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Items: 18

1.

Cross-Species Single-Cell Analysis of Pancreatic Ductal Adenocarcinoma Reveals Antigen-Presenting Cancer-Associated Fibroblasts.

Elyada E, Bolisetty M, Laise P, Flynn WF, Courtois ET, Burkhart RA, Teinor JA, Belleau P, Biffi G, Lucito MS, Sivajothi S, Armstrong TD, Engle DD, Yu KH, Hao Y, Wolfgang CL, Park Y, Preall J, Jaffee EM, Califano A, Robson P, Tuveson DA.

Cancer Discov. 2019 Aug;9(8):1102-1123. doi: 10.1158/2159-8290.CD-19-0094. Epub 2019 Jun 13.

PMID:
31197017
2.

The Genome of C57BL/6J "Eve", the Mother of the Laboratory Mouse Genome Reference Strain.

Sarsani VK, Raghupathy N, Fiddes IT, Armstrong J, Thibaud-Nissen F, Zinder O, Bolisetty M, Howe K, Hinerfeld D, Ruan X, Rowe L, Barter M, Ananda G, Paten B, Weinstock GM, Churchill GA, Wiles MV, Schneider VA, Srivastava A, Reinholdt LG.

G3 (Bethesda). 2019 Jun 5;9(6):1795-1805. doi: 10.1534/g3.119.400071.

3.

Single-cell transcriptomic analysis of the lateral hypothalamic area reveals molecularly distinct populations of inhibitory and excitatory neurons.

Mickelsen LE, Bolisetty M, Chimileski BR, Fujita A, Beltrami EJ, Costanzo JT, Naparstek JR, Robson P, Jackson AC.

Nat Neurosci. 2019 Apr;22(4):642-656. doi: 10.1038/s41593-019-0349-8. Epub 2019 Mar 11.

PMID:
30858605
4.

Detection of correlated hidden factors from single cell transcriptomes using Iteratively Adjusted-SVA (IA-SVA).

Lee D, Cheng A, Lawlor N, Bolisetty M, Ucar D.

Sci Rep. 2018 Nov 19;8(1):17040. doi: 10.1038/s41598-018-35365-9.

5.

Author Correction: Single cell transcriptome profiling of retinal ganglion cells identifies cellular subtypes.

Rheaume BA, Jereen A, Bolisetty M, Sajid MS, Yang Y, Renna K, Sun L, Robson P, Trakhtenberg EF.

Nat Commun. 2018 Aug 7;9(1):3203. doi: 10.1038/s41467-018-05792-3.

6.

Single cell transcriptome profiling of retinal ganglion cells identifies cellular subtypes.

Rheaume BA, Jereen A, Bolisetty M, Sajid MS, Yang Y, Renna K, Sun L, Robson P, Trakhtenberg EF.

Nat Commun. 2018 Jul 17;9(1):2759. doi: 10.1038/s41467-018-05134-3. Erratum in: Nat Commun. 2018 Aug 7;9(1):3203.

7.

A Common Type 2 Diabetes Risk Variant Potentiates Activity of an Evolutionarily Conserved Islet Stretch Enhancer and Increases C2CD4A and C2CD4B Expression.

Kycia I, Wolford BN, Huyghe JR, Fuchsberger C, Vadlamudi S, Kursawe R, Welch RP, Albanus RD, Uyar A, Khetan S, Lawlor N, Bolisetty M, Mathur A, Kuusisto J, Laakso M, Ucar D, Mohlke KL, Boehnke M, Collins FS, Parker SCJ, Stitzel ML.

Am J Hum Genet. 2018 Apr 5;102(4):620-635. doi: 10.1016/j.ajhg.2018.02.020.

8.

Single-Cell Transcriptional Profiling Reveals Cellular Diversity and Intercommunication in the Mouse Heart.

Skelly DA, Squiers GT, McLellan MA, Bolisetty MT, Robson P, Rosenthal NA, Pinto AR.

Cell Rep. 2018 Jan 16;22(3):600-610. doi: 10.1016/j.celrep.2017.12.072.

9.

Single-cell transcriptomes identify human islet cell signatures and reveal cell-type-specific expression changes in type 2 diabetes.

Lawlor N, George J, Bolisetty M, Kursawe R, Sun L, Sivakamasundari V, Kycia I, Robson P, Stitzel ML.

Genome Res. 2017 Feb;27(2):208-222. doi: 10.1101/gr.212720.116. Epub 2016 Nov 18.

10.

Determining exon connectivity in complex mRNAs by nanopore sequencing.

Bolisetty MT, Rajadinakaran G, Graveley BR.

Genome Biol. 2015 Sep 30;16:204. doi: 10.1186/s13059-015-0777-z.

11.

Regulation of alternative splicing in Drosophila by 56 RNA binding proteins.

Brooks AN, Duff MO, May G, Yang L, Bolisetty M, Landolin J, Wan K, Sandler J, Booth BW, Celniker SE, Graveley BR, Brenner SE.

Genome Res. 2015 Nov;25(11):1771-80. doi: 10.1101/gr.192518.115. Epub 2015 Aug 20.

12.

Genome-wide identification of zero nucleotide recursive splicing in Drosophila.

Duff MO, Olson S, Wei X, Garrett SC, Osman A, Bolisetty M, Plocik A, Celniker SE, Graveley BR.

Nature. 2015 May 21;521(7552):376-9. doi: 10.1038/nature14475. Epub 2015 May 13.

13.

Circuitous route to transcription regulation.

Bolisetty MT, Graveley BR.

Mol Cell. 2013 Sep 26;51(6):705-6. doi: 10.1016/j.molcel.2013.09.012.

14.

Unexpected diversity and expression of avian endogenous retroviruses.

Bolisetty M, Blomberg J, Benachenhou F, Sperber G, Beemon K.

MBio. 2012 Oct 16;3(5):e00344-12. doi: 10.1128/mBio.00344-12.

15.

Splicing of internal large exons is defined by novel cis-acting sequence elements.

Bolisetty MT, Beemon KL.

Nucleic Acids Res. 2012 Oct;40(18):9244-54. doi: 10.1093/nar/gks652. Epub 2012 Jul 11.

16.

Pyrene-fluorene hybrids containing acetylene linkage as color-tunable emitting materials for organic light-emitting diodes.

Thomas KR, Kapoor N, Bolisetty MN, Jou JH, Chen YL, Jou YC.

J Org Chem. 2012 Apr 20;77(8):3921-32. doi: 10.1021/jo300285v. Epub 2012 Apr 4.

PMID:
22443338
17.

N-(9,9-Dipropyl-9H-fluoren-2-yl)-7-(piperidin-1-yl)-2,1,3-benzothia-diazol-4-amine.

Bolisetty MN, Thomas KR, Ng SW, Tiekink ER.

Acta Crystallogr Sect E Struct Rep Online. 2012 Mar 1;68(Pt 3):o911-2. doi: 10.1107/S1600536812008239. Epub 2012 Feb 29.

18.

Reticuloendotheliosis virus strain T induces miR-155, which targets JARID2 and promotes cell survival.

Bolisetty MT, Dy G, Tam W, Beemon KL.

J Virol. 2009 Dec;83(23):12009-17. doi: 10.1128/JVI.01182-09. Epub 2009 Sep 16.

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