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Items: 1 to 50 of 79

1.

Simulating rewetting events in intermittent rivers and ephemeral streams: A global analysis of leached nutrients and organic matter.

Shumilova O, Zak D, Datry T, von Schiller D, Corti R, Foulquier A, Obrador B, Tockner K, Allan DC, Altermatt F, Arce MI, Arnon S, Banas D, Banegas-Medina A, Beller E, Blanchette ML, Blanco-Libreros JF, Blessing J, Boëchat IG, Boersma K, Bogan MT, Bonada N, Bond NR, Brintrup K, Bruder A, Burrows R, Cancellario T, Carlson SM, Cauvy-Fraunié S, Cid N, Danger M, de Freitas Terra B, Girolamo AM, Del Campo R, Dyer F, Elosegi A, Faye E, Febria C, Figueroa R, Four B, Gessner MO, Gnohossou P, Cerezo RG, Gomez-Gener L, Graça MAS, Guareschi S, Gücker B, Hwan JL, Kubheka S, Langhans SD, Leigh C, Little CJ, Lorenz S, Marshall J, McIntosh A, Mendoza-Lera C, Meyer EI, Miliša M, Mlambo MC, Moleón M, Negus P, Niyogi D, Papatheodoulou A, Pardo I, Paril P, Pešić V, Rodriguez-Lozano P, Rolls RJ, Sanchez-Montoya MM, Savić A, Steward A, Stubbington R, Taleb A, Vorste RV, Waltham N, Zoppini A, Zarfl C.

Glob Chang Biol. 2019 May;25(5):1591-1611. doi: 10.1111/gcb.14537. Epub 2019 Feb 25.

PMID:
30628191
2.

Free-electron laser data for multiple-particle fluctuation scattering analysis.

Pande K, Donatelli JJ, Malmerberg E, Foucar L, Poon BK, Sutter M, Botha S, Basu S, Bruce Doak R, Dörner K, Epp SW, Englert L, Fromme R, Hartmann E, Hartmann R, Hauser G, Hattne J, Hosseinizadeh A, Kassemeyer S, Lomb L, Montero SFC, Menzel A, Rolles D, Rudenko A, Seibert MM, Sierra RG, Schwander P, Ourmazd A, Fromme P, Sauter NK, Bogan M, Bozek J, Bostedt C, Schlichting I, Kerfeld CA, Zwart PH.

Sci Data. 2018 Oct 2;5:180201. doi: 10.1038/sdata.2018.201.

3.

Effects of Dust Storms and Climatological Factors on Mortality and Morbidity of Cardiovascular Diseases Admitted to ED.

Al B, Bogan M, Zengin S, Sabak M, Kul S, Oktay MM, Bayram H, Vuruskan E.

Emerg Med Int. 2018 Jul 2;2018:3758506. doi: 10.1155/2018/3758506. eCollection 2018.

4.

Comparison of IV dexketoprofen trometamol, fentanyl, and paracetamol in the treatment of renal colic in the ED: A randomized controlled trial.

Al B, Sunar MM, Zengin S, Sabak M, Bogan M, Can B, Kul S, Murat Oktay M, Eren SH.

Am J Emerg Med. 2018 Apr;36(4):571-576. doi: 10.1016/j.ajem.2017.09.019. Epub 2017 Sep 14.

PMID:
29029797
5.

How Cubic Can Ice Be?

Amaya AJ, Pathak H, Modak VP, Laksmono H, Loh ND, Sellberg JA, Sierra RG, McQueen TA, Hayes MJ, Williams GJ, Messerschmidt M, Boutet S, Bogan MJ, Nilsson A, Stan CA, Wyslouzil BE.

J Phys Chem Lett. 2017 Jul 20;8(14):3216-3222. doi: 10.1021/acs.jpclett.7b01142. Epub 2017 Jun 30.

6.

Seasonality and predictability shape temporal species diversity.

Tonkin JD, Bogan MT, Bonada N, Rios-Touma B, Lytle DA.

Ecology. 2017 May;98(5):1201-1216. doi: 10.1002/ecy.1761. Epub 2017 Apr 18.

7.

Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser.

Ekeberg T, Svenda M, Seibert MM, Abergel C, Maia FR, Seltzer V, DePonte DP, Aquila A, Andreasson J, Iwan B, Jönsson O, Westphal D, Odić D, Andersson I, Barty A, Liang M, Martin AV, Gumprecht L, Fleckenstein H, Bajt S, Barthelmess M, Coppola N, Claverie JM, Loh ND, Bostedt C, Bozek JD, Krzywinski J, Messerschmidt M, Bogan MJ, Hampton CY, Sierra RG, Frank M, Shoeman RL, Lomb L, Foucar L, Epp SW, Rolles D, Rudenko A, Hartmann R, Hartmann A, Kimmel N, Holl P, Weidenspointner G, Rudek B, Erk B, Kassemeyer S, Schlichting I, Strüder L, Ullrich J, Schmidt C, Krasniqi F, Hauser G, Reich C, Soltau H, Schorb S, Hirsemann H, Wunderer C, Graafsma H, Chapman H, Hajdu J.

Sci Data. 2016 Aug 1;3:160060. doi: 10.1038/sdata.2016.60.

8.

Linking multidimensional functional diversity to quantitative methods: a graphical hypothesis--evaluation framework.

Boersma KS, Dee LE, Miller SJ, Bogan MT, Lytle DA, Gitelman AI.

Ecology. 2016 Mar;97(3):583-93.

PMID:
27197386
9.

Improving the Health of Populations.

Loehrer S, Lewis N, Bogan M.

Healthc Exec. 2016 Mar-Apr;31(2):82-3. No abstract available.

PMID:
27120927
10.

Concentric-flow electrokinetic injector enables serial crystallography of ribosome and photosystem II.

Sierra RG, Gati C, Laksmono H, Dao EH, Gul S, Fuller F, Kern J, Chatterjee R, Ibrahim M, Brewster AS, Young ID, Michels-Clark T, Aquila A, Liang M, Hunter MS, Koglin JE, Boutet S, Junco EA, Hayes B, Bogan MJ, Hampton CY, Puglisi EV, Sauter NK, Stan CA, Zouni A, Yano J, Yachandra VK, Soltis SM, Puglisi JD, DeMirci H.

Nat Methods. 2016 Jan;13(1):59-62. doi: 10.1038/nmeth.3667. Epub 2015 Nov 30.

11.

Correction to Scientific Evidence Supports a Ban on Microbeads.

Rochman CM, Kross SM, Armstrong JB, Bogan MT, Darling ES, Green SJ, Smyth AR, Veríssimo D.

Environ Sci Technol. 2015 Dec 15;49(24):14740. doi: 10.1021/acs.est.5b05043. Epub 2015 Nov 13. No abstract available.

PMID:
26565431
12.

Scientific Evidence Supports a Ban on Microbeads.

Rochman CM, Kross SM, Armstrong JB, Bogan MT, Darling ES, Green SJ, Smyth AR, Veríssimo D.

Environ Sci Technol. 2015 Sep 15;49(18):10759-61. doi: 10.1021/acs.est.5b03909. Epub 2015 Sep 3. No abstract available. Erratum in: Environ Sci Technol. 2015 Dec 15;49(24):14740.

PMID:
26334581
13.

Anomalous Behavior of the Homogeneous Ice Nucleation Rate in "No-Man's Land".

Laksmono H, McQueen TA, Sellberg JA, Loh ND, Huang C, Schlesinger D, Sierra RG, Hampton CY, Nordlund D, Beye M, Martin AV, Barty A, Seibert MM, Messerschmidt M, Williams GJ, Boutet S, Amann-Winkel K, Loerting T, Pettersson LG, Bogan MJ, Nilsson A.

J Phys Chem Lett. 2015 Jul 16;6(14):2826-2832. Epub 2015 Jul 2.

14.

X-ray emission spectroscopy of bulk liquid water in "no-man's land".

Sellberg JA, McQueen TA, Laksmono H, Schreck S, Beye M, DePonte DP, Kennedy B, Nordlund D, Sierra RG, Schlesinger D, Tokushima T, Zhovtobriukh I, Eckert S, Segtnan VH, Ogasawara H, Kubicek K, Techert S, Bergmann U, Dakovski GL, Schlotter WF, Harada Y, Bogan MJ, Wernet P, Föhlisch A, Pettersson LG, Nilsson A.

J Chem Phys. 2015 Jan 28;142(4):044505. doi: 10.1063/1.4905603.

PMID:
25637993
15.

Dispersal ability and habitat requirements determine landscape-level genetic patterns in desert aquatic insects.

Phillipsen IC, Kirk EH, Bogan MT, Mims MC, Olden JD, Lytle DA.

Mol Ecol. 2015 Jan;24(1):54-69. doi: 10.1111/mec.13003. Epub 2014 Dec 31.

PMID:
25402260
16.

Reabsorption of soft x-ray emission at high x-ray free-electron laser fluences.

Schreck S, Beye M, Sellberg JA, McQueen T, Laksmono H, Kennedy B, Eckert S, Schlesinger D, Nordlund D, Ogasawara H, Sierra RG, Segtnan VH, Kubicek K, Schlotter WF, Dakovski GL, Moeller SP, Bergmann U, Techert S, Pettersson LG, Wernet P, Bogan MJ, Harada Y, Nilsson A, Föhlisch A.

Phys Rev Lett. 2014 Oct 10;113(15):153002. Epub 2014 Oct 6.

PMID:
25375708
17.

Visualizing a protein quake with time-resolved X-ray scattering at a free-electron laser.

Arnlund D, Johansson LC, Wickstrand C, Barty A, Williams GJ, Malmerberg E, Davidsson J, Milathianaki D, DePonte DP, Shoeman RL, Wang D, James D, Katona G, Westenhoff S, White TA, Aquila A, Bari S, Berntsen P, Bogan M, van Driel TB, Doak RB, Kjær KS, Frank M, Fromme R, Grotjohann I, Henning R, Hunter MS, Kirian RA, Kosheleva I, Kupitz C, Liang M, Martin AV, Nielsen MM, Messerschmidt M, Seibert MM, Sjöhamn J, Stellato F, Weierstall U, Zatsepin NA, Spence JC, Fromme P, Schlichting I, Boutet S, Groenhof G, Chapman HN, Neutze R.

Nat Methods. 2014 Sep;11(9):923-6. doi: 10.1038/nmeth.3067. Epub 2014 Aug 10.

18.

Serial time-resolved crystallography of photosystem II using a femtosecond X-ray laser.

Kupitz C, Basu S, Grotjohann I, Fromme R, Zatsepin NA, Rendek KN, Hunter MS, Shoeman RL, White TA, Wang D, James D, Yang JH, Cobb DE, Reeder B, Sierra RG, Liu H, Barty A, Aquila AL, Deponte D, Kirian RA, Bari S, Bergkamp JJ, Beyerlein KR, Bogan MJ, Caleman C, Chao TC, Conrad CE, Davis KM, Fleckenstein H, Galli L, Hau-Riege SP, Kassemeyer S, Laksmono H, Liang M, Lomb L, Marchesini S, Martin AV, Messerschmidt M, Milathianaki D, Nass K, Ros A, Roy-Chowdhury S, Schmidt K, Seibert M, Steinbrener J, Stellato F, Yan L, Yoon C, Moore TA, Moore AL, Pushkar Y, Williams GJ, Boutet S, Doak RB, Weierstall U, Frank M, Chapman HN, Spence JC, Fromme P.

Nature. 2014 Sep 11;513(7517):261-5. doi: 10.1038/nature13453. Epub 2014 Jul 9.

19.

Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.

Kern J, Tran R, Alonso-Mori R, Koroidov S, Echols N, Hattne J, Ibrahim M, Gul S, Laksmono H, Sierra RG, Gildea RJ, Han G, Hellmich J, Lassalle-Kaiser B, Chatterjee R, Brewster AS, Stan CA, Glöckner C, Lampe A, DiFiore D, Milathianaki D, Fry AR, Seibert MM, Koglin JE, Gallo E, Uhlig J, Sokaras D, Weng TC, Zwart PH, Skinner DE, Bogan MJ, Messerschmidt M, Glatzel P, Williams GJ, Boutet S, Adams PD, Zouni A, Messinger J, Sauter NK, Bergmann U, Yano J, Yachandra VK.

Nat Commun. 2014 Jul 9;5:4371. doi: 10.1038/ncomms5371.

20.

Ultrafast X-ray probing of water structure below the homogeneous ice nucleation temperature.

Sellberg JA, Huang C, McQueen TA, Loh ND, Laksmono H, Schlesinger D, Sierra RG, Nordlund D, Hampton CY, Starodub D, DePonte DP, Beye M, Chen C, Martin AV, Barty A, Wikfeldt KT, Weiss TM, Caronna C, Feldkamp J, Skinner LB, Seibert MM, Messerschmidt M, Williams GJ, Boutet S, Pettersson LG, Bogan MJ, Nilsson A.

Nature. 2014 Jun 19;510(7505):381-4. doi: 10.1038/nature13266.

PMID:
24943953
21.

Accurate macromolecular structures using minimal measurements from X-ray free-electron lasers.

Hattne J, Echols N, Tran R, Kern J, Gildea RJ, Brewster AS, Alonso-Mori R, Glöckner C, Hellmich J, Laksmono H, Sierra RG, Lassalle-Kaiser B, Lampe A, Han G, Gul S, DiFiore D, Milathianaki D, Fry AR, Miahnahri A, White WE, Schafer DW, Seibert MM, Koglin JE, Sokaras D, Weng TC, Sellberg J, Latimer MJ, Glatzel P, Zwart PH, Grosse-Kunstleve RW, Bogan MJ, Messerschmidt M, Williams GJ, Boutet S, Messinger J, Zouni A, Yano J, Bergmann U, Yachandra VK, Adams PD, Sauter NK.

Nat Methods. 2014 May;11(5):545-8. doi: 10.1038/nmeth.2887. Epub 2014 Mar 16. Erratum in: Nat Methods. 2015 Jul;12(7):692.

22.

Toward unsupervised single-shot diffractive imaging of heterogeneous particles using X-ray free-electron lasers.

Park HJ, Loh ND, Sierra RG, Hampton CY, Starodub D, Martin AV, Barty A, Aquila A, Schulz J, Steinbrener J, Shoeman RL, Lomb L, Kassemeyer S, Bostedt C, Bozek J, Epp SW, Erk B, Hartmann R, Rolles D, Rudenko A, Rudek B, Foucar L, Kimmel N, Weidenspointner G, Hauser G, Holl P, Pedersoli E, Liang M, Hunter MS, Gumprecht L, Coppola N, Wunderer C, Graafsma H, Maia FR, Ekeberg T, Hantke M, Fleckenstein H, Hirsemann H, Nass K, Tobias HJ, Farquar GR, Benner WH, Hau-Riege S, Reich C, Hartmann A, Soltau H, Marchesini S, Bajt S, Barthelmess M, Strueder L, Ullrich J, Bucksbaum P, Frank M, Schlichting I, Chapman HN, Bogan MJ, Elser V.

Opt Express. 2013 Nov 18;21(23):28729-42. doi: 10.1364/OE.21.028729.

PMID:
24514385
23.

L-Edge X-ray Absorption Spectroscopy of Dilute Systems Relevant to Metalloproteins Using an X-ray Free-Electron Laser.

Mitzner R, Rehanek J, Kern J, Gul S, Hattne J, Taguchi T, Alonso-Mori R, Tran R, Weniger C, Schröder H, Quevedo W, Laksmono H, Sierra RG, Han G, Lassalle-Kaiser B, Koroidov S, Kubicek K, Schreck S, Kunnus K, Brzhezinskaya M, Firsov A, Minitti MP, Turner JJ, Moeller S, Sauter NK, Bogan MJ, Nordlund D, Schlotter WF, Messinger J, Borovik A, Techert S, de Groot FM, Föhlisch A, Erko A, Bergmann U, Yachandra VK, Wernet P, Yano J.

J Phys Chem Lett. 2013 Oct 9;4(21):3641-3647.

24.

Structure of a photosynthetic reaction centre determined by serial femtosecond crystallography.

Johansson LC, Arnlund D, Katona G, White TA, Barty A, DePonte DP, Shoeman RL, Wickstrand C, Sharma A, Williams GJ, Aquila A, Bogan MJ, Caleman C, Davidsson J, Doak RB, Frank M, Fromme R, Galli L, Grotjohann I, Hunter MS, Kassemeyer S, Kirian RA, Kupitz C, Liang M, Lomb L, Malmerberg E, Martin AV, Messerschmidt M, Nass K, Redecke L, Seibert MM, Sjöhamn J, Steinbrener J, Stellato F, Wang D, Wahlgren WY, Weierstall U, Westenhoff S, Zatsepin NA, Boutet S, Spence JC, Schlichting I, Chapman HN, Fromme P, Neutze R.

Nat Commun. 2013;4:2911. doi: 10.1038/ncomms3911.

25.

Serial femtosecond X-ray diffraction of 30S ribosomal subunit microcrystals in liquid suspension at ambient temperature using an X-ray free-electron laser.

Demirci H, Sierra RG, Laksmono H, Shoeman RL, Botha S, Barends TR, Nass K, Schlichting I, Doak RB, Gati C, Williams GJ, Boutet S, Messerschmidt M, Jogl G, Dahlberg AE, Gregory ST, Bogan MJ.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Sep;69(Pt 9):1066-9. doi: 10.1107/S174430911302099X. Epub 2013 Aug 19.

26.

Sensing the wavefront of x-ray free-electron lasers using aerosol spheres.

Loh ND, Starodub D, Lomb L, Hampton CY, Martin AV, Sierra RG, Barty A, Aquila A, Schulz J, Steinbrener J, Shoeman RL, Kassemeyer S, Bostedt C, Bozek J, Epp SW, Erk B, Hartmann R, Rolles D, Rudenko A, Rudek B, Foucar L, Kimmel N, Weidenspointner G, Hauser G, Holl P, Pedersoli E, Liang M, Hunter MS, Gumprecht L, Coppola N, Wunderer C, Graafsma H, Maia FR, Ekeberg T, Hantke M, Fleckenstein H, Hirsemann H, Nass K, White TA, Tobias HJ, Farquar GR, Benner WH, Hau-Riege S, Reich C, Hartmann A, Soltau H, Marchesini S, Bajt S, Barthelmess M, Strueder L, Ullrich J, Bucksbaum P, Frank M, Schlichting I, Chapman HN, Bogan MJ.

Opt Express. 2013 May 20;21(10):12385-94. doi: 10.1364/OE.21.012385.

PMID:
23736456
27.

X-ray free electron lasers motivate bioanalytical characterization of protein nanocrystals: serial femtosecond crystallography.

Bogan MJ.

Anal Chem. 2013 Apr 2;85(7):3464-71. doi: 10.1021/ac303716r. Epub 2013 Mar 21. Review.

PMID:
23517430
28.

Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature.

Kern J, Alonso-Mori R, Tran R, Hattne J, Gildea RJ, Echols N, Glöckner C, Hellmich J, Laksmono H, Sierra RG, Lassalle-Kaiser B, Koroidov S, Lampe A, Han G, Gul S, Difiore D, Milathianaki D, Fry AR, Miahnahri A, Schafer DW, Messerschmidt M, Seibert MM, Koglin JE, Sokaras D, Weng TC, Sellberg J, Latimer MJ, Grosse-Kunstleve RW, Zwart PH, White WE, Glatzel P, Adams PD, Bogan MJ, Williams GJ, Boutet S, Messinger J, Zouni A, Sauter NK, Yachandra VK, Bergmann U, Yano J.

Science. 2013 Apr 26;340(6131):491-5. doi: 10.1126/science.1234273. Epub 2013 Feb 14.

29.

Single-particle structure determination by correlations of snapshot X-ray diffraction patterns.

Starodub D, Aquila A, Bajt S, Barthelmess M, Barty A, Bostedt C, Bozek JD, Coppola N, Doak RB, Epp SW, Erk B, Foucar L, Gumprecht L, Hampton CY, Hartmann A, Hartmann R, Holl P, Kassemeyer S, Kimmel N, Laksmono H, Liang M, Loh ND, Lomb L, Martin AV, Nass K, Reich C, Rolles D, Rudek B, Rudenko A, Schulz J, Shoeman RL, Sierra RG, Soltau H, Steinbrener J, Stellato F, Stern S, Weidenspointner G, Frank M, Ullrich J, Strüder L, Schlichting I, Chapman HN, Spence JC, Bogan MJ.

Nat Commun. 2012;3:1276. doi: 10.1038/ncomms2288.

PMID:
23232406
30.

Natively inhibited Trypanosoma brucei cathepsin B structure determined by using an X-ray laser.

Redecke L, Nass K, DePonte DP, White TA, Rehders D, Barty A, Stellato F, Liang M, Barends TRM, Boutet S, Williams GJ, Messerschmidt M, Seibert MM, Aquila A, Arnlund D, Bajt S, Barth T, Bogan MJ, Caleman C, Chao TC, Doak RB, Fleckenstein H, Frank M, Fromme R, Galli L, Grotjohann I, Hunter MS, Johansson LC, Kassemeyer S, Katona G, Kirian RA, Koopmann R, Kupitz C, Lomb L, Martin AV, Mogk S, Neutze R, Shoeman RL, Steinbrener J, Timneanu N, Wang D, Weierstall U, Zatsepin NA, Spence JCH, Fromme P, Schlichting I, Duszenko M, Betzel C, Chapman HN.

Science. 2013 Jan 11;339(6116):227-230. doi: 10.1126/science.1229663. Epub 2012 Nov 29.

31.

Energy-dispersive X-ray emission spectroscopy using an X-ray free-electron laser in a shot-by-shot mode.

Alonso-Mori R, Kern J, Gildea RJ, Sokaras D, Weng TC, Lassalle-Kaiser B, Tran R, Hattne J, Laksmono H, Hellmich J, Glöckner C, Echols N, Sierra RG, Schafer DW, Sellberg J, Kenney C, Herbst R, Pines J, Hart P, Herrmann S, Grosse-Kunstleve RW, Latimer MJ, Fry AR, Messerschmidt MM, Miahnahri A, Seibert MM, Zwart PH, White WE, Adams PD, Bogan MJ, Boutet S, Williams GJ, Zouni A, Messinger J, Glatzel P, Sauter NK, Yachandra VK, Yano J, Bergmann U.

Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):19103-7. doi: 10.1073/pnas.1211384109. Epub 2012 Nov 5.

32.

Nanoflow electrospinning serial femtosecond crystallography.

Sierra RG, Laksmono H, Kern J, Tran R, Hattne J, Alonso-Mori R, Lassalle-Kaiser B, Glöckner C, Hellmich J, Schafer DW, Echols N, Gildea RJ, Grosse-Kunstleve RW, Sellberg J, McQueen TA, Fry AR, Messerschmidt MM, Miahnahri A, Seibert MM, Hampton CY, Starodub D, Loh ND, Sokaras D, Weng TC, Zwart PH, Glatzel P, Milathianaki D, White WE, Adams PD, Williams GJ, Boutet S, Zouni A, Messinger J, Sauter NK, Bergmann U, Yano J, Yachandra VK, Bogan MJ.

Acta Crystallogr D Biol Crystallogr. 2012 Nov;68(Pt 11):1584-7. doi: 10.1107/S0907444912038152. Epub 2012 Oct 18.

33.

Fractal morphology, imaging and mass spectrometry of single aerosol particles in flight.

Loh ND, Hampton CY, Martin AV, Starodub D, Sierra RG, Barty A, Aquila A, Schulz J, Lomb L, Steinbrener J, Shoeman RL, Kassemeyer S, Bostedt C, Bozek J, Epp SW, Erk B, Hartmann R, Rolles D, Rudenko A, Rudek B, Foucar L, Kimmel N, Weidenspointner G, Hauser G, Holl P, Pedersoli E, Liang M, Hunter MS, Gumprecht L, Coppola N, Wunderer C, Graafsma H, Maia FR, Ekeberg T, Hantke M, Fleckenstein H, Hirsemann H, Nass K, White TA, Tobias HJ, Farquar GR, Benner WH, Hau-Riege SP, Reich C, Hartmann A, Soltau H, Marchesini S, Bajt S, Barthelmess M, Bucksbaum P, Hodgson KO, Strüder L, Ullrich J, Frank M, Schlichting I, Chapman HN, Bogan MJ.

Nature. 2012 Jun 27;486(7404):513-7. doi: 10.1038/nature11222. Erratum in: Nature. 2012 Sep 20;489(7416):460. Hunter, M M [corrected to Hunter, M S].

PMID:
22739316
34.

Femtosecond dark-field imaging with an X-ray free electron laser.

Martin AV, Loh ND, Hampton CY, Sierra RG, Wang F, Aquila A, Bajt S, Barthelmess M, Bostedt C, Bozek JD, Coppola N, Epp SW, Erk B, Fleckenstein H, Foucar L, Frank M, Graafsma H, Gumprecht L, Hartmann A, Hartmann R, Hauser G, Hirsemann H, Holl P, Kassemeyer S, Kimmel N, Liang M, Lomb L, Maia FR, Marchesini S, Nass K, Pedersoli E, Reich C, Rolles D, Rudek B, Rudenko A, Schulz J, Shoeman RL, Soltau H, Starodub D, Steinbrener J, Stellato F, Strüder L, Ullrich J, Weidenspointner G, White TA, Wunderer CB, Barty A, Schlichting I, Bogan MJ, Chapman HN.

Opt Express. 2012 Jun 4;20(12):13501-12. doi: 10.1364/OE.20.013501.

PMID:
22714377
35.

Room temperature femtosecond X-ray diffraction of photosystem II microcrystals.

Kern J, Alonso-Mori R, Hellmich J, Tran R, Hattne J, Laksmono H, Glöckner C, Echols N, Sierra RG, Sellberg J, Lassalle-Kaiser B, Gildea RJ, Glatzel P, Grosse-Kunstleve RW, Latimer MJ, McQueen TA, DiFiore D, Fry AR, Messerschmidt M, Miahnahri A, Schafer DW, Seibert MM, Sokaras D, Weng TC, Zwart PH, White WE, Adams PD, Bogan MJ, Boutet S, Williams GJ, Messinger J, Sauter NK, Zouni A, Bergmann U, Yano J, Yachandra VK.

Proc Natl Acad Sci U S A. 2012 Jun 19;109(25):9721-6. doi: 10.1073/pnas.1204598109. Epub 2012 Jun 4.

36.

High-resolution protein structure determination by serial femtosecond crystallography.

Boutet S, Lomb L, Williams GJ, Barends TR, Aquila A, Doak RB, Weierstall U, DePonte DP, Steinbrener J, Shoeman RL, Messerschmidt M, Barty A, White TA, Kassemeyer S, Kirian RA, Seibert MM, Montanez PA, Kenney C, Herbst R, Hart P, Pines J, Haller G, Gruner SM, Philipp HT, Tate MW, Hromalik M, Koerner LJ, van Bakel N, Morse J, Ghonsalves W, Arnlund D, Bogan MJ, Caleman C, Fromme R, Hampton CY, Hunter MS, Johansson LC, Katona G, Kupitz C, Liang M, Martin AV, Nass K, Redecke L, Stellato F, Timneanu N, Wang D, Zatsepin NA, Schafer D, Defever J, Neutze R, Fromme P, Spence JC, Chapman HN, Schlichting I.

Science. 2012 Jul 20;337(6092):362-4. doi: 10.1126/science.1217737. Epub 2012 May 31.

37.

Femtosecond free-electron laser x-ray diffraction data sets for algorithm development.

Kassemeyer S, Steinbrener J, Lomb L, Hartmann E, Aquila A, Barty A, Martin AV, Hampton CY, Bajt S, Barthelmess M, Barends TR, Bostedt C, Bott M, Bozek JD, Coppola N, Cryle M, DePonte DP, Doak RB, Epp SW, Erk B, Fleckenstein H, Foucar L, Graafsma H, Gumprecht L, Hartmann A, Hartmann R, Hauser G, Hirsemann H, Hömke A, Holl P, Jönsson O, Kimmel N, Krasniqi F, Liang M, Maia FR, Marchesini S, Nass K, Reich C, Rolles D, Rudek B, Rudenko A, Schmidt C, Schulz J, Shoeman RL, Sierra RG, Soltau H, Spence JC, Starodub D, Stellato F, Stern S, Stier G, Svenda M, Weidenspointner G, Weierstall U, White TA, Wunderer C, Frank M, Chapman HN, Ullrich J, Strüder L, Bogan MJ, Schlichting I.

Opt Express. 2012 Feb 13;20(4):4149-58. doi: 10.1364/OE.20.004149.

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Time-resolved protein nanocrystallography using an X-ray free-electron laser.

Aquila A, Hunter MS, Doak RB, Kirian RA, Fromme P, White TA, Andreasson J, Arnlund D, Bajt S, Barends TR, Barthelmess M, Bogan MJ, Bostedt C, Bottin H, Bozek JD, Caleman C, Coppola N, Davidsson J, DePonte DP, Elser V, Epp SW, Erk B, Fleckenstein H, Foucar L, Frank M, Fromme R, Graafsma H, Grotjohann I, Gumprecht L, Hajdu J, Hampton CY, Hartmann A, Hartmann R, Hau-Riege S, Hauser G, Hirsemann H, Holl P, Holton JM, Hömke A, Johansson L, Kimmel N, Kassemeyer S, Krasniqi F, Kühnel KU, Liang M, Lomb L, Malmerberg E, Marchesini S, Martin AV, Maia FR, Messerschmidt M, Nass K, Reich C, Neutze R, Rolles D, Rudek B, Rudenko A, Schlichting I, Schmidt C, Schmidt KE, Schulz J, Seibert MM, Shoeman RL, Sierra R, Soltau H, Starodub D, Stellato F, Stern S, Strüder L, Timneanu N, Ullrich J, Wang X, Williams GJ, Weidenspointner G, Weierstall U, Wunderer C, Barty A, Spence JC, Chapman HN.

Opt Express. 2012 Jan 30;20(3):2706-16. doi: 10.1364/OE.20.002706.

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In vivo protein crystallization opens new routes in structural biology.

Koopmann R, Cupelli K, Redecke L, Nass K, Deponte DP, White TA, Stellato F, Rehders D, Liang M, Andreasson J, Aquila A, Bajt S, Barthelmess M, Barty A, Bogan MJ, Bostedt C, Boutet S, Bozek JD, Caleman C, Coppola N, Davidsson J, Doak RB, Ekeberg T, Epp SW, Erk B, Fleckenstein H, Foucar L, Graafsma H, Gumprecht L, Hajdu J, Hampton CY, Hartmann A, Hartmann R, Hauser G, Hirsemann H, Holl P, Hunter MS, Kassemeyer S, Kirian RA, Lomb L, Maia FR, Kimmel N, Martin AV, Messerschmidt M, Reich C, Rolles D, Rudek B, Rudenko A, Schlichting I, Schulz J, Seibert MM, Shoeman RL, Sierra RG, Soltau H, Stern S, Strüder L, Timneanu N, Ullrich J, Wang X, Weidenspointner G, Weierstall U, Williams GJ, Wunderer CB, Fromme P, Spence JC, Stehle T, Chapman HN, Betzel C, Duszenko M.

Nat Methods. 2012 Jan 29;9(3):259-62. doi: 10.1038/nmeth.1859.

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Lipidic phase membrane protein serial femtosecond crystallography.

Johansson LC, Arnlund D, White TA, Katona G, Deponte DP, Weierstall U, Doak RB, Shoeman RL, Lomb L, Malmerberg E, Davidsson J, Nass K, Liang M, Andreasson J, Aquila A, Bajt S, Barthelmess M, Barty A, Bogan MJ, Bostedt C, Bozek JD, Caleman C, Coffee R, Coppola N, Ekeberg T, Epp SW, Erk B, Fleckenstein H, Foucar L, Graafsma H, Gumprecht L, Hajdu J, Hampton CY, Hartmann R, Hartmann A, Hauser G, Hirsemann H, Holl P, Hunter MS, Kassemeyer S, Kimmel N, Kirian RA, Maia FR, Marchesini S, Martin AV, Reich C, Rolles D, Rudek B, Rudenko A, Schlichting I, Schulz J, Seibert MM, Sierra RG, Soltau H, Starodub D, Stellato F, Stern S, Strüder L, Timneanu N, Ullrich J, Wahlgren WY, Wang X, Weidenspointner G, Wunderer C, Fromme P, Chapman HN, Spence JC, Neutze R.

Nat Methods. 2012 Jan 29;9(3):263-5. doi: 10.1038/nmeth.1867.

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Self-terminating diffraction gates femtosecond X-ray nanocrystallography measurements.

Barty A, Caleman C, Aquila A, Timneanu N, Lomb L, White TA, Andreasson J, Arnlund D, Bajt S, Barends TR, Barthelmess M, Bogan MJ, Bostedt C, Bozek JD, Coffee R, Coppola N, Davidsson J, Deponte DP, Doak RB, Ekeberg T, Elser V, Epp SW, Erk B, Fleckenstein H, Foucar L, Fromme P, Graafsma H, Gumprecht L, Hajdu J, Hampton CY, Hartmann R, Hartmann A, Hauser G, Hirsemann H, Holl P, Hunter MS, Johansson L, Kassemeyer S, Kimmel N, Kirian RA, Liang M, Maia FR, Malmerberg E, Marchesini S, Martin AV, Nass K, Neutze R, Reich C, Rolles D, Rudek B, Rudenko A, Scott H, Schlichting I, Schulz J, Seibert MM, Shoeman RL, Sierra RG, Soltau H, Spence JC, Stellato F, Stern S, Strüder L, Ullrich J, Wang X, Weidenspointner G, Weierstall U, Wunderer CB, Chapman HN.

Nat Photonics. 2012;6:35-40.

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Radiation damage in protein serial femtosecond crystallography using an x-ray free-electron laser.

Lomb L, Barends TR, Kassemeyer S, Aquila A, Epp SW, Erk B, Foucar L, Hartmann R, Rudek B, Rolles D, Rudenko A, Shoeman RL, Andreasson J, Bajt S, Barthelmess M, Barty A, Bogan MJ, Bostedt C, Bozek JD, Caleman C, Coffee R, Coppola N, Deponte DP, Doak RB, Ekeberg T, Fleckenstein H, Fromme P, Gebhardt M, Graafsma H, Gumprecht L, Hampton CY, Hartmann A, Hauser G, Hirsemann H, Holl P, Holton JM, Hunter MS, Kabsch W, Kimmel N, Kirian RA, Liang M, Maia FR, Meinhart A, Marchesini S, Martin AV, Nass K, Reich C, Schulz J, Seibert MM, Sierra R, Soltau H, Spence JC, Steinbrener J, Stellato F, Stern S, Timneanu N, Wang X, Weidenspointner G, Weierstall U, White TA, Wunderer C, Chapman HN, Ullrich J, Strüder L, Schlichting I.

Phys Rev B Condens Matter Mater Phys. 2011 Dec 1;84(21):214111.

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Unsupervised classification of single-particle X-ray diffraction snapshots by spectral clustering.

Yoon CH, Schwander P, Abergel C, Andersson I, Andreasson J, Aquila A, Bajt S, Barthelmess M, Barty A, Bogan MJ, Bostedt C, Bozek J, Chapman HN, Claverie JM, Coppola N, DePonte DP, Ekeberg T, Epp SW, Erk B, Fleckenstein H, Foucar L, Graafsma H, Gumprecht L, Hajdu J, Hampton CY, Hartmann A, Hartmann E, Hartmann R, Hauser G, Hirsemann H, Holl P, Kassemeyer S, Kimmel N, Kiskinova M, Liang M, Loh NT, Lomb L, Maia FR, Martin AV, Nass K, Pedersoli E, Reich C, Rolles D, Rudek B, Rudenko A, Schlichting I, Schulz J, Seibert M, Seltzer V, Shoeman RL, Sierra RG, Soltau H, Starodub D, Steinbrener J, Stier G, Strüder L, Svenda M, Ullrich J, Weidenspointner G, White TA, Wunderer C, Ourmazd A.

Opt Express. 2011 Aug 15;19(17):16542-9. doi: 10.1364/OE.19.016542.

PMID:
21935018
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Multipurpose modular experimental station for the DiProI beamline of Fermi@Elettra free electron laser.

Pedersoli E, Capotondi F, Cocco D, Zangrando M, Kaulich B, Menk RH, Locatelli A, Mentes TO, Spezzani C, Sandrin G, Bacescu DM, Kiskinova M, Bajt S, Barthelmess M, Barty A, Schulz J, Gumprecht L, Chapman HN, Nelson AJ, Frank M, Pivovaroff MJ, Woods BW, Bogan MJ, Hajdu J.

Rev Sci Instrum. 2011 Apr;82(4):043711. doi: 10.1063/1.3582155.

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New light on disordered ensembles: ab initio structure determination of one particle from scattering fluctuations of many copies.

Saldin DK, Poon HC, Bogan MJ, Marchesini S, Shapiro DA, Kirian RA, Weierstall U, Spence JC.

Phys Rev Lett. 2011 Mar 18;106(11):115501. Epub 2011 Mar 14.

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Single mimivirus particles intercepted and imaged with an X-ray laser.

Seibert MM, Ekeberg T, Maia FR, Svenda M, Andreasson J, Jönsson O, Odić D, Iwan B, Rocker A, Westphal D, Hantke M, DePonte DP, Barty A, Schulz J, Gumprecht L, Coppola N, Aquila A, Liang M, White TA, Martin A, Caleman C, Stern S, Abergel C, Seltzer V, Claverie JM, Bostedt C, Bozek JD, Boutet S, Miahnahri AA, Messerschmidt M, Krzywinski J, Williams G, Hodgson KO, Bogan MJ, Hampton CY, Sierra RG, Starodub D, Andersson I, Bajt S, Barthelmess M, Spence JC, Fromme P, Weierstall U, Kirian R, Hunter M, Doak RB, Marchesini S, Hau-Riege SP, Frank M, Shoeman RL, Lomb L, Epp SW, Hartmann R, Rolles D, Rudenko A, Schmidt C, Foucar L, Kimmel N, Holl P, Rudek B, Erk B, Hömke A, Reich C, Pietschner D, Weidenspointner G, Strüder L, Hauser G, Gorke H, Ullrich J, Schlichting I, Herrmann S, Schaller G, Schopper F, Soltau H, Kühnel KU, Andritschke R, Schröter CD, Krasniqi F, Bott M, Schorb S, Rupp D, Adolph M, Gorkhover T, Hirsemann H, Potdevin G, Graafsma H, Nilsson B, Chapman HN, Hajdu J.

Nature. 2011 Feb 3;470(7332):78-81. doi: 10.1038/nature09748.

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Femtosecond X-ray protein nanocrystallography.

Chapman HN, Fromme P, Barty A, White TA, Kirian RA, Aquila A, Hunter MS, Schulz J, DePonte DP, Weierstall U, Doak RB, Maia FR, Martin AV, Schlichting I, Lomb L, Coppola N, Shoeman RL, Epp SW, Hartmann R, Rolles D, Rudenko A, Foucar L, Kimmel N, Weidenspointner G, Holl P, Liang M, Barthelmess M, Caleman C, Boutet S, Bogan MJ, Krzywinski J, Bostedt C, Bajt S, Gumprecht L, Rudek B, Erk B, Schmidt C, Hömke A, Reich C, Pietschner D, Strüder L, Hauser G, Gorke H, Ullrich J, Herrmann S, Schaller G, Schopper F, Soltau H, Kühnel KU, Messerschmidt M, Bozek JD, Hau-Riege SP, Frank M, Hampton CY, Sierra RG, Starodub D, Williams GJ, Hajdu J, Timneanu N, Seibert MM, Andreasson J, Rocker A, Jönsson O, Svenda M, Stern S, Nass K, Andritschke R, Schröter CD, Krasniqi F, Bott M, Schmidt KE, Wang X, Grotjohann I, Holton JM, Barends TR, Neutze R, Marchesini S, Fromme R, Schorb S, Rupp D, Adolph M, Gorkhover T, Andersson I, Hirsemann H, Potdevin G, Graafsma H, Nilsson B, Spence JC.

Nature. 2011 Feb 3;470(7332):73-7. doi: 10.1038/nature09750.

48.

Cryptotomography: reconstructing 3D Fourier intensities from randomly oriented single-shot diffraction patterns.

Loh ND, Bogan MJ, Elser V, Barty A, Boutet S, Bajt S, Hajdu J, Ekeberg T, Maia FR, Schulz J, Seibert MM, Iwan B, Timneanu N, Marchesini S, Schlichting I, Shoeman RL, Lomb L, Frank M, Liang M, Chapman HN.

Phys Rev Lett. 2010 Jun 4;104(22):225501. Epub 2010 Jun 2. Erratum in: Phys Rev Lett. 2010 Jun 11;104(23):239902.

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Sacrificial tamper slows down sample explosion in FLASH diffraction experiments.

Hau-Riege SP, Boutet S, Barty A, Bajt S, Bogan MJ, Frank M, Andreasson J, Iwan B, Seibert MM, Hajdu J, Sakdinawat A, Schulz J, Treusch R, Chapman HN.

Phys Rev Lett. 2010 Feb 12;104(6):064801. Epub 2010 Feb 12.

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Demographic stability metrics for conservation prioritization of isolated populations.

Finn DS, Bogan MT, Lytle DA.

Conserv Biol. 2009 Oct;23(5):1185-94.

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