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Items: 32

1.

Debugging diversity - a pan-continental exploration of the potential of terrestrial blood-feeding leeches as a vertebrate monitoring tool.

Schnell IB, Bohmann K, Schultze SE, Richter SR, Murray DC, Sinding MS, Bass D, Cadle JE, Campbell MJ, Dolch R, Edwards DP, Gray TNE, Hansen T, Hoa ANQ, Noer CL, Heise-Pavlov S, Sander Pedersen AF, Ramamonjisoa JC, Siddall ME, Tilker A, Traeholt C, Wilkinson N, Woodcock P, Yu DW, Bertelsen MF, Bunce M, Gilbert MTP.

Mol Ecol Resour. 2018 Jun 7. doi: 10.1111/1755-0998.12912. [Epub ahead of print]

PMID:
29877042
2.

Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure.

Bohmann K, Gopalakrishnan S, Nielsen M, Nielsen LDSB, Jones G, Streicker DG, Gilbert MTP.

Mol Ecol Resour. 2018 Apr 19. doi: 10.1111/1755-0998.12891. [Epub ahead of print]

PMID:
29673092
3.

Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat.

Zepeda Mendoza ML, Xiong Z, Escalera-Zamudio M, Runge AK, Thézé J, Streicker D, Frank HK, Loza-Rubio E, Liu S, Ryder OA, Samaniego Castruita JA, Katzourakis A, Pacheco G, Taboada B, Löber U, Pybus OG, Li Y, Rojas-Anaya E, Bohmann K, Carmona Baez A, Arias CF, Liu S, Greenwood AD, Bertelsen MF, White NE, Bunce M, Zhang G, Sicheritz-Pontén T, Gilbert MPT.

Nat Ecol Evol. 2018 Apr;2(4):659-668. doi: 10.1038/s41559-018-0476-8. Epub 2018 Feb 19.

PMID:
29459707
4.

Connecting Earth observation to high-throughput biodiversity data.

Bush A, Sollmann R, Wilting A, Bohmann K, Cole B, Balzter H, Martius C, Zlinszky A, Calvignac-Spencer S, Cobbold CA, Dawson TP, Emerson BC, Ferrier S, Gilbert MTP, Herold M, Jones L, Leendertz FH, Matthews L, Millington JDA, Olson JR, Ovaskainen O, Raffaelli D, Reeve R, Rödel MO, Rodgers TW, Snape S, Visseren-Hamakers I, Vogler AP, White PCL, Wooster MJ, Yu DW.

Nat Ecol Evol. 2017 Jun 22;1(7):176. doi: 10.1038/s41559-017-0176.

5.

Do Vertebrate Gut Metagenomes Confer Rapid Ecological Adaptation?

Alberdi A, Aizpurua O, Bohmann K, Zepeda-Mendoza ML, Gilbert MTP.

Trends Ecol Evol. 2016 Sep;31(9):689-699. doi: 10.1016/j.tree.2016.06.008. Epub 2016 Jul 21. Review.

PMID:
27453351
6.

DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses.

Zepeda-Mendoza ML, Bohmann K, Carmona Baez A, Gilbert MT.

BMC Res Notes. 2016 May 3;9:255. doi: 10.1186/s13104-016-2064-9.

7.

Tag jumps illuminated--reducing sequence-to-sample misidentifications in metabarcoding studies.

Schnell IB, Bohmann K, Gilbert MT.

Mol Ecol Resour. 2015 Nov;15(6):1289-303. doi: 10.1111/1755-0998.12402. Epub 2015 Mar 20.

PMID:
25740652
8.

Ancient and modern environmental DNA.

Pedersen MW, Overballe-Petersen S, Ermini L, Sarkissian CD, Haile J, Hellstrom M, Spens J, Thomsen PF, Bohmann K, Cappellini E, Schnell IB, Wales NA, Carøe C, Campos PF, Schmidt AM, Gilbert MT, Hansen AJ, Orlando L, Willerslev E.

Philos Trans R Soc Lond B Biol Sci. 2015 Jan 19;370(1660):20130383. doi: 10.1098/rstb.2013.0383. Review.

9.

Preanalytical variables and performance of diagnostic RNA-based gene expression analysis in breast cancer.

Poremba C, Uhlendorff J, Pfitzner BM, Hennig G, Bohmann K, Bojar H, Krenn V, Brase JC, Haufe F, Averdick M, Dietel M, Kronenwett R, Denkert C.

Virchows Arch. 2014 Oct;465(4):409-17. doi: 10.1007/s00428-014-1652-0. Epub 2014 Sep 14.

10.

Second generation sequencing and morphological faecal analysis reveal unexpected foraging behaviour by Myotis nattereri (Chiroptera, Vespertilionidae) in winter.

Hope PR, Bohmann K, Gilbert MTP, Zepeda-Mendoza ML, Razgour O, Jones G.

Front Zool. 2014 May 9;11:39. doi: 10.1186/1742-9994-11-39. eCollection 2014.

11.

Environmental DNA for wildlife biology and biodiversity monitoring.

Bohmann K, Evans A, Gilbert MT, Carvalho GR, Creer S, Knapp M, Yu DW, de Bruyn M.

Trends Ecol Evol. 2014 Jun;29(6):358-67. doi: 10.1016/j.tree.2014.04.003. Epub 2014 May 10. Review. Erratum in: Trends Ecol Evol. 2014 Aug;29(8):485.

PMID:
24821515
12.

When bugs reveal biodiversity.

Bohmann K, Schnell IB, Gilbert M.

Mol Ecol. 2013 Feb;22(4):909-11.

PMID:
23476936
13.

Decentral gene expression analysis: analytical validation of the Endopredict genomic multianalyte breast cancer prognosis test.

Kronenwett R, Bohmann K, Prinzler J, Sinn BV, Haufe F, Roth C, Averdick M, Ropers T, Windbergs C, Brase JC, Weber KE, Fisch K, Müller BM, Schmidt M, Filipits M, Dubsky P, Petry C, Dietel M, Denkert C.

BMC Cancer. 2012 Oct 5;12:456. doi: 10.1186/1471-2407-12-456.

14.

Gene-expression signature of tumor recurrence in patients with stage II and III colon cancer treated with 5'fluoruracil-based adjuvant chemotherapy.

Giráldez MD, Lozano JJ, Cuatrecasas M, Alonso-Espinaco V, Maurel J, Mármol M, Hörndler C, Ortego J, Alonso V, Escudero P, Ramírez G, Petry C, Lasalvia L, Bohmann K, Wirtz R, Mira A, Castells A.

Int J Cancer. 2013 Mar 1;132(5):1090-7. doi: 10.1002/ijc.27747. Epub 2012 Aug 12.

15.

Decentral gene expression analysis for ER+/Her2- breast cancer: results of a proficiency testing program for the EndoPredict assay.

Denkert C, Kronenwett R, Schlake W, Bohmann K, Penzel R, Weber KE, Höfler H, Lehmann U, Schirmacher P, Specht K, Rudas M, Kreipe HH, Schraml P, Schlake G, Bago-Horvath Z, Tiecke F, Varga Z, Moch H, Schmidt M, Prinzler J, Kerjaschki D, Sinn BV, Müller BM, Filipits M, Petry C, Dietel M.

Virchows Arch. 2012 Mar;460(3):251-9. doi: 10.1007/s00428-012-1204-4. Epub 2012 Feb 28.

16.

Molecular diet analysis of two african free-tailed bats (molossidae) using high throughput sequencing.

Bohmann K, Monadjem A, Lehmkuhl Noer C, Rasmussen M, Zeale MR, Clare E, Jones G, Willerslev E, Gilbert MT.

PLoS One. 2011;6(6):e21441. doi: 10.1371/journal.pone.0021441. Epub 2011 Jun 22.

17.

Quantitative determination of estrogen receptor, progesterone receptor, and HER2 mRNA in formalin-fixed paraffin-embedded tissue--a new option for predictive biomarker assessment in breast cancer.

Müller BM, Kronenwett R, Hennig G, Euting H, Weber K, Bohmann K, Weichert W, Altmann G, Roth C, Winzer KJ, Kristiansen G, Petry C, Dietel M, Denkert C.

Diagn Mol Pathol. 2011 Mar;20(1):1-10. doi: 10.1097/PDM.0b013e3181e3630c.

PMID:
21326033
18.

A high-sensitivity, medium-density, and target amplification-free planar waveguide microarray system for gene expression analysis of formalin-fixed and paraffin-embedded tissue.

Schwers S, Reifenberger E, Gehrmann M, Izmailov A, Bohmann K.

Clin Chem. 2009 Nov;55(11):1995-2003. doi: 10.1373/clinchem.2009.128215. Epub 2009 Sep 10.

19.

RNA extraction from archival formalin-fixed paraffin-embedded tissue: a comparison of manual, semiautomated, and fully automated purification methods.

Bohmann K, Hennig G, Rogel U, Poremba C, Mueller BM, Fritz P, Stoerkel S, Schaefer KL.

Clin Chem. 2009 Sep;55(9):1719-27. doi: 10.1373/clinchem.2008.122572. Epub 2009 Jul 17.

20.

Topical mitogen-activated protein kinases inhibition reduces intimal hyperplasia in arterialized vein grafts.

Gulkarov I, Bohmann K, Cinnante KM, Pirelli L, Yu PJ, Grau JB, Pintucci G, Galloway AC, Mignatti P.

J Surg Res. 2009 Jun 1;154(1):150-6. doi: 10.1016/j.jss.2008.04.025. Epub 2008 May 9.

PMID:
18805551
21.

Mechanisms of c-reactive protein up-regulation in arterialized vein grafts.

Gulkarov I, Pintucci G, Bohmann K, Saunders PC, Sullivan RF, Ferrari G, Mignatti P, Galloway AC.

Surgery. 2006 Feb;139(2):254-62.

PMID:
16455335
22.

Anti-proliferative and anti-inflammatory effects of topical MAPK inhibition in arterialized vein grafts.

Pintucci G, Saunders PC, Gulkarov I, Sharony R, Kadian-Dodov DL, Bohmann K, Baumann FG, Galloway AC, Mignatti P.

FASEB J. 2006 Feb;20(2):398-400. Epub 2005 Nov 22.

PMID:
16303874
23.

The role of annuloplasty in mitral valve repair.

Schwartz CF, Gulkarov I, Bohmann K, Colvin SB, Galloway AC.

J Cardiovasc Surg (Torino). 2004 Oct;45(5):419-25. Review.

24.

The Drosophila SHC adaptor protein is required for signaling by a subset of receptor tyrosine kinases.

Luschnig S, Krauss J, Bohmann K, Desjeux I, Nüsslein-Volhard C.

Mol Cell. 2000 Feb;5(2):231-41.

25.

Zebrafish vasa RNA but not its protein is a component of the germ plasm and segregates asymmetrically before germline specification.

Knaut H, Pelegri F, Bohmann K, Schwarz H, Nüsslein-Volhard C.

J Cell Biol. 2000 May 15;149(4):875-88.

26.

The molecular motor dynein is involved in targeting swallow and bicoid RNA to the anterior pole of Drosophila oocytes.

Schnorrer F, Bohmann K, Nüsslein-Volhard C.

Nat Cell Biol. 2000 Apr;2(4):185-90.

PMID:
10783235
27.

Inhibition of protein dephosphorylation results in the accumulation of splicing snRNPs and coiled bodies within the nucleolus.

Lyon CE, Bohmann K, Sleeman J, Lamond AI.

Exp Cell Res. 1997 Jan 10;230(1):84-93.

PMID:
9013710
28.

The dynamics of coiled bodies in the nucleus of adenovirus-infected cells.

Rebelo L, Almeida F, Ramos C, Bohmann K, Lamond AI, Carmo-Fonseca M.

Mol Biol Cell. 1996 Jul;7(7):1137-51.

29.
30.

Molecular analysis of the coiled body.

Bohmann K, Ferreira J, Santama N, Weis K, Lamond AI.

J Cell Sci Suppl. 1995;19:107-13. Review.

PMID:
8655641
31.

Determining the effect of inducible protein phosphorylation on the DNA-binding activity of transcription factors.

Papavassiliou AG, Bohmann K, Bohmann D.

Anal Biochem. 1992 Jun;203(2):302-9.

PMID:
1416026
32.

2'-O-alkyloligoribonucleotides, synthesis and applications in molecular biology.

Sproat BS, Lamond AI, Garcia RG, Beijer B, Pieles U, Douglas M, Bohmann K, Carmo-Fonseco M, Weston S, O'Loughlin S.

Nucleic Acids Symp Ser. 1991;(24):59-62.

PMID:
1841381

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