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Items: 25

1. a repository for scientific information on mesophotic ecosystems.

Bongaerts P, Perez-Rosales G, Radice VZ, Eyal G, Gori A, Gress E, Hammerman NM, Hernandez-Agreda A, Laverick J, Muir P, Pinheiro H, Pyle RL, Rocha L, Turner JA, Booker R.

Database (Oxford). 2019 Jan 1;2019. pii: baz140. doi: 10.1093/database/baz140.


High species richness and lineage diversity of reef corals in the mesophotic zone.

Muir PR, Wallace CC, Pichon M, Bongaerts P.

Proc Biol Sci. 2018 Dec 19;285(1893):20181987. doi: 10.1098/rspb.2018.1987.


Morphological and genetic divergence between Mediterranean and Caribbean populations of Madracis pharensis (Heller 1868) (Scleractinia, Pocilloporidae): too much for one species?

Benzoni F, Arrigoni R, Berumen ML, Taviani M, Bongaerts P, Frade PR.

Zootaxa. 2018 Sep 6;4471(3):473-492. doi: 10.11646/zootaxa.4471.3.3.


Rethinking the Coral Microbiome: Simplicity Exists within a Diverse Microbial Biosphere.

Hernandez-Agreda A, Leggat W, Bongaerts P, Herrera C, Ainsworth TD.

mBio. 2018 Oct 9;9(5). pii: e00812-18. doi: 10.1128/mBio.00812-18.


Erratum: Publisher Correction: Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis.

Liu H, Stephens TG, González-Pech RA, Beltran VH, Lapeyre B, Bongaerts P, Cooke I, Aranda M, Bourne DG, Forêt S, Miller DJ, van Oppen MJH, Voolstra CR, Ragan MA, Chan CX.

Commun Biol. 2018 Aug 23;1:126. doi: 10.1038/s42003-018-0117-4. eCollection 2018.


Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis.

Liu H, Stephens TG, González-Pech RA, Beltran VH, Lapeyre B, Bongaerts P, Cooke I, Aranda M, Bourne DG, Forêt S, Miller DJ, van Oppen MJH, Voolstra CR, Ragan MA, Chan CX.

Commun Biol. 2018 Jul 17;1:95. doi: 10.1038/s42003-018-0098-3. eCollection 2018. Erratum in: Commun Biol. 2018 Aug 23;1:126.


Deep reefs of the Great Barrier Reef offer limited thermal refuge during mass coral bleaching.

Frade PR, Bongaerts P, Englebert N, Rogers A, Gonzalez-Rivero M, Hoegh-Guldberg O.

Nat Commun. 2018 Sep 4;9(1):3447. doi: 10.1038/s41467-018-05741-0.


Mesophotic coral ecosystems are threatened and ecologically distinct from shallow water reefs.

Rocha LA, Pinheiro HT, Shepherd B, Papastamatiou YP, Luiz OJ, Pyle RL, Bongaerts P.

Science. 2018 Jul 20;361(6399):281-284. doi: 10.1126/science.aaq1614.


Adaptation to reef habitats through selection on the coral animal and its associated microbiome.

van Oppen MJH, Bongaerts P, Frade P, Peplow LM, Boyd SE, Nim HT, Bay LK.

Mol Ecol. 2018 Jul;27(14):2956-2971. doi: 10.1111/mec.14763. Epub 2018 Jun 30.


Microbiome variation in corals with distinct depth distribution ranges across a shallow-mesophotic gradient (15-85 m).

Glasl B, Bongaerts P, Elisabeth NH, Hoegh-Guldberg O, Herndl GJ, Frade PR.

Coral Reefs. 2017;36(2):447-452. doi: 10.1007/s00338-016-1517-x. Epub 2017 Jan 10.


Deep reefs are not universal refuges: Reseeding potential varies among coral species.

Bongaerts P, Riginos C, Brunner R, Englebert N, Smith SR, Hoegh-Guldberg O.

Sci Adv. 2017 Feb 15;3(2):e1602373. doi: 10.1126/sciadv.1602373. eCollection 2017 Feb.


Lower Mesophotic Coral Communities (60-125 m Depth) of the Northern Great Barrier Reef and Coral Sea.

Englebert N, Bongaerts P, Muir PR, Hay KB, Pichon M, Hoegh-Guldberg O.

PLoS One. 2017 Feb 1;12(2):e0170336. doi: 10.1371/journal.pone.0170336. eCollection 2017.


Navigating the currents of seascape genomics: how spatial analyses can augment population genomic studies.

Riginos C, Crandall ED, Liggins L, Bongaerts P, Treml EA.

Curr Zool. 2016 Dec;62(6):581-601. doi: 10.1093/cz/zow067. Epub 2016 Jul 6.


The Microbial Signature Provides Insight into the Mechanistic Basis of Coral Success across Reef Habitats.

Hernandez-Agreda A, Leggat W, Bongaerts P, Ainsworth TD.

mBio. 2016 Jul 26;7(4). pii: e00560-16. doi: 10.1128/mBio.00560-16.


Prevalent endosymbiont zonation shapes the depth distributions of scleractinian coral species.

Bongaerts P, Carmichael M, Hay KB, Tonk L, Frade PR, Hoegh-Guldberg O.

R Soc Open Sci. 2015 Feb 11;2(2):140297. doi: 10.1098/rsos.140297. eCollection 2015 Feb.


The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts.

D Ainsworth T, Krause L, Bridge T, Torda G, Raina JB, Zakrzewski M, Gates RD, Padilla-Gamiño JL, Spalding HL, Smith C, Woolsey ES, Bourne DG, Bongaerts P, Hoegh-Guldberg O, Leggat W.

ISME J. 2015 Oct;9(10):2261-74. doi: 10.1038/ismej.2015.39. Epub 2015 Apr 17.


Diverse staghorn coral fauna on the mesophotic reefs of north-east Australia.

Muir P, Wallace C, Bridge TC, Bongaerts P.

PLoS One. 2015 Feb 25;10(2):e0117933. doi: 10.1371/journal.pone.0117933. eCollection 2015.


Habitat-specific environmental conditions primarily control the microbiomes of the coral Seriatopora hystrix.

Pantos O, Bongaerts P, Dennis PG, Tyson GW, Hoegh-Guldberg O.

ISME J. 2015 Sep;9(9):1916-27. doi: 10.1038/ismej.2015.3. Epub 2015 Feb 10.


Deep down on a Caribbean reef: lower mesophotic depths harbor a specialized coral-endosymbiont community.

Bongaerts P, Frade PR, Hay KB, Englebert N, Latijnhouwers KR, Bak RP, Vermeij MJ, Hoegh-Guldberg O.

Sci Rep. 2015 Jan 7;5:7652. doi: 10.1038/srep07652.


Sharing the slope: depth partitioning of agariciid corals and associated Symbiodinium across shallow and mesophotic habitats (2-60 m) on a Caribbean reef.

Bongaerts P, Frade PR, Ogier JJ, Hay KB, van Bleijswijk J, Englebert N, Vermeij MJ, Bak RP, Visser PM, Hoegh-Guldberg O.

BMC Evol Biol. 2013 Sep 23;13:205. doi: 10.1186/1471-2148-13-205.


SymbioGBR: a web-based database of Symbiodinium associated with cnidarian hosts on the Great Barrier Reef.

Tonk L, Bongaerts P, Sampayo EM, Hoegh-Guldberg O.

BMC Ecol. 2013 Mar 13;13:7. doi: 10.1186/1472-6785-13-7.


Adaptive divergence in a scleractinian coral: physiological adaptation of Seriatopora hystrix to shallow and deep reef habitats.

Bongaerts P, Riginos C, Hay KB, van Oppen MJ, Hoegh-Guldberg O, Dove S.

BMC Evol Biol. 2011 Oct 17;11:303. doi: 10.1186/1471-2148-11-303.


The role of deep reefs in shallow reef recovery: an assessment of vertical connectivity in a brooding coral from west and east Australia.

van Oppen MJ, Bongaerts P, Underwood JN, Peplow LM, Cooper TF.

Mol Ecol. 2011 Apr;20(8):1647-60. doi: 10.1111/j.1365-294X.2011.05050.x. Epub 2011 Mar 16.


Genetic divergence across habitats in the widespread coral Seriatopora hystrix and its associated Symbiodinium.

Bongaerts P, Riginos C, Ridgway T, Sampayo EM, van Oppen MJ, Englebert N, Vermeulen F, Hoegh-Guldberg O.

PLoS One. 2010 May 27;5(5):e10871. doi: 10.1371/journal.pone.0010871.


Bleaching susceptibility and mortality of corals are determined by fine-scale differences in symbiont type.

Sampayo EM, Ridgway T, Bongaerts P, Hoegh-Guldberg O.

Proc Natl Acad Sci U S A. 2008 Jul 29;105(30):10444-9. doi: 10.1073/pnas.0708049105. Epub 2008 Jul 21.

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