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Items: 31

1.

Distinct and evolutionary conserved structural features of the human nuclear exosome complex.

Gerlach P, Schuller JM, Bonneau F, Basquin J, Reichelt P, Falk S, Conti E.

Elife. 2018 Jul 26;7. pii: e38686. doi: 10.7554/eLife.38686.

2.

A conserved structural element in the RNA helicase UPF1 regulates its catalytic activity in an isoform-specific manner.

Gowravaram M, Bonneau F, Kanaan J, Maciej VD, Fiorini F, Raj S, Croquette V, Le Hir H, Chakrabarti S.

Nucleic Acids Res. 2018 Mar 16;46(5):2648-2659. doi: 10.1093/nar/gky040.

3.

Mpp6 Incorporation in the Nuclear Exosome Contributes to RNA Channeling through the Mtr4 Helicase.

Falk S, Bonneau F, Ebert J, Kögel A, Conti E.

Cell Rep. 2017 Sep 5;20(10):2279-2286. doi: 10.1016/j.celrep.2017.08.033.

4.

Sen1 has unique structural features grafted on the architecture of the Upf1-like helicase family.

Leonaitė B, Han Z, Basquin J, Bonneau F, Libri D, Porrua O, Conti E.

EMBO J. 2017 Jun 1;36(11):1590-1604. doi: 10.15252/embj.201696174. Epub 2017 Apr 13.

5.

Structural basis for the antagonistic roles of RNP-8 and GLD-3 in GLD-2 poly(A)-polymerase activity.

Nakel K, Bonneau F, Basquin C, Habermann B, Eckmann CR, Conti E.

RNA. 2016 Aug;22(8):1139-45. doi: 10.1261/rna.056598.116. Epub 2016 Jun 10.

6.

Structure of the RNA Helicase MLE Reveals the Molecular Mechanisms for Uridine Specificity and RNA-ATP Coupling.

Prabu JR, Müller M, Thomae AW, Schüssler S, Bonneau F, Becker PB, Conti E.

Mol Cell. 2015 Nov 5;60(3):487-99. doi: 10.1016/j.molcel.2015.10.011.

7.

Structural basis for the activation of the C. elegans noncanonical cytoplasmic poly(A)-polymerase GLD-2 by GLD-3.

Nakel K, Bonneau F, Eckmann CR, Conti E.

Proc Natl Acad Sci U S A. 2015 Jul 14;112(28):8614-9. doi: 10.1073/pnas.1504648112. Epub 2015 Jun 29.

8.

Structural model of a CRISPR RNA-silencing complex reveals the RNA-target cleavage activity in Cmr4.

Benda C, Ebert J, Scheltema RA, Schiller HB, Baumgärtner M, Bonneau F, Mann M, Conti E.

Mol Cell. 2014 Oct 2;56(1):43-54. doi: 10.1016/j.molcel.2014.09.002.

9.

The molecular architecture of the TRAMP complex reveals the organization and interplay of its two catalytic activities.

Falk S, Weir JR, Hentschel J, Reichelt P, Bonneau F, Conti E.

Mol Cell. 2014 Sep 18;55(6):856-867. doi: 10.1016/j.molcel.2014.07.020. Epub 2014 Aug 28.

10.

Phospho-dependent and phospho-independent interactions of the helicase UPF1 with the NMD factors SMG5-SMG7 and SMG6.

Chakrabarti S, Bonneau F, Schüssler S, Eppinger E, Conti E.

Nucleic Acids Res. 2014 Aug;42(14):9447-60. doi: 10.1093/nar/gku578. Epub 2014 Jul 10.

11.

The structure of the Pan2-Pan3 core complex reveals cross-talk between deadenylase and pseudokinase.

Schäfer IB, Rode M, Bonneau F, Schüssler S, Conti E.

Nat Struct Mol Biol. 2014 Jul;21(7):591-8. doi: 10.1038/nsmb.2834. Epub 2014 Jun 1.

PMID:
24880344
12.

Structural and biochemical insights to the role of the CCR4-NOT complex and DDX6 ATPase in microRNA repression.

Mathys H, Basquin J, Ozgur S, Czarnocki-Cieciura M, Bonneau F, Aartse A, Dziembowski A, Nowotny M, Conti E, Filipowicz W.

Mol Cell. 2014 Jun 5;54(5):751-65. doi: 10.1016/j.molcel.2014.03.036. Epub 2014 Apr 24.

13.

Biochemical characterization of the RNA helicase UPF1 involved in nonsense-mediated mRNA decay.

Fiorini F, Bonneau F, Le Hir H.

Methods Enzymol. 2012;511:255-74. doi: 10.1016/B978-0-12-396546-2.00012-7.

PMID:
22713324
14.

Recombinant protein quality evaluation: proposal for a minimal information standard.

Buckle AM, Bate MA, Androulakis S, Cinquanta M, Basquin J, Bonneau F, Chatterjee DK, Cittaro D, Gräslund S, Gruszka A, Page R, Suppmann S, Wheeler JX, Agostini D, Taussig M, Taylor CF, Bottomley SP, Villaverde A, de Marco A.

Stand Genomic Sci. 2011 Nov 30;5(2):195-7. doi: 10.4056/sigs.1834511. Epub 2011 Nov 22. No abstract available.

15.

Molecular mechanisms for the RNA-dependent ATPase activity of Upf1 and its regulation by Upf2.

Chakrabarti S, Jayachandran U, Bonneau F, Fiorini F, Basquin C, Domcke S, Le Hir H, Conti E.

Mol Cell. 2011 Mar 18;41(6):693-703. doi: 10.1016/j.molcel.2011.02.010.

16.

RNA channelling by the eukaryotic exosome.

Malet H, Topf M, Clare DK, Ebert J, Bonneau F, Basquin J, Drazkowska K, Tomecki R, Dziembowski A, Conti E, Saibil HR, Lorentzen E.

EMBO Rep. 2010 Dec;11(12):936-42. doi: 10.1038/embor.2010.164. Epub 2010 Nov 12.

17.

Four KH domains of the C. elegans Bicaudal-C ortholog GLD-3 form a globular structural platform.

Nakel K, Hartung SA, Bonneau F, Eckmann CR, Conti E.

RNA. 2010 Nov;16(11):2058-67. doi: 10.1261/rna.2315010. Epub 2010 Sep 7.

18.

Structural analysis reveals the characteristic features of Mtr4, a DExH helicase involved in nuclear RNA processing and surveillance.

Weir JR, Bonneau F, Hentschel J, Conti E.

Proc Natl Acad Sci U S A. 2010 Jul 6;107(27):12139-44. doi: 10.1073/pnas.1004953107. Epub 2010 Jun 21.

19.

The yeast exosome functions as a macromolecular cage to channel RNA substrates for degradation.

Bonneau F, Basquin J, Ebert J, Lorentzen E, Conti E.

Cell. 2009 Oct 30;139(3):547-59. doi: 10.1016/j.cell.2009.08.042.

20.

Solubility survey of fragments of the neurofibromatosis type 1 protein neurofibromin.

Bonneau F, Lenherr ED, Pena V, Hart DJ, Scheffzek K.

Protein Expr Purif. 2009 May;65(1):30-7. doi: 10.1016/j.pep.2008.12.001. Epub 2008 Dec 10.

PMID:
19111619
21.

Diagnostics hardening for harsh environment in Laser Megajoule (invited).

Bourgade JL, Marmoret R, Darbon S, Rosch R, Troussel P, Villette B, Glebov V, Shmayda WT, Gomme JC, Le Tonqueze Y, Aubard F, Baggio J, Bazzoli S, Bonneau F, Boutin JY, Caillaud T, Chollet C, Combis P, Disdier L, Gazave J, Girard S, Gontier D, Jaanimagi P, Jacquet HP, Jadaud JP, Landoas O, Legendre J, Leray JL, Maroni R, Meyerhofer DD, Miquel JL, Marshall FJ, Masclet-Gobin I, Pien G, Raimbourg J, Reverdin C, Richard A, Rubin de Cervens D, Sangster CT, Seaux JP, Soullie G, Stoeckl C, Thfoin I, Videau L, Zuber C.

Rev Sci Instrum. 2008 Oct;79(10):10F301. doi: 10.1063/1.2991161.

PMID:
19044614
22.

The C2 domain of SynGAP is essential for stimulation of the Rap GTPase reaction.

Pena V, Hothorn M, Eberth A, Kaschau N, Parret A, Gremer L, Bonneau F, Ahmadian MR, Scheffzek K.

EMBO Rep. 2008 Apr;9(4):350-5. doi: 10.1038/embor.2008.20. Epub 2008 Mar 7.

23.

NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity.

Chamieh H, Ballut L, Bonneau F, Le Hir H.

Nat Struct Mol Biol. 2008 Jan;15(1):85-93. Epub 2007 Dec 9.

PMID:
18066079
24.

A novel bipartite phospholipid-binding module in the neurofibromatosis type 1 protein.

D'Angelo I, Welti S, Bonneau F, Scheffzek K.

EMBO Rep. 2006 Feb;7(2):174-9.

25.

Human Lsg1 defines a family of essential GTPases that correlates with the evolution of compartmentalization.

Reynaud EG, Andrade MA, Bonneau F, Ly TB, Knop M, Scheffzek K, Pepperkok R.

BMC Biol. 2005 Oct 7;3:21.

26.

Expression, purification and preliminary crystallographic characterization of a novel segment from the neurofibromatosis type 1 protein.

Bonneau F, D'Angelo I, Welti S, Stier G, Ylänne J, Scheffzek K.

Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 2):2364-7. Epub 2004 Nov 26.

PMID:
15583390
27.

Bacterial expression, purification and preliminary X-ray crystallographic characterization of the invertase inhibitor Nt-CIF from tobacco.

Hothorn M, Bonneau F, Stier G, Greiner S, Scheffzek K.

Acta Crystallogr D Biol Crystallogr. 2003 Dec;59(Pt 12):2279-82. Epub 2003 Nov 27.

PMID:
14646094
28.

Localized pulsed laser interaction with submicronic gold particles embedded in silica: a method for investigating laser damage initiation.

Natoli JY, Gallais L, Bertussi B, During A, Commandre M, Rullier JL, Bonneau F, Combis P.

Opt Express. 2003 Apr 7;11(7):824-9.

PMID:
19461795
29.

Involvement of neutrophilic granulocytes in the uptake of biodegradable non-stealth and stealth nanoparticles in guinea pig.

Zambaux MF, Faivre-Fiorina B, Bonneau F, Marchal S, Merlin JL, Dellacherie E, Labrude P, Vigneron C.

Biomaterials. 2000 May;21(10):975-80.

PMID:
10768748
30.

CCR5 HIV-1 coreceptor activity. Role of cooperativity between residues in N-terminal extracellular and intracellular domains.

Wang Z, Lee B, Murray JL, Bonneau F, Sun Y, Schweickart V, Zhang T, Peiper SC.

J Biol Chem. 1999 Oct 1;274(40):28413-9.

31.

[Corticotropic macroadenoma: clinical, hormonal, radiological and immunocytochemical study of 6 cases].

Maréchaud R, Humbert C, Bonneau F, Saint-André JP, Bataille B, Fieuzal S, Prono C, Vandermarcq P.

Rev Med Interne. 1993;14(10):989. French.

PMID:
8009082

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