. doi: 10.2337/db12-1825. Epub 2013 Mar 21.

32.

Insights into the insect salivary gland proteome: diet-associated changes in caterpillar labial salivary proteins.

Afshar K, Dube FF, Najafabadi HS, Bonneil E, Thibault P, Salavati R, Bede JC.

J Insect Physiol. 2013 Mar;59(3):351-66. doi: 10.1016/j.jinsphys.2013.01.002. Epub 2013 Jan 23.

PMID:
23353727
33.

Drosophila S2 cells secrete wingless on exosome-like vesicles but the wingless gradient forms independently of exosomes.

Beckett K, Monier S, Palmer L, Alexandre C, Green H, Bonneil E, Raposo G, Thibault P, Le Borgne R, Vincent JP.

Traffic. 2013 Jan;14(1):82-96. doi: 10.1111/tra.12016. Epub 2012 Oct 31.

34.

Proteomic profiling of a mouse model for ovarian granulosa cell tumor identifies VCP as a highly sensitive serum tumor marker in several human cancers.

Laguë MN, Romieu-Mourez R, Bonneil É, Boyer A, Pouletty N, Mes-Masson AM, Thibault P, Nadeau MÈ, Boerboom D.

PLoS One. 2012;7(8):e42470. doi: 10.1371/journal.pone.0042470. Epub 2012 Aug 1.

35.

Histone deacetylase inhibitors globally enhance h3/h4 tail acetylation without affecting h3 lysine 56 acetylation.

Drogaris P, Villeneuve V, Pomiès C, Lee EH, Bourdeau V, Bonneil E, Ferbeyre G, Verreault A, Thibault P.

Sci Rep. 2012;2:220. doi: 10.1038/srep00220. Epub 2012 Jan 12. No abstract available.

36.

IκB kinase ε-dependent phosphorylation and degradation of X-linked inhibitor of apoptosis sensitizes cells to virus-induced apoptosis.

Nakhaei P, Sun Q, Solis M, Mesplede T, Bonneil E, Paz S, Lin R, Hiscott J.

J Virol. 2012 Jan;86(2):726-37. doi: 10.1128/JVI.05989-11. Epub 2011 Nov 9.

37.

Improvement of phosphoproteome analyses using FAIMS and decision tree fragmentation. application to the insulin signaling pathway in Drosophila melanogaster S2 cells.

Bridon G, Bonneil E, Muratore-Schroeder T, Caron-Lizotte O, Thibault P.

J Proteome Res. 2012 Feb 3;11(2):927-40. doi: 10.1021/pr200722s. Epub 2011 Dec 1.

PMID:
22059388
38.

H3 lysine 4 is acetylated at active gene promoters and is regulated by H3 lysine 4 methylation.

Guillemette B, Drogaris P, Lin HH, Armstrong H, Hiragami-Hamada K, Imhof A, Bonneil E, Thibault P, Verreault A, Festenstein RJ.

PLoS Genet. 2011 Mar;7(3):e1001354. doi: 10.1371/journal.pgen.1001354. Epub 2011 Mar 31.

39.

A novel proteomics approach to identify SUMOylated proteins and their modification sites in human cells.

Galisson F, Mahrouche L, Courcelles M, Bonneil E, Meloche S, Chelbi-Alix MK, Thibault P.

Mol Cell Proteomics. 2011 Feb;10(2):M110.004796. doi: 10.1074/mcp.M110.004796. Epub 2010 Nov 22.

40.

ERK1/2 phosphorylate Raptor to promote Ras-dependent activation of mTOR complex 1 (mTORC1).

Carriere A, Romeo Y, Acosta-Jaquez HA, Moreau J, Bonneil E, Thibault P, Fingar DC, Roux PP.

J Biol Chem. 2011 Jan 7;286(1):567-77. doi: 10.1074/jbc.M110.159046. Epub 2010 Nov 11.

41.

The exon junction complex controls the splicing of MAPK and other long intron-containing transcripts in Drosophila.

Ashton-Beaucage D, Udell CM, Lavoie H, Baril C, Lefrançois M, Chagnon P, Gendron P, Caron-Lizotte O, Bonneil E, Thibault P, Therrien M.

Cell. 2010 Oct 15;143(2):251-62. doi: 10.1016/j.cell.2010.09.014.

42.

Caterpillar- and salivary-specific modification of plant proteins.

Thivierge K, Prado A, Driscoll BT, Bonneil E, Thibault P, Bede JC.

J Proteome Res. 2010 Nov 5;9(11):5887-95. doi: 10.1021/pr100643m. Epub 2010 Sep 21. Erratum in: J Proteome Res. 2016 May 6;15(5):1733.

PMID:
20857983
43.

Analysis of the biogenesis of heparan sulfate acetyl-CoA:alpha-glucosaminide N-acetyltransferase provides insights into the mechanism underlying its complete deficiency in mucopolysaccharidosis IIIC.

Durand S, Feldhammer M, Bonneil E, Thibault P, Pshezhetsky AV.

J Biol Chem. 2010 Oct 8;285(41):31233-42. doi: 10.1074/jbc.M110.141150. Epub 2010 Jul 22.

44.

Polo kinase regulates mitotic chromosome condensation by hyperactivation of condensin DNA supercoiling activity.

St-Pierre J, Douziech M, Bazile F, Pascariu M, Bonneil E, Sauvé V, Ratsima H, D'Amours D.

Mol Cell. 2009 May 14;34(4):416-26. doi: 10.1016/j.molcel.2009.04.013.

45.

Enhanced sensitivity in proteomics experiments using FAIMS coupled with a hybrid linear ion trap/Orbitrap mass spectrometer.

Saba J, Bonneil E, Pomiès C, Eng K, Thibault P.

J Proteome Res. 2009 Jul;8(7):3355-66. doi: 10.1021/pr801106a.

PMID:
19469569
46.

Photolabeling of tissue transglutaminase reveals the binding mode of potent cinnamoyl inhibitors.

Pardin C, Roy I, Chica RA, Bonneil E, Thibault P, Lubell WD, Pelletier JN, Keillor JW.

Biochemistry. 2009 Apr 21;48(15):3346-53. doi: 10.1021/bi802021c.

PMID:
19271761
47.
48.

An enhanced mass spectrometry approach reveals human embryonic stem cell growth factors in culture.

Bendall SC, Hughes C, Campbell JL, Stewart MH, Pittock P, Liu S, Bonneil E, Thibault P, Bhatia M, Lajoie GA.

Mol Cell Proteomics. 2009 Mar;8(3):421-32. doi: 10.1074/mcp.M800190-MCP200. Epub 2008 Oct 20.

49.

Oncogenic MAPK signaling stimulates mTORC1 activity by promoting RSK-mediated raptor phosphorylation.

Carrière A, Cargnello M, Julien LA, Gao H, Bonneil E, Thibault P, Roux PP.

Curr Biol. 2008 Sep 9;18(17):1269-77. doi: 10.1016/j.cub.2008.07.078. Epub 2008 Aug 21.

50.

Phosphorylation of IRF-3 on Ser 339 generates a hyperactive form of IRF-3 through regulation of dimerization and CBP association.

Clément JF, Bibeau-Poirier A, Gravel SP, Grandvaux N, Bonneil E, Thibault P, Meloche S, Servant MJ.

J Virol. 2008 Apr;82(8):3984-96. doi: 10.1128/JVI.02526-07. Epub 2008 Feb 13.

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