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Items: 40

1.

REFUGE Challenge: A unified framework for evaluating automated methods for glaucoma assessment from fundus photographs.

Orlando JI, Fu H, Barbossa Breda J, van Keer K, Bathula DR, Diaz-Pinto A, Fang R, Heng PA, Kim J, Lee J, Lee J, Li X, Liu P, Lu S, Murugesan B, Naranjo V, Phaye SSR, Shankaranarayana SM, Sikka A, Son J, van den Hengel A, Wang S, Wu J, Wu Z, Xu G, Xu Y, Yin P, Li F, Zhang X, Xu Y, Bogunović H.

Med Image Anal. 2019 Oct 8;59:101570. doi: 10.1016/j.media.2019.101570. [Epub ahead of print]

PMID:
31630011
2.

Exploiting Epistemic Uncertainty of Anatomy Segmentation for Anomaly Detection in Retinal OCT.

Seebock P, Orlando JI, Schlegl T, Waldstein SM, Bogunovic H, Klimscha S, Langs G, Schmidt-Erfurth U.

IEEE Trans Med Imaging. 2019 May 31. doi: 10.1109/TMI.2019.2919951. [Epub ahead of print]

PMID:
31170065
3.

Impact of Drusen Volume on Quantitative Fundus Autofluorescence in Early and Intermediate Age-Related Macular Degeneration.

Reiter GS, Told R, Schlanitz FG, Bogunovic H, Baumann L, Sacu S, Schmidt-Erfurth U, Pollreisz A.

Invest Ophthalmol Vis Sci. 2019 May 1;60(6):1937-1942. doi: 10.1167/iovs.19-26566.

PMID:
31050721
4.

MORPHOLOGICAL AND FUNCTIONAL CHARACTERISTICS AT THE ONSET OF EXUDATIVE CONVERSION IN AGE-RELATED MACULAR DEGENERATION.

Hu X, Waldstein SM, Klimscha S, Sadeghipour A, Bogunovic H, Gerendas BS, Osborne A, Schmidt-Erfurth U.

Retina. 2019 Mar 28. doi: 10.1097/IAE.0000000000002531. [Epub ahead of print]

PMID:
30932998
5.

RETOUCH: The Retinal OCT Fluid Detection and Segmentation Benchmark and Challenge.

Bogunovic H, Venhuizen F, Klimscha S, Apostolopoulos S, Bab-Hadiashar A, Bagci U, Beg MF, Bekalo L, Chen Q, Ciller C, Gopinath K, Gostar AK, Jeon K, Ji Z, Kang SH, Koozekanani DD, Lu D, Morley D, Parhi KK, Park HS, Rashno A, Sarunic M, Shaikh S, Sivaswamy J, Tennakoon R, Yadav S, De Zanet S, Waldstein SM, Gerendas BS, Klaver C, Sanchez CI, Schmidt-Erfurth U.

IEEE Trans Med Imaging. 2019 Aug;38(8):1858-1874. doi: 10.1109/TMI.2019.2901398. Epub 2019 Feb 26.

PMID:
30835214
6.

Author Correction: Why rankings of biomedical image analysis competitions should be interpreted with care.

Maier-Hein L, Eisenmann M, Reinke A, Onogur S, Stankovic M, Scholz P, Arbel T, Bogunovic H, Bradley AP, Carass A, Feldmann C, Frangi AF, Full PM, van Ginneken B, Hanbury A, Honauer K, Kozubek M, Landman BA, März K, Maier O, Maier-Hein K, Menze BH, Müller H, Neher PF, Niessen W, Rajpoot N, Sharp GC, Sirinukunwattana K, Speidel S, Stock C, Stoyanov D, Taha AA, van der Sommen F, Wang CW, Weber MA, Zheng G, Jannin P, Kopp-Schneider A.

Nat Commun. 2019 Jan 30;10(1):588. doi: 10.1038/s41467-019-08563-w.

7.

Why rankings of biomedical image analysis competitions should be interpreted with care.

Maier-Hein L, Eisenmann M, Reinke A, Onogur S, Stankovic M, Scholz P, Arbel T, Bogunovic H, Bradley AP, Carass A, Feldmann C, Frangi AF, Full PM, van Ginneken B, Hanbury A, Honauer K, Kozubek M, Landman BA, März K, Maier O, Maier-Hein K, Menze BH, Müller H, Neher PF, Niessen W, Rajpoot N, Sharp GC, Sirinukunwattana K, Speidel S, Stock C, Stoyanov D, Taha AA, van der Sommen F, Wang CW, Weber MA, Zheng G, Jannin P, Kopp-Schneider A.

Nat Commun. 2018 Dec 6;9(1):5217. doi: 10.1038/s41467-018-07619-7. Erratum in: Nat Commun. 2019 Jan 30;10(1):588.

8.

Unsupervised Identification of Disease Marker Candidates in Retinal OCT Imaging Data.

Seebock P, Waldstein SM, Klimscha S, Bogunovic H, Schlegl T, Gerendas BS, Donner R, Schmidt-Erfurth U, Langs G.

IEEE Trans Med Imaging. 2019 Apr;38(4):1037-1047. doi: 10.1109/TMI.2018.2877080. Epub 2018 Oct 22.

PMID:
30346281
9.

Artificial intelligence in retina.

Schmidt-Erfurth U, Sadeghipour A, Gerendas BS, Waldstein SM, Bogunović H.

Prog Retin Eye Res. 2018 Nov;67:1-29. doi: 10.1016/j.preteyeres.2018.07.004. Epub 2018 Aug 1. Review.

10.

Prediction of Individual Disease Conversion in Early AMD Using Artificial Intelligence.

Schmidt-Erfurth U, Waldstein SM, Klimscha S, Sadeghipour A, Hu X, Gerendas BS, Osborne A, Bogunovic H.

Invest Ophthalmol Vis Sci. 2018 Jul 2;59(8):3199-3208. doi: 10.1167/iovs.18-24106.

PMID:
29971444
11.

Neuroretinal atrophy following resolution of macular oedema in retinal vein occlusion.

Podkowinski D, Philip AM, Vogl WD, Gamper J, Bogunovic H, Gerendas BS, Haj Najeeb B, Waldstein SM, Schmidt-Erfurth U.

Br J Ophthalmol. 2019 Jan;103(1):36-42. doi: 10.1136/bjophthalmol-2017-311614. Epub 2018 Mar 6.

PMID:
29511062
12.

Machine Learning to Analyze the Prognostic Value of Current Imaging Biomarkers in Neovascular Age-Related Macular Degeneration.

Schmidt-Erfurth U, Bogunovic H, Sadeghipour A, Schlegl T, Langs G, Gerendas BS, Osborne A, Waldstein SM.

Ophthalmol Retina. 2018 Jan;2(1):24-30. doi: 10.1016/j.oret.2017.03.015. Epub 2017 May 31.

PMID:
31047298
13.

Fully Automated Detection and Quantification of Macular Fluid in OCT Using Deep Learning.

Schlegl T, Waldstein SM, Bogunovic H, Endstraßer F, Sadeghipour A, Philip AM, Podkowinski D, Gerendas BS, Langs G, Schmidt-Erfurth U.

Ophthalmology. 2018 Apr;125(4):549-558. doi: 10.1016/j.ophtha.2017.10.031. Epub 2017 Dec 8.

14.

Spatial Correspondence Between Intraretinal Fluid, Subretinal Fluid, and Pigment Epithelial Detachment in Neovascular Age-Related Macular Degeneration.

Klimscha S, Waldstein SM, Schlegl T, Bogunovic H, Sadeghipour A, Philip AM, Podkowinski D, Pablik E, Zhang L, Abramoff MD, Sonka M, Gerendas BS, Schmidt-Erfurth U.

Invest Ophthalmol Vis Sci. 2017 Aug 1;58(10):4039-4048. doi: 10.1167/iovs.16-20201.

PMID:
28813577
15.

Joint retinal layer and fluid segmentation in OCT scans of eyes with severe macular edema using unsupervised representation and auto-context.

Montuoro A, Waldstein SM, Gerendas BS, Schmidt-Erfurth U, Bogunović H.

Biomed Opt Express. 2017 Feb 27;8(3):1874-1888. doi: 10.1364/BOE.8.001874. eCollection 2017 Mar 1.

16.

Prediction of Anti-VEGF Treatment Requirements in Neovascular AMD Using a Machine Learning Approach.

Bogunovic H, Waldstein SM, Schlegl T, Langs G, Sadeghipour A, Liu X, Gerendas BS, Osborne A, Schmidt-Erfurth U.

Invest Ophthalmol Vis Sci. 2017 Jun 1;58(7):3240-3248. doi: 10.1167/iovs.16-21053.

PMID:
28660277
17.

Machine Learning of the Progression of Intermediate Age-Related Macular Degeneration Based on OCT Imaging.

Bogunovic H, Montuoro A, Baratsits M, Karantonis MG, Waldstein SM, Schlanitz F, Schmidt-Erfurth U.

Invest Ophthalmol Vis Sci. 2017 May 1;58(6):BIO141-BIO150. doi: 10.1167/iovs.17-21789.

PMID:
28658477
18.

Impact of B-Scan Averaging on Spectralis Optical Coherence Tomography Image Quality before and after Cataract Surgery.

Podkowinski D, Sharian Varnousfaderani E, Simader C, Bogunovic H, Philip AM, Gerendas BS, Schmidt-Erfurth U, Waldstein SM.

J Ophthalmol. 2017;2017:8148047. doi: 10.1155/2017/8148047. Epub 2017 May 23.

19.

Evaluating the impact of vitreomacular adhesion on anti-VEGF therapy for retinal vein occlusion using machine learning.

Waldstein SM, Montuoro A, Podkowinski D, Philip AM, Gerendas BS, Bogunovic H, Schmidt-Erfurth U.

Sci Rep. 2017 Jun 7;7(1):2928. doi: 10.1038/s41598-017-02971-y.

20.

Computational image analysis for prognosis determination in DME.

Gerendas BS, Bogunovic H, Sadeghipour A, Schlegl T, Langs G, Waldstein SM, Schmidt-Erfurth U.

Vision Res. 2017 Oct;139:204-210. doi: 10.1016/j.visres.2017.03.008. Epub 2017 May 9.

21.

Supervised learning and dimension reduction techniques for quantification of retinal fluid in optical coherence tomography images.

Breger A, Ehler M, Bogunovic H, Waldstein SM, Philip AM, Schmidt-Erfurth U, Gerendas BS.

Eye (Lond). 2017 Aug;31(8):1212-1220. doi: 10.1038/eye.2017.61. Epub 2017 Apr 21.

22.

A view of the current and future role of optical coherence tomography in the management of age-related macular degeneration.

Schmidt-Erfurth U, Klimscha S, Waldstein SM, Bogunović H.

Eye (Lond). 2017 Jan;31(1):26-44. doi: 10.1038/eye.2016.227. Epub 2016 Nov 25. Review.

23.

Automated Segmentability Index for Layer Segmentation of Macular SD-OCT Images.

Lee K, Buitendijk GH, Bogunovic H, Springelkamp H, Hofman A, Wahle A, Sonka M, Vingerling JR, Klaver CC, Abràmoff MD.

Transl Vis Sci Technol. 2016 Apr 5;5(2):14. eCollection 2016 Mar.

24.

Choroidal thickness maps from spectral domain and swept source optical coherence tomography: algorithmic versus ground truth annotation.

Philip AM, Gerendas BS, Zhang L, Faatz H, Podkowinski D, Bogunovic H, Abramoff MD, Hagmann M, Leitner R, Simader C, Sonka M, Waldstein SM, Schmidt-Erfurth U.

Br J Ophthalmol. 2016 Oct;100(10):1372-6. doi: 10.1136/bjophthalmol-2015-307985. Epub 2016 Jan 14.

25.

Relationships of retinal structure and humphrey 24-2 visual field thresholds in patients with glaucoma.

Bogunović H, Kwon YH, Rashid A, Lee K, Critser DB, Garvin MK, Sonka M, Abràmoff MD.

Invest Ophthalmol Vis Sci. 2014 Dec 9;56(1):259-71. doi: 10.1167/iovs.14-15885.

26.

Three-dimensional automated choroidal volume assessment on standard spectral-domain optical coherence tomography and correlation with the level of diabetic macular edema.

Gerendas BS, Waldstein SM, Simader C, Deak G, Hajnajeeb B, Zhang L, Bogunovic H, Abramoff MD, Kundi M, Sonka M, Schmidt-Erfurth U.

Am J Ophthalmol. 2014 Nov;158(5):1039-48. doi: 10.1016/j.ajo.2014.08.001. Epub 2014 Aug 12.

27.

Multi-surface and multi-field co-segmentation of 3-D retinal optical coherence tomography.

Bogunovic H, Sonka M, Kwon YH, Kemp P, Abramoff MD, Wu X.

IEEE Trans Med Imaging. 2014 Dec;33(12):2242-53. doi: 10.1109/TMI.2014.2336246. Epub 2014 Jul 9.

28.

Anatomical labeling of the Circle of Willis using maximum a posteriori probability estimation.

Bogunovic H, Pozo JM, Cárdenes R, San Román L, Frangi AF.

IEEE Trans Med Imaging. 2013 Sep;32(9):1587-99. doi: 10.1109/TMI.2013.2259595. Epub 2013 Apr 23.

PMID:
23674438
29.

AngioLab--a software tool for morphological analysis and endovascular treatment planning of intracranial aneurysms.

Larrabide I, Villa-Uriol MC, Cárdenes R, Barbarito V, Carotenuto L, Geers AJ, Morales HG, Pozo JM, Mazzeo MD, Bogunović H, Omedas P, Riccobene C, Macho JM, Frangi AF.

Comput Methods Programs Biomed. 2012 Nov;108(2):806-19. doi: 10.1016/j.cmpb.2012.05.006. Epub 2012 Jun 28.

PMID:
22749086
30.

Automated landmarking and geometric characterization of the carotid siphon.

Bogunović H, Pozo JM, Cárdenes R, Villa-Uriol MC, Blanc R, Piotin M, Frangi AF.

Med Image Anal. 2012 May;16(4):889-903. doi: 10.1016/j.media.2012.01.006. Epub 2012 Feb 8.

PMID:
22377655
31.

3D modeling of coronary artery bifurcations from CTA and conventional coronary angiography.

Cárdenes R, Díez JL, Larrabide I, Bogunović H, Frangi AF.

Med Image Comput Comput Assist Interv. 2011;14(Pt 3):395-402.

PMID:
22003724
32.

Anatomical labeling of the anterior circulation of the Circle of Willis using maximum a posteriori classification.

Bogunović H, Pozo JM, Cárdenes R, Frangi AF.

Med Image Comput Comput Assist Interv. 2011;14(Pt 3):330-7.

PMID:
22003716
33.

Automatic aneurysm neck detection using surface Voronoi diagrams.

Cárdenes R, Pozo JM, Bogunovic H, Larrabide I, Frangi AF.

IEEE Trans Med Imaging. 2011 Oct;30(10):1863-76. doi: 10.1109/TMI.2011.2157698. Epub 2011 May 27.

PMID:
21622072
34.

Automated segmentation of cerebral vasculature with aneurysms in 3DRA and TOF-MRA using geodesic active regions: an evaluation study.

Bogunović H, Pozo JM, Villa-Uriol MC, Majoie CB, van den Berg R, Gratama van Andel HA, Macho JM, Blasco J, Román LS, Frangi AF.

Med Phys. 2011 Jan;38(1):210-22.

PMID:
21361189
35.

Patient-specific computational hemodynamics of intracranial aneurysms from 3D rotational angiography and CT angiography: an in vivo reproducibility study.

Geers AJ, Larrabide I, Radaelli AG, Bogunovic H, Kim M, Gratama van Andel HA, Majoie CB, VanBavel E, Frangi AF.

AJNR Am J Neuroradiol. 2011 Mar;32(3):581-6. doi: 10.3174/ajnr.A2306. Epub 2010 Dec 23.

36.

Automatic identification of internal carotid artery from 3DRA images.

Bogunović H, Pozo JM, Cárdenes R, Frangi AF.

Conf Proc IEEE Eng Med Biol Soc. 2010;2010:5343-6. doi: 10.1109/IEMBS.2010.5626473.

PMID:
21096256
37.

AngioLab: integrated technology for patient-specific management of intracranial aneurysms.

Villa-Uriol MC, Larrabide I, Geers AJ, Pozo J, Bogunovic H, Mazzeo M, Omedas P, Barbarito V, Carotenuto L, Riccobene C, Planes X, Martelli Y, Frangi AF.

Conf Proc IEEE Eng Med Biol Soc. 2010;2010:6801-4. doi: 10.1109/IEMBS.2010.5625974.

PMID:
21095844
38.

Toward integrated management of cerebral aneurysms.

Villa-Uriol MC, Larrabide I, Pozo JM, Kim M, Camara O, De Craene M, Zhang C, Geers AJ, Morales H, Bogunović H, Cardenes R, Frangi AF.

Philos Trans A Math Phys Eng Sci. 2010 Jun 28;368(1921):2961-82. doi: 10.1098/rsta.2010.0095.

PMID:
20478916
39.

Standardized evaluation methodology and reference database for evaluating coronary artery centerline extraction algorithms.

Schaap M, Metz CT, van Walsum T, van der Giessen AG, Weustink AC, Mollet NR, Bauer C, Bogunović H, Castro C, Deng X, Dikici E, O'Donnell T, Frenay M, Friman O, Hernández Hoyos M, Kitslaar PH, Krissian K, Kühnel C, Luengo-Oroz MA, Orkisz M, Smedby O, Styner M, Szymczak A, Tek H, Wang C, Warfield SK, Zambal S, Zhang Y, Krestin GP, Niessen WJ.

Med Image Anal. 2009 Oct;13(5):701-14. doi: 10.1016/j.media.2009.06.003. Epub 2009 Jun 30.

40.

Blood flow and velocity estimation based on vessel transit time by combining 2D and 3D X-ray angiography.

Bogunović H, Loncarić S.

Med Image Comput Comput Assist Interv. 2006;9(Pt 2):117-24.

PMID:
17354763

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