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Items: 1 to 50 of 52

1.

Intraspecific Variation in Protists: Clues for Microevolution from Poteriospumella lacustris (Chrysophyceae).

Majda S, Boenigk J, Beisser D.

Genome Biol Evol. 2019 Sep 1;11(9):2492-2504. doi: 10.1093/gbe/evz171.

2.

Interaction-Specific Changes in the Transcriptome of Polynucleobacter asymbioticus Caused by Varying Protistan Communities.

Beisser D, Bock C, Hahn MW, Vos M, Sures B, Rahmann S, Boenigk J.

Front Microbiol. 2019 Jul 9;10:1498. doi: 10.3389/fmicb.2019.01498. eCollection 2019.

3.

Putatively asexual chrysophytes have meiotic genes: evidence from transcriptomic data.

Kraus D, Chi J, Boenigk J, Beisser D, Graupner N, Dunthorn M.

PeerJ. 2019 Jan 16;6:e5894. doi: 10.7717/peerj.5894. eCollection 2019.

4.

SEDE-GPS: socio-economic data enrichment based on GPS information.

Sperlea T, Füser S, Boenigk J, Heider D.

BMC Bioinformatics. 2018 Nov 30;19(Suppl 15):440. doi: 10.1186/s12859-018-2419-4.

5.

Silver stress differentially affects growth of phototrophic and heterotrophic chrysomonad flagellate populations.

Bock C, Zimmermann S, Beisser D, Dinglinger SM, Engelskirchen S, Giesemann P, Klink S, Olefeld JL, Rahmann S, Vos M, Boenigk J, Sures B.

Environ Pollut. 2019 Jan;244:314-322. doi: 10.1016/j.envpol.2018.09.146. Epub 2018 Oct 11.

PMID:
30343232
6.

Synchrony of Eukaryotic and Prokaryotic Planktonic Communities in Three Seasonally Sampled Austrian Lakes.

Bock C, Salcher M, Jensen M, Pandey RV, Boenigk J.

Front Microbiol. 2018 Jun 15;9:1290. doi: 10.3389/fmicb.2018.01290. eCollection 2018.

7.

Responses of stream microbes to multiple anthropogenic stressors in a mesocosm study.

Nuy JK, Lange A, Beermann AJ, Jensen M, Elbrecht V, Röhl O, Peršoh D, Begerow D, Leese F, Boenigk J.

Sci Total Environ. 2018 Aug 15;633:1287-1301. doi: 10.1016/j.scitotenv.2018.03.077. Epub 2018 Mar 30.

8.

Evolution of heterotrophy in chrysophytes as reflected by comparative transcriptomics.

Graupner N, Jensen M, Bock C, Marks S, Rahmann S, Beisser D, Boenigk J.

FEMS Microbiol Ecol. 2018 Apr 1;94(4). doi: 10.1093/femsec/fiy039.

9.

Cryptophyta as major bacterivores in freshwater summer plankton.

Grujcic V, Nuy JK, Salcher MM, Shabarova T, Kasalicky V, Boenigk J, Jensen M, Simek K.

ISME J. 2018 Jun;12(7):1668-1681. doi: 10.1038/s41396-018-0057-5. Epub 2018 Feb 20.

10.

TaxMapper: an analysis tool, reference database and workflow for metatranscriptome analysis of eukaryotic microorganisms.

Beisser D, Graupner N, Grossmann L, Timm H, Boenigk J, Rahmann S.

BMC Genomics. 2017 Oct 16;18(1):787. doi: 10.1186/s12864-017-4168-6.

11.

Flooding Duration Affects the Structure of Terrestrial and Aquatic Microbial Eukaryotic Communities.

Röhl O, Graupner N, Peršoh D, Kemler M, Mittelbach M, Boenigk J, Begerow D.

Microb Ecol. 2018 May;75(4):875-887. doi: 10.1007/s00248-017-1085-9. Epub 2017 Oct 12.

PMID:
29026984
12.

High-throughput sequencing of microbial eukaryotes in Lake Baikal reveals ecologically differentiated communities and novel evolutionary radiations.

Yi Z, Berney C, Hartikainen H, Mahamdallie S, Gardner M, Boenigk J, Cavalier-Smith T, Bass D.

FEMS Microbiol Ecol. 2017 Aug 1;93(8). doi: 10.1093/femsec/fix073.

PMID:
28575320
13.

Killing the killer: predation between protists and predatory bacteria.

Johnke J, Boenigk J, Harms H, Chatzinotas A.

FEMS Microbiol Lett. 2017 May 1;364(9). doi: 10.1093/femsle/fnx089.

PMID:
28444379
14.

Comprehensive transcriptome analysis provides new insights into nutritional strategies and phylogenetic relationships of chrysophytes.

Beisser D, Graupner N, Bock C, Wodniok S, Grossmann L, Vos M, Sures B, Rahmann S, Boenigk J.

PeerJ. 2017 Jan 10;5:e2832. doi: 10.7717/peerj.2832. eCollection 2017.

15.

Quantitative Proteomics Reveals Ecophysiological Effects of Light and Silver Stress on the Mixotrophic Protist Poterioochromonas malhamensis.

Beisser D, Kaschani F, Graupner N, Grossmann L, Jensen M, Ninck S, Schulz F, Rahmann S, Boenigk J, Kaiser M.

PLoS One. 2017 Jan 5;12(1):e0168183. doi: 10.1371/journal.pone.0168183. eCollection 2017.

16.

Trade-off between taxon diversity and functional diversity in European lake ecosystems.

Grossmann L, Beisser D, Bock C, Chatzinotas A, Jensen M, Preisfeld A, Psenner R, Rahmann S, Wodniok S, Boenigk J.

Mol Ecol. 2016 Dec;25(23):5876-5888. doi: 10.1111/mec.13878. Epub 2016 Nov 14.

PMID:
27747959
17.

Protistan community analysis: key findings of a large-scale molecular sampling.

Grossmann L, Jensen M, Heider D, Jost S, Glücksman E, Hartikainen H, Mahamdallie SS, Gardner M, Hoffmann D, Bass D, Boenigk J.

ISME J. 2016 Sep;10(9):2269-79. doi: 10.1038/ismej.2016.10. Epub 2016 Feb 9.

18.

Small but Manifold - Hidden Diversity in "Spumella-like Flagellates".

Grossmann L, Bock C, Schweikert M, Boenigk J.

J Eukaryot Microbiol. 2016 Jul;63(4):419-39. doi: 10.1111/jeu.12287. Epub 2016 Jan 13.

19.

AmpliconDuo: A Split-Sample Filtering Protocol for High-Throughput Amplicon Sequencing of Microbial Communities.

Lange A, Jost S, Heider D, Bock C, Budeus B, Schilling E, Strittmatter A, Boenigk J, Hoffmann D.

PLoS One. 2015 Nov 2;10(11):e0141590. doi: 10.1371/journal.pone.0141590. eCollection 2015.

20.

The influence of environmental factors on protistan microorganisms in grassland soils along a land-use gradient.

Glaser K, Kuppardt A, Boenigk J, Harms H, Fetzer I, Chatzinotas A.

Sci Total Environ. 2015 Dec 15;537:33-42. doi: 10.1016/j.scitotenv.2015.07.158. Epub 2015 Aug 14.

PMID:
26282737
21.

Magnesiothermic conversion of the silica-mineralizing golden algae Mallomonas caudata and Synura petersenii to elemental silicon with high geometric precision.

Petrack J, Jost S, Boenigk J, Epple M.

Beilstein J Nanotechnol. 2014 Apr 30;5:554-60. doi: 10.3762/bjnano.5.65. eCollection 2014.

22.

Effects of silver nitrate and silver nanoparticles on a planktonic community: general trends after short-term exposure.

Boenigk J, Beisser D, Zimmermann S, Bock C, Jakobi J, Grabner D, Groβmann L, Rahmann S, Barcikowski S, Sures B.

PLoS One. 2014 Apr 22;9(4):e95340. doi: 10.1371/journal.pone.0095340. eCollection 2014. Erratum in: PLoS One. 2014;9(8):e107092.

23.

Differential freshwater flagellate community response to bacterial food quality with a focus on Limnohabitans bacteria.

Šimek K, Kasalický V, Jezbera J, Horňák K, Nedoma J, Hahn MW, Bass D, Jost S, Boenigk J.

ISME J. 2013 Aug;7(8):1519-30. doi: 10.1038/ismej.2013.57. Epub 2013 Apr 4.

24.

Concepts in protistology: species definitions and boundaries.

Boenigk J, Ereshefsky M, Hoef-Emden K, Mallet J, Bass D.

Eur J Protistol. 2012 May;48(2):96-102. doi: 10.1016/j.ejop.2011.11.004. Epub 2011 Dec 29.

PMID:
22209540
25.

CANGS DB: a stand-alone web-based database tool for processing, managing and analyzing 454 data in biodiversity studies.

Pandey RV, Nolte V, Boenigk J, Schlötterer C.

BMC Res Notes. 2011 Jun 30;4:227. doi: 10.1186/1756-0500-4-227.

26.

Contrasting seasonal niche separation between rare and abundant taxa conceals the extent of protist diversity.

Nolte V, Pandey RV, Jost S, Medinger R, Ottenwälder B, Boenigk J, Schlötterer C.

Mol Ecol. 2010 Jul;19(14):2908-15. doi: 10.1111/j.1365-294X.2010.04669.x. Epub 2010 Jul 1.

27.

Diversity in a hidden world: potential and limitation of next-generation sequencing for surveys of molecular diversity of eukaryotic microorganisms.

Medinger R, Nolte V, Pandey RV, Jost S, Ottenwälder B, Schlötterer C, Boenigk J.

Mol Ecol. 2010 Mar;19 Suppl 1:32-40. doi: 10.1111/j.1365-294X.2009.04478.x.

28.

Reverse evolution: driving forces behind the loss of acquired photosynthetic traits.

de Castro F, Gaedke U, Boenigk J.

PLoS One. 2009 Dec 29;4(12):e8465. doi: 10.1371/journal.pone.0008465.

29.

Genetic diversity of eukaryotic plankton assemblages in Eastern Tibetan Lakes differing by their salinity and altitude.

Wu QL, Chatzinotas A, Wang J, Boenigk J.

Microb Ecol. 2009 Oct;58(3):569-81. doi: 10.1007/s00248-009-9526-8. Epub 2009 May 16.

30.

Phylogenetic placement of the Cyrtolophosididae Stokes, 1888 (Ciliophora; Colpodea) and neotypification of Aristerostoma marinum Kahl, 1931.

Dunthorn M, Eppinger M, Schwarz MV, Schweikert M, Boenigk J, Katz LA, Stoeck T.

Int J Syst Evol Microbiol. 2009 Jan;59(Pt 1):167-80. doi: 10.1099/ijs.0.000935-0.

PMID:
19126743
31.

The past and present classification problem with nanoflagellates exemplified by the genus Monas.

Boenigk J.

Protist. 2008 Apr;159(2):319-37. doi: 10.1016/j.protis.2008.01.001. Epub 2008 Mar 5. No abstract available.

PMID:
18321779
32.

Multigene phylogenies of clonal Spumella-like strains, a cryptic heterotrophic nanoflagellate, isolated from different geographical regions.

Stoeck T, Jost S, Boenigk J.

Int J Syst Evol Microbiol. 2008 Mar;58(Pt 3):716-24. doi: 10.1099/ijs.0.65310-0.

PMID:
18319484
33.
34.

Differential thermal adaptation of clonal strains of a protist morphospecies originating from different climatic zones.

Boenigk J, Jost S, Stoeck T, Garstecki T.

Environ Microbiol. 2007 Mar;9(3):593-602.

PMID:
17298360
35.

Evidence for geographic isolation and signs of endemism within a protistan morphospecies.

Boenigk J, Pfandl K, Garstecki T, Harms H, Novarino G, Chatzinotas A.

Appl Environ Microbiol. 2006 Aug;72(8):5159-64.

36.
38.

Heavy metal toxicity and bioavailability of dissolved nutrients to a bacterivorous flagellate are linked to suspended particle physical properties.

Boenigk J, Wiedlroither A, Pfandl K.

Aquat Toxicol. 2005 Feb 10;71(3):249-59. Epub 2004 Dec 31.

PMID:
15670631
39.
40.
41.

Impact of violacein-producing bacteria on survival and feeding of bacterivorous nanoflagellates.

Matz C, Deines P, Boenigk J, Arndt H, Eberl L, Kjelleberg S, Jürgens K.

Appl Environ Microbiol. 2004 Mar;70(3):1593-9.

43.
44.

Isolation of novel ultramicrobacteria classified as actinobacteria from five freshwater habitats in Europe and Asia.

Hahn MW, Lünsdorf H, Wu Q, Schauer M, Höfle MG, Boenigk J, Stadler P.

Appl Environ Microbiol. 2003 Mar;69(3):1442-51.

45.

Bacterivory by heterotrophic flagellates: community structure and feeding strategies.

Boenigk J, Arndt H.

Antonie Van Leeuwenhoek. 2002 Aug;81(1-4):465-80. Review.

PMID:
12448743
46.
47.

Abiotic Fe(III) induced mineralization of phenolic substances.

Pracht J, Boenigk J, Isenbeck-Schröter M, Keppler F, Schöler HF.

Chemosphere. 2001 Aug;44(4):613-9.

PMID:
11482648
48.

Confusing selective feeding with differential digestion in bacterivorous nanoflagellates.

Boenigk J, Matz AC, Jurgens K, Arndt H.

J Eukaryot Microbiol. 2001 Jul-Aug;48(4):425-32.

PMID:
11456318
49.

Particle handling during interception feeding by four species of heterotrophic nanoflagellates.

Boenigk J, Arndt H.

J Eukaryot Microbiol. 2000 Jul-Aug;47(4):350-8.

PMID:
11140448
50.

Schiff base formation in the development of a spectrophotometric assay for sulfonamides.

Colaizzi JL, Boenigk JW, Martin AN, Knevel AM.

J Pharm Sci. 1965 Apr;54(4):564-8. No abstract available.

PMID:
5842340

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