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Fast and accurate bacterial species identification in urine specimens using LC-MS/MS mass spectrometry and machine learning.

Roux-Dalvai F, Gotti C, Leclercq M, Hélie MC, Boissinot M, Arrey TN, Dauly C, Fournier F, Kelly I, Marcoux J, Bestman-Smith J, Bergeron MG, Droit A.

Mol Cell Proteomics. 2019 Oct 4. pii: mcp.TIR119.001559. doi: 10.1074/mcp.TIR119.001559. [Epub ahead of print]


Culture-enriched human gut microbiomes reveal core and accessory resistance genes.

Raymond F, Boissinot M, Ouameur AA, Déraspe M, Plante PL, Kpanou SR, Bérubé È, Huletsky A, Roy PH, Ouellette M, Bergeron MG, Corbeil J.

Microbiome. 2019 Apr 5;7(1):56. doi: 10.1186/s40168-019-0669-7.


Method for isolation of both lactose-fermenting and - non-fermenting Escherichia albertii strains from stool samples.

Maheux AF, Brodeur S, Bérubé È, Boudreau DK, Abed JY, Boissinot M, Bissonnette L, Bergeron MG.

J Microbiol Methods. 2018 Nov;154:134-140. doi: 10.1016/j.mimet.2018.09.008. Epub 2018 Sep 18.


Draft Genome Sequence of a Sporulating and Motile Strain of Lachnotalea glycerini Isolated from Water in Québec City, Canada.

Maheux AF, Boudreau DK, Bérubé È, Boissinot M, Raymond F, Brodeur S, Corbeil J, Isabel S, Omar RF, Bergeron MG.

Genome Announc. 2017 Oct 19;5(42). pii: e01059-17. doi: 10.1128/genomeA.01059-17.


Draft Genome Sequence of Romboutsia maritimum sp. nov. Strain CCRI-22766T, Isolated from Coastal Estuarine Mud.

Maheux AF, Boudreau DK, Bérubé È, Boissinot M, Raymond F, Brodeur S, Corbeil J, Brightwell G, Broda D, Omar RF, Bergeron MG.

Genome Announc. 2017 Oct 12;5(41). pii: e01044-17. doi: 10.1128/genomeA.01044-17.


Draft Genome Sequence of Romboutsia weinsteinii sp. nov. Strain CCRI-19649T Isolated from Surface Water.

Maheux AF, Boudreau DK, Bérubé È, Boissinot M, Cantin P, Raymond F, Corbeil J, Omar RF, Bergeron MG.

Genome Announc. 2017 Oct 5;5(40). pii: e00901-17. doi: 10.1128/genomeA.00901-17.


Empowerment of Women: Closing the Medical Technologies Gender Gap.

Omar RF, Guilbert E, Gallo MF, Leboeuf M, Boissinot M, Sellam A, Trottier S, Kobinger G, Bergeron MG.

J Obstet Gynaecol Can. 2018 Jan;40(1):78-83. doi: 10.1016/j.jogc.2017.07.009. Epub 2017 Sep 12. No abstract available.


Use of phylogenetical analysis to predict susceptibility of pathogenic Candida spp. to antifungal drugs.

Maheux AF, Sellam A, Piché Y, Boissinot M, Pelletier R, Boudreau DK, Picard FJ, Trépanier H, Boily MJ, Ouellette M, Roy PH, Bergeron MG.

J Microbiol Methods. 2016 Dec;131:51-60. doi: 10.1016/j.mimet.2016.09.020. Epub 2016 Oct 3.


Draft Genome Sequence of Criibacterium bergeronii gen. nov., sp. nov., Strain CCRI-22567T, Isolated from a Vaginal Sample from a Woman with Bacterial Vaginosis.

Maheux AF, Bérubé È, Boudreau DK, Raymond F, Corbeil J, Roy PH, Boissinot M, Omar RF.

Genome Announc. 2016 Sep 1;4(5). pii: e00959-16. doi: 10.1128/genomeA.00959-16.


Partial recovery of microbiomes after antibiotic treatment.

Raymond F, Déraspe M, Boissinot M, Bergeron MG, Corbeil J.

Gut Microbes. 2016 Sep 2;7(5):428-34. doi: 10.1080/19490976.2016.1216747. Epub 2016 Aug 5.


Recombinase Polymerase Amplification for Diagnostic Applications.

Daher RK, Stewart G, Boissinot M, Bergeron MG.

Clin Chem. 2016 Jul;62(7):947-58. doi: 10.1373/clinchem.2015.245829. Epub 2016 May 9. Review.


Michel G Bergeron "MGB" - a true success.

Omar RF, Boissinot M, Giguère C, Trottier S, Beauchamp D, Lambert B, Vincent CB.

Can J Infect Dis Med Microbiol. 2015 Nov-Dec;26(6):287-8. No abstract available.


Cost-effectiveness analysis of antiviral treatment in the management of seasonal influenza A: point-of-care rapid test versus clinical judgment.

Nshimyumukiza L, Douville X, Fournier D, Duplantie J, Daher RK, Charlebois I, Longtin J, Papenburg J, Guay M, Boissinot M, Bergeron MG, Boudreau D, Gagné C, Rousseau F, Reinharz D.

Influenza Other Respir Viruses. 2016 Mar;10(2):113-21. doi: 10.1111/irv.12359. Epub 2016 Jan 29.


The initial state of the human gut microbiome determines its reshaping by antibiotics.

Raymond F, Ouameur AA, Déraspe M, Iqbal N, Gingras H, Dridi B, Leprohon P, Plante PL, Giroux R, Bérubé È, Frenette J, Boudreau DK, Simard JL, Chabot I, Domingo MC, Trottier S, Boissinot M, Huletsky A, Roy PH, Ouellette M, Bergeron MG, Corbeil J.

ISME J. 2016 Mar;10(3):707-20. doi: 10.1038/ismej.2015.148. Epub 2015 Sep 11.


Erratum for Maheux et al., Abilities of the mCP Agar Method and CRENAME Alpha Toxin-Specific Real-Time PCR Assay To Detect Clostridium perfringens Spores in Drinking Water.

Maheux AF, Bérubé È, Boudreau DK, Villéger R, Cantin P, Boissinot M, Bissonnette L, Bergeron MG.

Appl Environ Microbiol. 2014 Dec;80(23):7443. doi: 10.1128/AEM.03147-14. No abstract available.


Prediction of clinical outcome in glioblastoma using a biologically relevant nine-microRNA signature.

Hayes J, Thygesen H, Tumilson C, Droop A, Boissinot M, Hughes TA, Westhead D, Alder JE, Shaw L, Short SC, Lawler SE.

Mol Oncol. 2015 Mar;9(3):704-14. doi: 10.1016/j.molonc.2014.11.004. Epub 2014 Nov 28.


Structured oligonucleotides for target indexing to allow single-vessel PCR amplification and solid support microarray hybridization.

Girard LD, Boissinot K, Peytavi R, Boissinot M, Bergeron MG.

Analyst. 2015 Feb 7;140(3):912-21. doi: 10.1039/c4an01352b.


Influence of sequence mismatches on the specificity of recombinase polymerase amplification technology.

Daher RK, Stewart G, Boissinot M, Boudreau DK, Bergeron MG.

Mol Cell Probes. 2015 Apr;29(2):116-21. doi: 10.1016/j.mcp.2014.11.005. Epub 2014 Dec 4.


The Hepatocyte Growth Factor (HGF)/Met Axis: A Neglected Target in the Treatment of Chronic Myeloproliferative Neoplasms?

Boissinot M, Vilaine M, Hermouet S.

Cancers (Basel). 2014 Aug 12;6(3):1631-69. doi: 10.3390/cancers6031631. Review.


Autoantibodies to posttranslational modifications in rheumatoid arthritis.

Burska AN, Hunt L, Boissinot M, Strollo R, Ryan BJ, Vital E, Nissim A, Winyard PG, Emery P, Ponchel F.

Mediators Inflamm. 2014;2014:492873. doi: 10.1155/2014/492873. Epub 2014 Mar 23. Review.


Cytokines as biomarkers in rheumatoid arthritis.

Burska A, Boissinot M, Ponchel F.

Mediators Inflamm. 2014;2014:545493. doi: 10.1155/2014/545493. Epub 2014 Mar 9. Review.


A multi-centre phase 2 study of azacitidine in chronic myelomonocytic leukaemia.

Drummond MW, Pocock C, Boissinot M, Mills J, Brown J, Cauchy P, Cross NC, Hartley S, Kell J, Szubert A, Cockerill PN, Bowen DT.

Leukemia. 2014 Jul;28(7):1570-2. doi: 10.1038/leu.2014.85. Epub 2014 Feb 26. No abstract available.


Isothermal recombinase polymerase amplification assay applied to the detection of group B streptococci in vaginal/anal samples.

Daher RK, Stewart G, Boissinot M, Bergeron MG.

Clin Chem. 2014 Apr;60(4):660-6. doi: 10.1373/clinchem.2013.213504. Epub 2014 Jan 24.


Abilities of the mCP Agar method and CRENAME alpha toxin-specific real-time PCR assay to detect Clostridium perfringens spores in drinking water.

Maheux AF, Bérubé E, Boudreau DK, Villéger R, Cantin P, Boissinot M, Bissonnette L, Bergeron MG.

Appl Environ Microbiol. 2013 Dec;79(24):7654-61. doi: 10.1128/AEM.02791-13. Epub 2013 Sep 27. Erratum in: Appl Environ Microbiol. 2014 Dec;80(23):7443.


An immunological biomarker to predict MTX response in early RA.

Ponchel F, Goëb V, Parmar R, El-Sherbiny Y, Boissinot M, El Jawhari J, Burska A, Vital EM, Harrison S, Conaghan PG, Hensor E, Emery P.

Ann Rheum Dis. 2014 Nov;73(11):2047-53. doi: 10.1136/annrheumdis-2013-203566. Epub 2013 Aug 29.


Impact of DNA sequence and oligonucleotide length on a polythiophene-based fluorescent DNA biosensor.

Charlebois I, Gravel C, Arrad N, Boissinot M, Bergeron MG, Leclerc M.

Macromol Biosci. 2013 Jun;13(6):717-22. doi: 10.1002/mabi.201200469. Epub 2013 Mar 19.


Identification of thermophilic bacterial strains producing thermotolerant hydrolytic enzymes from manure compost.

Charbonneau DM, Meddeb-Mouelhi F, Boissinot M, Sirois M, Beauregard M.

Indian J Microbiol. 2012 Mar;52(1):41-7. doi: 10.1007/s12088-011-0156-8. Epub 2011 Feb 3.


Comparative analysis of classical and molecular microbiology methods for the detection of Escherichia coli and Enterococcus spp. in well water.

Maheux AF, Huppé V, Bissonnette L, Boissinot M, Rodrigue L, Bérubé È, Bergeron MG.

J Environ Monit. 2012 Nov;14(11):2983-9. doi: 10.1039/c2em30565h.


Induction of differentiation and apoptosis in leukaemic cell lines by the novel benzamide family histone deacetylase 2 and 3 inhibitor MI-192.

Boissinot M, Inman M, Hempshall A, James SR, Gill JH, Selby P, Bowen DT, Grigg R, Cockerill PN.

Leuk Res. 2012 Oct;36(10):1304-10. doi: 10.1016/j.leukres.2012.07.002. Epub 2012 Jul 20.


Rapid filtration separation-based sample preparation method for Bacillus spores in powdery and environmental matrices.

Isabel S, Boissinot M, Charlebois I, Fauvel CM, Shi LE, Lévesque JC, Paquin AT, Bastien M, Stewart G, Leblanc E, Sato S, Bergeron MG.

Appl Environ Microbiol. 2012 Mar;78(5):1505-12. doi: 10.1128/AEM.06696-11. Epub 2011 Dec 30.


Development of a real-time PCR assay for the specific detection and identification of Streptococcus pseudopneumoniae using the recA gene.

Sistek V, Boissinot M, Boudreau DK, Huletsky A, Picard FJ, Bergeron MG.

Clin Microbiol Infect. 2012 Nov;18(11):1089-96. doi: 10.1111/j.1469-0691.2011.03684.x. Epub 2011 Oct 25.


The development of a silica nanoparticle-based label-free DNA biosensor.

Kell AJ, Pagé L, Tan S, Charlebois I, Boissinot M, Leclerc M, Simard B.

Nanoscale. 2011 Sep 1;3(9):3747-54. doi: 10.1039/c1nr10435g. Epub 2011 Jul 26.


Enterococcus ureasiticus sp. nov. and Enterococcus quebecensis sp. nov., isolated from water.

Sistek V, Maheux AF, Boissinot M, Bernard KA, Cantin P, Cleenwerck I, De Vos P, Bergeron MG.

Int J Syst Evol Microbiol. 2012 Jun;62(Pt 6):1314-20. doi: 10.1099/ijs.0.029033-0. Epub 2011 Jul 25.


Rapid concentration and molecular enrichment approach for sensitive detection of Escherichia coli and Shigella species in potable water samples.

Maheux AF, Bissonnette L, Boissinot M, Bernier JL, Huppé V, Picard FJ, Bérubé É, Bergeron MG.

Appl Environ Microbiol. 2011 Sep;77(17):6199-207. doi: 10.1128/AEM.02337-10. Epub 2011 Jul 15.


Ability of three DNA-based assays to identify presumptive Escherichia coli colonies isolated from water by the culture-based mFC agar method.

Maheux AF, Bérubé E, Boudreau DK, Cantin P, Boissinot M, Bissonnette L, Rodrigue L, Bergeron MG.

Water Res. 2011 Apr;45(8):2638-46. doi: 10.1016/j.watres.2011.02.021. Epub 2011 Feb 22.


Method for rapid and sensitive detection of Enterococcus sp. and Enterococcus faecalis/faecium cells in potable water samples.

Maheux AF, Bissonnette L, Boissinot M, Bernier JL, Huppé V, Bérubé E, Boudreau DK, Picard FJ, Huletsky A, Bergeron MG.

Water Res. 2011 Mar;45(6):2342-54. doi: 10.1016/j.watres.2011.01.019. Epub 2011 Feb 1.


Anti-inflammatory cytokines hepatocyte growth factor and interleukin-11 are over-expressed in Polycythemia vera and contribute to the growth of clonal erythroblasts independently of JAK2V617F.

Boissinot M, Cleyrat C, Vilaine M, Jacques Y, Corre I, Hermouet S.

Oncogene. 2011 Feb 24;30(8):990-1001. doi: 10.1038/onc.2010.479. Epub 2010 Nov 1.


Toward Automatic Label-Free Whispering Gallery Modes Biodetection with a Quantum Dot-Coated Microsphere Population.

Charlebois M, Paquet A, Verret LS, Boissinot K, Boissinot M, Bergeron MG, Allen CN.

Nanoscale Res Lett. 2010 Feb 20;5(3):524-532.


JAK2 mutation and disease phenotype: a double L611V/V617F in cis mutation of JAK2 is associated with isolated erythrocytosis and increased activation of AKT and ERK1/2 rather than STAT5.

Cleyrat C, Jelinek J, Girodon F, Boissinot M, Ponge T, Harousseau JL, Issa JP, Hermouet S.

Leukemia. 2010 May;24(5):1069-73. doi: 10.1038/leu.2010.23. Epub 2010 Feb 25. No abstract available.


The human IL-3/granulocyte-macrophage colony-stimulating factor locus is epigenetically silent in immature thymocytes and is progressively activated during T cell development.

Mirabella F, Baxter EW, Boissinot M, James SR, Cockerill PN.

J Immunol. 2010 Mar 15;184(6):3043-54. doi: 10.4049/jimmunol.0901364. Epub 2010 Feb 10.


Analytical limits of three beta-glucosidase-based commercial culture methods used in environmental microbiology, to detect enterococci.

Maheux AF, Picard FJ, Boissinot M, Huppé V, Bissonnette L, Bernier JL, Cantin P, Huletsky A, Bergeron MG.

Water Sci Technol. 2009;60(4):943-55. doi: 10.2166/wst.2009.428.


Analytical comparison of nine PCR primer sets designed to detect the presence of Escherichia coli/Shigella in water samples.

Maheux AF, Picard FJ, Boissinot M, Bissonnette L, Paradis S, Bergeron MG.

Water Res. 2009 Jul;43(12):3019-28. doi: 10.1016/j.watres.2009.04.017. Epub 2009 Apr 23.


Clostridium lavalense sp. nov., a glycopeptide-resistant species isolated from human faeces.

Domingo MC, Huletsky A, Boissinot M, Hélie MC, Bernal A, Bernard KA, Grayson ML, Picard FJ, Bergeron MG.

Int J Syst Evol Microbiol. 2009 Mar;59(Pt 3):498-503. doi: 10.1099/ijs.0.001958-0.


Vancomycin-modified nanoparticles for efficient targeting and preconcentration of Gram-positive and Gram-negative bacteria.

Kell AJ, Stewart G, Ryan S, Peytavi R, Boissinot M, Huletsky A, Bergeron MG, Simard B.

ACS Nano. 2008 Sep 23;2(9):1777-88. doi: 10.1021/nn700183g.


Internal control for nucleic acid testing based on the use of purified Bacillus atrophaeus subsp. globigii spores.

Picard FJ, Gagnon M, Bernier MR, Parham NJ, Bastien M, Boissinot M, Peytavi R, Bergeron MG.

J Clin Microbiol. 2009 Mar;47(3):751-7. doi: 10.1128/JCM.01746-08. Epub 2009 Jan 14.


Divergence among genes encoding the elongation factor Tu of Yersinia Species.

Isabel S, Leblanc E, Boissinot M, Boudreau DK, Grondin M, Picard FJ, Martel EA, Parham NJ, Chain PS, Bader DE, Mulvey MR, Bryden L, Roy PH, Ouellette M, Bergeron MG.

J Bacteriol. 2008 Nov;190(22):7548-58. doi: 10.1128/JB.01067-08. Epub 2008 Sep 12.


Subcutaneous injection of Mycobacterium ulcerans causes necrosis, chronic inflammatory response and fibrosis in skeletal muscle.

Houngbédji MG, Boissinot M, Bergeron GM, Frenette J.

Microbes Infect. 2008 Oct;10(12-13):1236-43. doi: 10.1016/j.micinf.2008.07.041. Epub 2008 Aug 13.


Analytical limits of four beta-glucuronidase and beta-galactosidase-based commercial culture methods used to detect Escherichia coli and total coliforms.

Maheux AF, Huppé V, Boissinot M, Picard FJ, Bissonnette L, Bernier JL, Bergeron MG.

J Microbiol Methods. 2008 Dec;75(3):506-14. doi: 10.1016/j.mimet.2008.08.001. Epub 2008 Aug 8.


Ruminococcus gauvreauii sp. nov., a glycopeptide-resistant species isolated from a human faecal specimen.

Domingo MC, Huletsky A, Boissinot M, Bernard KA, Picard FJ, Bergeron MG.

Int J Syst Evol Microbiol. 2008 Jun;58(Pt 6):1393-7. doi: 10.1099/ijs.0.65259-0.


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