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bHLH-PAS protein RITMO1 regulates diel biological rhythms in the marine diatom Phaeodactylum tricornutum.

Annunziata R, Ritter A, Fortunato AE, Manzotti A, Cheminant-Navarro S, Agier N, Huysman MJJ, Winge P, Bones AM, Bouget FY, Cosentino Lagomarsino M, Bouly JP, Falciatore A.

Proc Natl Acad Sci U S A. 2019 Jun 6. pii: 201819660. doi: 10.1073/pnas.1819660116. [Epub ahead of print]


Dietary fatty acid source has little effect on the development of the immune system in the pyloric caeca of Atlantic salmon fry.

Jalili M, Jin Y, Bones AM, Olsen Y, Vadstein O, Østensen MA, Buonocore F, Gerdol M, Pallavicini A, Scapigliati G.

Sci Rep. 2019 Jan 10;9(1):27. doi: 10.1038/s41598-018-37266-3.


Unique photosynthetic electron transport tuning and excitation distribution in heterokont algae.

Røkke GB, Melø TB, Mühlroth A, Vadstein O, Bones AM, Hohmann-Marriott MF.

PLoS One. 2019 Jan 9;14(1):e0209920. doi: 10.1371/journal.pone.0209920. eCollection 2019.


Accumulation of Ag(I) by Saccharomyces cerevisiae Cells Expressing Plant Metallothioneins.

Ruta LL, Banu MA, Neagoe AD, Kissen R, Bones AM, Farcasanu IC.

Cells. 2018 Dec 11;7(12). pii: E266. doi: 10.3390/cells7120266.


Transgene-free genome editing in marine algae by bacterial conjugation - comparison with biolistic CRISPR/Cas9 transformation.

Sharma AK, Nymark M, Sparstad T, Bones AM, Winge P.

Sci Rep. 2018 Sep 26;8(1):14401. doi: 10.1038/s41598-018-32342-0.


Benzyl Cyanide Leads to Auxin-Like Effects Through the Action of Nitrilases in Arabidopsis thaliana.

Urbancsok J, Bones AM, Kissen R.

Front Plant Sci. 2018 Aug 24;9:1240. doi: 10.3389/fpls.2018.01240. eCollection 2018.


Genome editing in diatoms: achievements and goals.

Kroth PG, Bones AM, Daboussi F, Ferrante MI, Jaubert M, Kolot M, Nymark M, Río Bártulos C, Ritter A, Russo MT, Serif M, Winge P, Falciatore A.

Plant Cell Rep. 2018 Oct;37(10):1401-1408. doi: 10.1007/s00299-018-2334-1. Epub 2018 Aug 23. Review.


Rearing Water Treatment Induces Microbial Selection Influencing the Microbiota and Pathogen Associated Transcripts of Cod (Gadus morhua) Larvae.

Vestrum RI, Attramadal KJK, Winge P, Li K, Olsen Y, Bones AM, Vadstein O, Bakke I.

Front Microbiol. 2018 May 1;9:851. doi: 10.3389/fmicb.2018.00851. eCollection 2018.


Molecular adaptations to phosphorus deprivation and comparison with nitrogen deprivation responses in the diatom Phaeodactylum tricornutum.

Alipanah L, Winge P, Rohloff J, Najafi J, Brembu T, Bones AM.

PLoS One. 2018 Feb 23;13(2):e0193335. doi: 10.1371/journal.pone.0193335. eCollection 2018.


Glucosinolate-Derived Isothiocyanates Inhibit Arabidopsis Growth and the Potency Depends on Their Side Chain Structure.

Urbancsok J, Bones AM, Kissen R.

Int J Mol Sci. 2017 Nov 8;18(11). pii: E2372. doi: 10.3390/ijms18112372.


Mechanisms of Phosphorus Acquisition and Lipid Class Remodeling under P Limitation in a Marine Microalga.

Mühlroth A, Winge P, El Assimi A, Jouhet J, Maréchal E, Hohmann-Marriott MF, Vadstein O, Bones AM.

Plant Physiol. 2017 Dec;175(4):1543-1559. doi: 10.1104/pp.17.00621. Epub 2017 Oct 19.


The effects of phosphorus limitation on carbon metabolism in diatoms.

Brembu T, Mühlroth A, Alipanah L, Bones AM.

Philos Trans R Soc Lond B Biol Sci. 2017 Sep 5;372(1728). pii: 20160406. doi: 10.1098/rstb.2016.0406. Review.


The IDA-LIKE peptides IDL6 and IDL7 are negative modulators of stress responses in Arabidopsis thaliana.

Vie AK, Najafi J, Winge P, Cattan E, Wrzaczek M, Kangasjärvi J, Miller G, Brembu T, Bones AM.

J Exp Bot. 2017 Jun 15;68(13):3557-3571. doi: 10.1093/jxb/erx168.


Heavy metal accumulation by Saccharomyces cerevisiae cells armed with metal binding hexapeptides targeted to the inner face of the plasma membrane.

Ruta LL, Kissen R, Nicolau I, Neagoe AD, Petrescu AJ, Bones AM, Farcasanu IC.

Appl Microbiol Biotechnol. 2017 Jul;101(14):5749-5763. doi: 10.1007/s00253-017-8335-0. Epub 2017 Jun 3.


Anchoring plant metallothioneins to the inner face of the plasma membrane of Saccharomyces cerevisiae cells leads to heavy metal accumulation.

Ruta LL, Lin YF, Kissen R, Nicolau I, Neagoe AD, Ghenea S, Bones AM, Farcasanu IC.

PLoS One. 2017 May 31;12(5):e0178393. doi: 10.1371/journal.pone.0178393. eCollection 2017.


Gene Mining for Proline Based Signaling Proteins in Cell Wall of Arabidopsis thaliana.

Ihsan MZ, Ahmad SJ, Shah ZH, Rehman HM, Aslam Z, Ahuja I, Bones AM, Ahmad JN.

Front Plant Sci. 2017 Feb 27;8:233. doi: 10.3389/fpls.2017.00233. eCollection 2017. Review.


The RopGEF2-ROP7/ROP2 Pathway Activated by phyB Suppresses Red Light-Induced Stomatal Opening.

Wang W, Liu Z, Bao LJ, Zhang SS, Zhang CG, Li X, Li HX, Zhang XL, Bones AM, Yang ZB, Chen YL.

Plant Physiol. 2017 Jun;174(2):717-731. doi: 10.1104/pp.16.01727. Epub 2017 Feb 10.


Arabidopsis myrosinases link the glucosinolate-myrosinase system and the cuticle.

Ahuja I, de Vos RC, Rohloff J, Stoopen GM, Halle KK, Ahmad SJ, Hoang L, Hall RD, Bones AM.

Sci Rep. 2016 Dec 15;6:38990. doi: 10.1038/srep38990.


Effect of growth temperature on glucosinolate profiles in Arabidopsis thaliana accessions.

Kissen R, Eberl F, Winge P, Uleberg E, Martinussen I, Bones AM.

Phytochemistry. 2016 Oct;130:106-18. doi: 10.1016/j.phytochem.2016.06.003. Epub 2016 Jun 16.


A CRISPR/Cas9 system adapted for gene editing in marine algae.

Nymark M, Sharma AK, Sparstad T, Bones AM, Winge P.

Sci Rep. 2016 Apr 25;6:24951. doi: 10.1038/srep24951.


Editorial: Physiology and Cellular Mechanisms of Isothiocyanates and Other Glucosinolate Degradation Products in Plants.

Bones AM, Hara M, Rossiter JT, Kissen R.

Front Plant Sci. 2015 Dec 9;6:1105. doi: 10.3389/fpls.2015.01105. eCollection 2015. No abstract available.


Allyl Isothiocyanate Inhibits Actin-Dependent Intracellular Transport in Arabidopsis thaliana.

Sporsheim B, Øverby A, Bones AM.

Int J Mol Sci. 2015 Dec 7;16(12):29134-47. doi: 10.3390/ijms161226154.


Transcriptional regulatory networks in Arabidopsis thaliana during single and combined stresses.

Barah P, B N MN, Jayavelu ND, Sowdhamini R, Shameer K, Bones AM.

Nucleic Acids Res. 2016 Apr 20;44(7):3147-64. doi: 10.1093/nar/gkv1463. Epub 2015 Dec 17.


Integrative "omic" analysis reveals distinctive cold responses in leaves and roots of strawberry, Fragaria × ananassa 'Korona'.

Koehler G, Rohloff J, Wilson RC, Kopka J, Erban A, Winge P, Bones AM, Davik J, Alsheikh MK, Randall SK.

Front Plant Sci. 2015 Oct 15;6:826. doi: 10.3389/fpls.2015.00826. eCollection 2015.


Gene regulation of lipid and phospholipid metabolism in Atlantic cod (Gadus morhua) larvae.

Li K, Østensen MA, Attramadal K, Winge P, Sparstad T, Bones AM, Vadstein O, Kjørsvik E, Olsen Y.

Comp Biochem Physiol B Biochem Mol Biol. 2015 Dec;190:16-26. doi: 10.1016/j.cbpb.2015.08.006. Epub 2015 Aug 23.


Whole-cell response to nitrogen deprivation in the diatom Phaeodactylum tricornutum.

Alipanah L, Rohloff J, Winge P, Bones AM, Brembu T.

J Exp Bot. 2015 Oct;66(20):6281-96. doi: 10.1093/jxb/erv340. Epub 2015 Jul 10.


The IDA/IDA-LIKE and PIP/PIP-LIKE gene families in Arabidopsis: phylogenetic relationship, expression patterns, and transcriptional effect of the PIPL3 peptide.

Vie AK, Najafi J, Liu B, Winge P, Butenko MA, Hornslien KS, Kumpf R, Aalen RB, Bones AM, Brembu T.

J Exp Bot. 2015 Aug;66(17):5351-65. doi: 10.1093/jxb/erv285. Epub 2015 Jun 10.


Allyl isothiocyanate affects the cell cycle of Arabidopsis thaliana.

Åsberg SE, Bones AM, Øverby A.

Front Plant Sci. 2015 May 19;6:364. doi: 10.3389/fpls.2015.00364. eCollection 2015.


Allyl isothiocyanate depletes glutathione and upregulates expression of glutathione S-transferases in Arabidopsis thaliana.

Øverby A, Stokland RA, Åsberg SE, Sporsheim B, Bones AM.

Front Plant Sci. 2015 Apr 22;6:277. doi: 10.3389/fpls.2015.00277. eCollection 2015.


Disintegration of microtubules in Arabidopsis thaliana and bladder cancer cells by isothiocyanates.

Øverby A, Bævre MS, Thangstad OP, Bones AM.

Front Plant Sci. 2015 Jan 22;6:6. doi: 10.3389/fpls.2015.00006. eCollection 2015.


Plant defence responses in oilseed rape MINELESS plants after attack by the cabbage moth Mamestra brassicae.

Ahuja I, van Dam NM, Winge P, Trælnes M, Heydarova A, Rohloff J, Langaas M, Bones AM.

J Exp Bot. 2015 Feb;66(2):579-92. doi: 10.1093/jxb/eru490. Epub 2015 Jan 6.


Multidimensional approaches for studying plant defence against insects: from ecology to omics and synthetic biology.

Barah P, Bones AM.

J Exp Bot. 2015 Feb;66(2):479-93. doi: 10.1093/jxb/eru489. Epub 2014 Dec 22. Review.


Naturally occurring phenethyl isothiocyanate-induced inhibition of gastric cancer cell growth by disruption of microtubules.

Øverby A, Zhao CM, Bones AM, Chen D.

J Gastroenterol Hepatol. 2014 Dec;29 Suppl 4:99-106. doi: 10.1111/jgh.12732.


System responses to equal doses of photosynthetically usable radiation of blue, green, and red light in the marine diatom Phaeodactylum tricornutum.

Valle KC, Nymark M, Aamot I, Hancke K, Winge P, Andresen K, Johnsen G, Brembu T, Bones AM.

PLoS One. 2014 Dec 3;9(12):e114211. doi: 10.1371/journal.pone.0114211. eCollection 2014.


Genome scale transcriptional response diversity among ten ecotypes of Arabidopsis thaliana during heat stress.

Barah P, Jayavelu ND, Mundy J, Bones AM.

Front Plant Sci. 2013 Dec 26;4:532. doi: 10.3389/fpls.2013.00532. eCollection 2013.


The chloroplast genome of the diatom Seminavis robusta: new features introduced through multiple mechanisms of horizontal gene transfer.

Brembu T, Winge P, Tooming-Klunderud A, Nederbragt AJ, Jakobsen KS, Bones AM.

Mar Genomics. 2014 Aug;16:17-27. doi: 10.1016/j.margen.2013.12.002. Epub 2013 Dec 21.


Pathways of lipid metabolism in marine algae, co-expression network, bottlenecks and candidate genes for enhanced production of EPA and DHA in species of Chromista.

Mühlroth A, Li K, Røkke G, Winge P, Olsen Y, Hohmann-Marriott MF, Vadstein O, Bones AM.

Mar Drugs. 2013 Nov 22;11(11):4662-97. doi: 10.3390/md11114662. Review.


Genome-scale cold stress response regulatory networks in ten Arabidopsis thaliana ecotypes.

Barah P, Jayavelu ND, Rasmussen S, Nielsen HB, Mundy J, Bones AM.

BMC Genomics. 2013 Oct 22;14:722. doi: 10.1186/1471-2164-14-722.


NEVERSHED and INFLORESCENCE DEFICIENT IN ABSCISSION are differentially required for cell expansion and cell separation during floral organ abscission in Arabidopsis thaliana.

Liu B, Butenko MA, Shi CL, Bolivar JL, Winge P, Stenvik GE, Vie AK, Leslie ME, Brembu T, Kristiansen W, Bones AM, Patterson SE, Liljegren SJ, Aalen RB.

J Exp Bot. 2013 Dec;64(17):5345-57. doi: 10.1093/jxb/ert232. Epub 2013 Aug 20.


Molecular signatures in Arabidopsis thaliana in response to insect attack and bacterial infection.

Barah P, Winge P, Kusnierczyk A, Tran DH, Bones AM.

PLoS One. 2013;8(3):e58987. doi: 10.1371/journal.pone.0058987. Epub 2013 Mar 25.


Molecular and photosynthetic responses to prolonged darkness and subsequent acclimation to re-illumination in the diatom Phaeodactylum tricornutum.

Nymark M, Valle KC, Hancke K, Winge P, Andresen K, Johnsen G, Bones AM, Brembu T.

PLoS One. 2013;8(3):e58722. doi: 10.1371/journal.pone.0058722. Epub 2013 Mar 8.


Transcriptome responses to combinations of stresses in Arabidopsis.

Rasmussen S, Barah P, Suarez-Rodriguez MC, Bressendorff S, Friis P, Costantino P, Bones AM, Nielsen HB, Mundy J.

Plant Physiol. 2013 Apr;161(4):1783-94. doi: 10.1104/pp.112.210773. Epub 2013 Feb 27.


Gene regulation of Atlantic cod (Gadus morhua) larvae with focus on lipid digestion and phospholipid metabolism.

Li K, Østensen MA, Attramadal K, Winge P, Sparstad T, Bakke I, Bones AM, Vadstein O, Kjørsvik E, Olsen Y.

Commun Agric Appl Biol Sci. 2013;78(4):241-4. No abstract available.


Gene regulation of carbon fixation, storage, and utilization in the diatom Phaeodactylum tricornutum acclimated to light/dark cycles.

Chauton MS, Winge P, Brembu T, Vadstein O, Bones AM.

Plant Physiol. 2013 Feb;161(2):1034-48. doi: 10.1104/pp.112.206177. Epub 2012 Dec 3.


'Myrosin cells' are not a prerequisite for aphid feeding on oilseed rape (Brassica napus) but affect host plant preferences.

Borgen BH, Ahuja I, Thangstad OP, Honne BI, Rohloff J, Rossiter JT, Bones AM.

Plant Biol (Stuttg). 2012 Nov;14(6):894-904. doi: 10.1111/j.1438-8677.2012.00578.x. Epub 2012 Jun 5.


Metabolite profiling reveals novel multi-level cold responses in the diploid model Fragaria vesca (woodland strawberry).

Rohloff J, Kopka J, Erban A, Winge P, Wilson RC, Bones AM, Davik J, Randall SK, Alsheikh MK.

Phytochemistry. 2012 May;77:99-109. doi: 10.1016/j.phytochem.2012.01.024. Epub 2012 Feb 25.


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