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Items: 1 to 50 of 191

1.

Population sequencing reveals clonal diversity and ancestral inbreeding in the grapevine cultivar Chardonnay.

Roach MJ, Johnson DL, Bohlmann J, van Vuuren HJJ, Jones SJM, Pretorius IS, Schmidt SA, Borneman AR.

PLoS Genet. 2018 Nov 20;14(11):e1007807. doi: 10.1371/journal.pgen.1007807. eCollection 2018 Nov.

2.

Tigmint: correcting assembly errors using linked reads from large molecules.

Jackman SD, Coombe L, Chu J, Warren RL, Vandervalk BP, Yeo S, Xue Z, Mohamadi H, Bohlmann J, Jones SJM, Birol I.

BMC Bioinformatics. 2018 Oct 26;19(1):393. doi: 10.1186/s12859-018-2425-6.

3.

Functions of stone cells and oleoresin terpenes in the conifer defense syndrome.

Whitehill JGA, Yuen MMS, Henderson H, Madilao L, Kshatriya K, Bryan J, Jaquish B, Bohlmann J.

New Phytol. 2019 Feb;221(3):1503-1517. doi: 10.1111/nph.15477. Epub 2018 Oct 23.

PMID:
30216451
4.

Contribution of isopentenyl phosphate to plant terpenoid metabolism.

Henry LK, Thomas ST, Widhalm JR, Lynch JH, Davis TC, Kessler SA, Bohlmann J, Noel JP, Dudareva N.

Nat Plants. 2018 Sep;4(9):721-729. doi: 10.1038/s41477-018-0220-z. Epub 2018 Aug 20.

PMID:
30127411
5.

Cytochromes P450 Preferentially Expressed in Antennae of the Mountain Pine Beetle.

Chiu CC, Keeling CI, Bohlmann J.

J Chem Ecol. 2018 Jul 25. doi: 10.1007/s10886-018-0999-0. [Epub ahead of print]

PMID:
30043088
6.

Discovery of UDP-Glycosyltransferases and BAHD-Acyltransferases Involved in the Biosynthesis of the Antidiabetic Plant Metabolite Montbretin A.

Irmisch S, Jo S, Roach CR, Jancsik S, Man Saint Yuen M, Madilao LL, O'Neil-Johnson M, Williams R, Withers SG, Bohlmann J.

Plant Cell. 2018 Aug;30(8):1864-1886. doi: 10.1105/tpc.18.00406. Epub 2018 Jul 2.

7.

Monoterpenyl esters in juvenile mountain pine beetle and sex-specific release of the aggregation pheromone trans-verbenol.

Chiu CC, Keeling CI, Bohlmann J.

Proc Natl Acad Sci U S A. 2018 Apr 3;115(14):3652-3657. doi: 10.1073/pnas.1722380115. Epub 2018 Mar 19.

8.

Discovery, Biosynthesis and Stress-Related Accumulation of Dolabradiene-Derived Defenses in Maize.

Mafu S, Ding Y, Murphy KM, Yaacoobi O, Addison JB, Wang Q, Shen Z, Briggs SP, Bohlmann J, Castro-Falcon G, Hughes CC, Betsiashvili M, Huffaker A, Schmelz EA, Zerbe P.

Plant Physiol. 2018 Apr;176(4):2677-2690. doi: 10.1104/pp.17.01351. Epub 2018 Feb 23.

9.

Evolution of the biosynthesis of two hydroxyacetophenones in plants.

Parent GJ, Giguère I, Mageroy M, Bohlmann J, MacKay JJ.

Plant Cell Environ. 2018 Mar;41(3):620-629. doi: 10.1111/pce.13134. Epub 2018 Jan 29.

PMID:
29314043
10.

Cell-type- and tissue-specific transcriptomes of the white spruce (Picea glauca) bark unmask fine-scale spatial patterns of constitutive and induced conifer defense.

Celedon JM, Yuen MMS, Chiang A, Henderson H, Reid KE, Bohlmann J.

Plant J. 2017 Nov;92(4):710-726. doi: 10.1111/tpj.13673. Epub 2017 Sep 28.

11.

Toxicity of Pine Monoterpenes to Mountain Pine Beetle.

Chiu CC, Keeling CI, Bohlmann J.

Sci Rep. 2017 Aug 18;7(1):8858. doi: 10.1038/s41598-017-08983-y.

12.

A Conifer UDP-Sugar Dependent Glycosyltransferase Contributes to Acetophenone Metabolism and Defense against Insects.

Mageroy MH, Jancsik S, Man Saint Yuen M, Fischer M, Withers SG, Paetz C, Schneider B, Mackay J, Bohlmann J.

Plant Physiol. 2017 Oct;175(2):641-651. doi: 10.1104/pp.17.00611. Epub 2017 Aug 9.

13.

In vivo function of Pgβglu-1 in the release of acetophenones in white spruce.

Mageroy MH, Lachance D, Jancsik S, Parent G, Séguin A, Mackay J, Bohlmann J.

PeerJ. 2017 Jul 7;5:e3535. doi: 10.7717/peerj.3535. eCollection 2017.

14.

An extended model of heartwood secondary metabolism informed by functional genomics.

Celedon JM, Bohlmann J.

Tree Physiol. 2018 Mar 1;38(3):311-319. doi: 10.1093/treephys/tpx070. Review.

PMID:
28633414
15.

Sesquiterpene Variation in West Australian Sandalwood (Santalum spicatum).

Moniodis J, Jones CG, Renton M, Plummer JA, Barbour EL, Ghisalberti EL, Bohlmann J.

Molecules. 2017 Jun 6;22(6). pii: E940. doi: 10.3390/molecules22060940.

16.

Terpene synthases from Cannabis sativa.

Booth JK, Page JE, Bohlmann J.

PLoS One. 2017 Mar 29;12(3):e0173911. doi: 10.1371/journal.pone.0173911. eCollection 2017.

17.

Biosynthesis of the microtubule-destabilizing diterpene pseudolaric acid B from golden larch involves an unusual diterpene synthase.

Mafu S, Karunanithi PS, Palazzo TA, Harrod BL, Rodriguez SM, Mollhoff IN, O'Brien TE, Tong S, Fiehn O, Tantillo DJ, Bohlmann J, Zerbe P.

Proc Natl Acad Sci U S A. 2017 Jan 31;114(5):974-979. doi: 10.1073/pnas.1612901114. Epub 2017 Jan 17.

18.

A high-resolution reference genetic map positioning 8.8 K genes for the conifer white spruce: structural genomics implications and correspondence with physical distance.

Pavy N, Lamothe M, Pelgas B, Gagnon F, Birol I, Bohlmann J, Mackay J, Isabel N, Bousquet J.

Plant J. 2017 Apr;90(1):189-203. doi: 10.1111/tpj.13478. Epub 2017 Mar 6.

19.

Biosynthesis of the psychotropic plant diterpene salvinorin A: Discovery and characterization of the Salvia divinorum clerodienyl diphosphate synthase.

Pelot KA, Mitchell R, Kwon M, Hagelthorn DM, Wardman JF, Chiang A, Bohlmann J, Ro DK, Zerbe P.

Plant J. 2017 Mar;89(5):885-897. doi: 10.1111/tpj.13427. Epub 2017 Feb 6.

20.

Assembly of the Complete Sitka Spruce Chloroplast Genome Using 10X Genomics' GemCode Sequencing Data.

Coombe L, Warren RL, Jackman SD, Yang C, Vandervalk BP, Moore RA, Pleasance S, Coope RJ, Bohlmann J, Holt RA, Jones SJ, Birol I.

PLoS One. 2016 Sep 15;11(9):e0163059. doi: 10.1371/journal.pone.0163059. eCollection 2016.

21.

Genomics-Based Discovery of Plant Genes for Synthetic Biology of Terpenoid Fragrances: A Case Study in Sandalwood oil Biosynthesis.

Celedon JM, Bohlmann J.

Methods Enzymol. 2016;576:47-67. doi: 10.1016/bs.mie.2016.03.008. Epub 2016 Apr 13.

PMID:
27480682
22.

Function of Sitka spruce stone cells as a physical defence against white pine weevil.

Whitehill JG, Henderson H, Strong W, Jaquish B, Bohlmann J.

Plant Cell Environ. 2016 Nov;39(11):2545-2556. doi: 10.1111/pce.12810. Epub 2016 Sep 19.

PMID:
27478980
23.

Gene expression analysis of overwintering mountain pine beetle larvae suggests multiple systems involved in overwintering stress, cold hardiness, and preparation for spring development.

Robert JA, Bonnett T, Pitt C, Spooner LJ, Fraser J, Yuen MM, Keeling CI, Bohlmann J, Huber DP.

PeerJ. 2016 Jul 6;4:e2109. doi: 10.7717/peerj.2109. eCollection 2016.

24.

Polymer Coatings of Cochlear Implant Electrode Surface - An Option for Improving Electrode-Nerve-Interface by Blocking Fibroblast Overgrowth.

Hadler C, Aliuos P, Brandes G, Warnecke A, Bohlmann J, Dempwolf W, Menzel H, Lenarz T, Reuter G, Wissel K.

PLoS One. 2016 Jul 8;11(7):e0157710. doi: 10.1371/journal.pone.0157710. eCollection 2016.

25.

Heartwood-specific transcriptome and metabolite signatures of tropical sandalwood (Santalum album) reveal the final step of (Z)-santalol fragrance biosynthesis.

Celedon JM, Chiang A, Yuen MM, Diaz-Chavez ML, Madilao LL, Finnegan PM, Barbour EL, Bohlmann J.

Plant J. 2016 May;86(4):289-99. doi: 10.1111/tpj.13162. Epub 2016 Apr 15.

26.

Modularity of Conifer Diterpene Resin Acid Biosynthesis: P450 Enzymes of Different CYP720B Clades Use Alternative Substrates and Converge on the Same Products.

Geisler K, Jensen NB, Yuen MM, Madilao L, Bohlmann J.

Plant Physiol. 2016 May;171(1):152-64. doi: 10.1104/pp.16.00180. Epub 2016 Mar 2.

27.

Quantitative metabolome, proteome and transcriptome analysis of midgut and fat body tissues in the mountain pine beetle, Dendroctonus ponderosae Hopkins, and insights into pheromone biosynthesis.

Keeling CI, Li M, Sandhu HK, Henderson H, Yuen MM, Bohlmann J.

Insect Biochem Mol Biol. 2016 Mar;70:170-83. doi: 10.1016/j.ibmb.2016.01.002. Epub 2016 Jan 12.

PMID:
26792242
28.

Expanding the Landscape of Diterpene Structural Diversity through Stereochemically Controlled Combinatorial Biosynthesis.

Andersen-Ranberg J, Kongstad KT, Nielsen MT, Jensen NB, Pateraki I, Bach SS, Hamberger B, Zerbe P, Staerk D, Bohlmann J, Møller BL, Hamberger B.

Angew Chem Int Ed Engl. 2016 Feb 5;55(6):2142-6. doi: 10.1002/anie.201510650. Epub 2016 Jan 8.

29.

Organellar Genomes of White Spruce (Picea glauca): Assembly and Annotation.

Jackman SD, Warren RL, Gibb EA, Vandervalk BP, Mohamadi H, Chu J, Raymond A, Pleasance S, Coope R, Wildung MR, Ritland CE, Bousquet J, Jones SJ, Bohlmann J, Birol I.

Genome Biol Evol. 2015 Dec 8;8(1):29-41. doi: 10.1093/gbe/evv244.

30.

Histology and cell wall biochemistry of stone cells in the physical defence of conifers against insects.

Whitehill JG, Henderson H, Schuetz M, Skyba O, Yuen MM, King J, Samuels AL, Mansfield SD, Bohlmann J.

Plant Cell Environ. 2016 Aug;39(8):1646-61. doi: 10.1111/pce.12654. Epub 2015 Dec 21.

PMID:
26474726
31.

Exploring diterpene metabolism in non-model species: transcriptome-enabled discovery and functional characterization of labda-7,13E-dienyl diphosphate synthase from Grindelia robusta.

Zerbe P, Rodriguez SM, Mafu S, Chiang A, Sandhu HK, O'Neil-Johnson M, Starks CM, Bohlmann J.

Plant J. 2015 Sep;83(5):783-93. doi: 10.1111/tpj.12925. Epub 2015 Jul 23.

32.

UniqTag: Content-Derived Unique and Stable Identifiers for Gene Annotation.

Jackman SD, Bohlmann J, Birol İ.

PLoS One. 2015 May 28;10(5):e0128026. doi: 10.1371/journal.pone.0128026. eCollection 2015.

33.

Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism.

Warren RL, Keeling CI, Yuen MM, Raymond A, Taylor GA, Vandervalk BP, Mohamadi H, Paulino D, Chiu R, Jackman SD, Robertson G, Yang C, Boyle B, Hoffmann M, Weigel D, Nelson DR, Ritland C, Isabel N, Jaquish B, Yanchuk A, Bousquet J, Jones SJ, MacKay J, Birol I, Bohlmann J.

Plant J. 2015 Jul;83(2):189-212. doi: 10.1111/tpj.12886. Epub 2015 Jun 19.

34.

Plant diterpene synthases: exploring modularity and metabolic diversity for bioengineering.

Zerbe P, Bohlmann J.

Trends Biotechnol. 2015 Jul;33(7):419-28. doi: 10.1016/j.tibtech.2015.04.006. Epub 2015 May 20. Review.

PMID:
26003209
35.

Enzymes for synthetic biology of ambroxide-related diterpenoid fragrance compounds.

Zerbe P, Bohlmann J.

Adv Biochem Eng Biotechnol. 2015;148:427-47. doi: 10.1007/10_2015_308. Review.

PMID:
25846965
36.

The gymnosperm cytochrome P450 CYP750B1 catalyzes stereospecific monoterpene hydroxylation of (+)-sabinene in thujone biosynthesis in western redcedar.

Gesell A, Blaukopf M, Madilao L, Yuen MM, Withers SG, Mattsson J, Russell JH, Bohlmann J.

Plant Physiol. 2015 May;168(1):94-106. doi: 10.1104/pp.15.00315. Epub 2015 Mar 31.

37.

Oleic acid metabolism via a conserved cytochrome P450 system-mediated ω-hydroxylation in the bark beetle-associated fungus Grosmannia clavigera.

Novak M, Lah L, Šala M, Stojan J, Bohlmann J, Komel R.

PLoS One. 2015 Mar 20;10(3):e0120119. doi: 10.1371/journal.pone.0120119. eCollection 2015.

38.

The transcriptome of sesquiterpenoid biosynthesis in heartwood xylem of Western Australian sandalwood (Santalum spicatum).

Moniodis J, Jones CG, Barbour EL, Plummer JA, Ghisalberti EL, Bohlmann J.

Phytochemistry. 2015 May;113:79-86. doi: 10.1016/j.phytochem.2014.12.009. Epub 2015 Jan 24.

PMID:
25624157
39.

Transcriptional responses of Arabidopsis thaliana to chewing and sucking insect herbivores.

Appel HM, Fescemyer H, Ehlting J, Weston D, Rehrig E, Joshi T, Xu D, Bohlmann J, Schultz J.

Front Plant Sci. 2014 Nov 14;5:565. doi: 10.3389/fpls.2014.00565. eCollection 2014.

40.

Proteomics indicators of the rapidly shifting physiology from whole mountain pine beetle, Dendroctonus ponderosae (Coleoptera: Curculionidae), adults during early host colonization.

Pitt C, Robert JA, Bonnett TR, Keeling CI, Bohlmann J, Huber DP.

PLoS One. 2014 Oct 31;9(10):e110673. doi: 10.1371/journal.pone.0110673. eCollection 2014.

41.

Insights into conifer giga-genomes.

De La Torre AR, Birol I, Bousquet J, Ingvarsson PK, Jansson S, Jones SJ, Keeling CI, MacKay J, Nilsson O, Ritland K, Street N, Yanchuk A, Zerbe P, Bohlmann J.

Plant Physiol. 2014 Dec;166(4):1724-32. doi: 10.1104/pp.114.248708. Epub 2014 Oct 27. Review.

42.

Expression of the β-glucosidase gene Pgβglu-1 underpins natural resistance of white spruce against spruce budworm.

Mageroy MH, Parent G, Germanos G, Giguère I, Delvas N, Maaroufi H, Bauce É, Bohlmann J, Mackay JJ.

Plant J. 2015 Jan;81(1):68-80. doi: 10.1111/tpj.12699. Epub 2014 Nov 6.

43.

Plasticity and evolution of (+)-3-carene synthase and (-)-sabinene synthase functions of a sitka spruce monoterpene synthase gene family associated with weevil resistance.

Roach CR, Hall DE, Zerbe P, Bohlmann J.

J Biol Chem. 2014 Aug 22;289(34):23859-69. doi: 10.1074/jbc.M114.571703. Epub 2014 Jul 11.

44.

Diterpene synthases of the biosynthetic system of medicinally active diterpenoids in Marrubium vulgare.

Zerbe P, Chiang A, Dullat H, O'Neil-Johnson M, Starks C, Hamberger B, Bohlmann J.

Plant J. 2014 Sep;79(6):914-27. doi: 10.1111/tpj.12589. Epub 2014 Jul 23.

45.

Professor Vincenzo de Luca.

Facchini P, Bohlmann J, Ibrahim R, Lewis NG.

Phytochemistry. 2015 May;113:7-8. doi: 10.1016/j.phytochem.2014.05.010. Epub 2014 Jun 17. No abstract available.

PMID:
24950670
46.

Gene discovery for enzymes involved in limonene modification or utilization by the mountain pine beetle-associated pathogen Grosmannia clavigera.

Wang Y, Lim L, Madilao L, Lah L, Bohlmann J, Breuil C.

Appl Environ Microbiol. 2014 Aug;80(15):4566-76.

47.

How the mountain pine beetle (Dendroctonus ponderosae) breached the Canadian Rocky Mountains.

Janes JK, Li Y, Keeling CI, Yuen MM, Boone CK, Cooke JE, Bohlmann J, Huber DP, Murray BW, Coltman DW, Sperling FA.

Mol Biol Evol. 2014 Jul;31(7):1803-15. doi: 10.1093/molbev/msu135. Epub 2014 Apr 22.

48.

Evolution of gene structure in the conifer Picea glauca: a comparative analysis of the impact of intron size.

Stival Sena J, Giguère I, Boyle B, Rigault P, Birol I, Zuccolo A, Ritland K, Ritland C, Bohlmann J, Jones S, Bousquet J, Mackay J.

BMC Plant Biol. 2014 Apr 16;14:95. doi: 10.1186/1471-2229-14-95.

49.

Comparative genomics of the pine pathogens and beetle symbionts in the genus Grosmannia.

Massoumi Alamouti S, Haridas S, Feau N, Robertson G, Bohlmann J, Breuil C.

Mol Biol Evol. 2014 Jun;31(6):1454-74. doi: 10.1093/molbev/msu102. Epub 2014 Mar 12.

PMID:
24627033
50.

Cloning and characterization of chitinases from interior spruce and lodgepole pine.

Kolosova N, Breuil C, Bohlmann J.

Phytochemistry. 2014 May;101:32-9. doi: 10.1016/j.phytochem.2014.02.006. Epub 2014 Feb 21.

PMID:
24564978

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