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Items: 1 to 50 of 213

1.

MetaMarker: a de novo pipeline for discovering novel metagenomic biomarkers.

Koohi-Moghadam M, Borad M, Tran N, Swanson K, Boardman L, Sun H, Wang J.

Bioinformatics. 2019 Mar 2. pii: btz123. doi: 10.1093/bioinformatics/btz123. [Epub ahead of print]

PMID:
30825371
2.

Body mass index is negatively associated with telomere length: a collaborative cross-sectional meta-analysis of 87 observational studies.

Gielen M, Hageman GJ, Antoniou EE, Nordfjall K, Mangino M, Balasubramanyam M, de Meyer T, Hendricks AE, Giltay EJ, Hunt SC, Nettleton JA, Salpea KD, Diaz VA, Farzaneh-Far R, Atzmon G, Harris SE, Hou L, Gilley D, Hovatta I, Kark JD, Nassar H, Kurz DJ, Mather KA, Willeit P, Zheng YL, Pavanello S, Demerath EW, Rode L, Bunout D, Steptoe A, Boardman L, Marti A, Needham B, Zheng W, Ramsey-Goldman R, Pellatt AJ, Kaprio J, Hofmann JN, Gieger C, Paolisso G, Hjelmborg JBH, Mirabello L, Seeman T, Wong J, van der Harst P, Broer L, Kronenberg F, Kollerits B, Strandberg T, Eisenberg DTA, Duggan C, Verhoeven JE, Schaakxs R, Zannolli R, Dos Reis RMR, Charchar FJ, Tomaszewski M, Mons U, Demuth I, Iglesias Molli AE, Cheng G, Krasnienkov D, D'Antono B, Kasielski M, McDonnell BJ, Ebstein RP, Sundquist K, Pare G, Chong M, Zeegers MP; TELOMAAS group.

Am J Clin Nutr. 2018 Sep 1;108(3):453-475. doi: 10.1093/ajcn/nqy107.

PMID:
30535086
3.

Distinct microbes, metabolites, and ecologies define the microbiome in deficient and proficient mismatch repair colorectal cancers.

Hale VL, Jeraldo P, Chen J, Mundy M, Yao J, Priya S, Keeney G, Lyke K, Ridlon J, White BA, French AJ, Thibodeau SN, Diener C, Resendis-Antonio O, Gransee J, Dutta T, Petterson XM, Sung J, Blekhman R, Boardman L, Larson D, Nelson H, Chia N.

Genome Med. 2018 Oct 31;10(1):78. doi: 10.1186/s13073-018-0586-6.

4.

EUS fine-needle pancreatic core biopsy can determine eligibility for tumor-agnostic immunotherapy.

Gleeson FC, Levy MJ, Roden AC, Boardman LA, Sinicrope FA, McWilliams RR, Zhang L.

Endosc Int Open. 2018 Oct;6(10):E1278-E1282. doi: 10.1055/a-0650-4447. Epub 2018 Oct 8.

5.

Association of telomere length with general cognitive trajectories: a meta-analysis of four prospective cohort studies.

Zhan Y, Clements MS, Roberts RO, Vassilaki M, Druliner BR, Boardman LA, Petersen RC, Reynolds CA, Pedersen NL, Hägg S.

Neurobiol Aging. 2018 Sep;69:111-116. doi: 10.1016/j.neurobiolaging.2018.05.004. Epub 2018 Jun 2.

PMID:
29870951
6.

Detection of Gastric Cancer with Novel Methylated DNA Markers: Discovery, Tissue Validation, and Pilot Testing in Plasma.

Anderson BW, Suh YS, Choi B, Lee HJ, Yab TC, Taylor WR, Dukek BA, Berger CK, Cao X, Foote PH, Devens ME, Boardman LA, Kisiel JB, Mahoney DW, Slettedahl SW, Allawi HT, Lidgard GP, Smyrk TC, Yang HK, Ahlquist DA.

Clin Cancer Res. 2018 Nov 15;24(22):5724-5734. doi: 10.1158/1078-0432.CCR-17-3364. Epub 2018 May 29.

PMID:
29844130
7.

Synthesis of multi-omic data and community metabolic models reveals insights into the role of hydrogen sulfide in colon cancer.

Hale VL, Jeraldo P, Mundy M, Yao J, Keeney G, Scott N, Cheek EH, Davidson J, Greene M, Martinez C, Lehman J, Pettry C, Reed E, Lyke K, White BA, Diener C, Resendis-Antonio O, Gransee J, Dutta T, Petterson XM, Boardman L, Larson D, Nelson H, Chia N.

Methods. 2018 Oct 1;149:59-68. doi: 10.1016/j.ymeth.2018.04.024. Epub 2018 Apr 26.

8.

Loss of ZG16 is associated with molecular and clinicopathological phenotypes of colorectal cancer.

Meng H, Li W, Boardman LA, Wang L.

BMC Cancer. 2018 Apr 16;18(1):433. doi: 10.1186/s12885-018-4337-2.

9.

Natural History of Established and De Novo Inflammatory Bowel Disease After Liver Transplantation for Primary Sclerosing Cholangitis.

Mouchli MA, Singh S, Boardman L, Bruining DH, Lightner AL, Rosen CB, Heimbach JK, Hasan B, Poterucha JJ, Watt KD, Kane SV, Raffals LE, Loftus EV Jr.

Inflamm Bowel Dis. 2018 Apr 23;24(5):1074-1081. doi: 10.1093/ibd/izx096.

10.

Colonoscopy surveillance for high risk polyps does not always prevent colorectal cancer.

Mouchli MA, Ouk L, Scheitel MR, Chaudhry AP, Felmlee-Devine D, Grill DE, Rashtak S, Wang P, Wang J, Chaudhry R, Smyrk TC, Oberg AL, Druliner BR, Boardman LA.

World J Gastroenterol. 2018 Feb 28;24(8):905-916. doi: 10.3748/wjg.v24.i8.905.

11.

Inferring modes of evolution from colorectal cancer with residual polyp of origin.

Kim M, Druliner BR, Vasmatzis N, Bae T, Chia N, Abyzov A, Boardman LA.

Oncotarget. 2017 Dec 26;9(6):6780-6792. doi: 10.18632/oncotarget.23687. eCollection 2018 Jan 23.

12.

Molecular characterization of colorectal adenomas with and without malignancy reveals distinguishing genome, transcriptome and methylome alterations.

Druliner BR, Wang P, Bae T, Baheti S, Slettedahl S, Mahoney D, Vasmatzis N, Xu H, Kim M, Bockol M, O'Brien D, Grill D, Warner N, Munoz-Gomez M, Kossick K, Johnson R, Mouchli M, Felmlee-Devine D, Washechek-Aletto J, Smyrk T, Oberg A, Wang J, Chia N, Abyzov A, Ahlquist D, Boardman LA.

Sci Rep. 2018 Feb 16;8(1):3161. doi: 10.1038/s41598-018-21525-4.

13.

Diagnosis and Treatment of Vulvar Dermatoses.

Stockdale CK, Boardman L.

Obstet Gynecol. 2018 Feb;131(2):371-386. doi: 10.1097/AOG.0000000000002460. Review.

PMID:
29324620
14.

A mutational comparison of adult and adolescent and young adult (AYA) colon cancer.

Tricoli JV, Boardman LA, Patidar R, Sindiri S, Jang JS, Walsh WD, McGregor PM 3rd, Camalier CE, Mehaffey MG, Furman WL, Bahrami A, Williams PM, Lih CJ, Conley BA, Khan J.

Cancer. 2018 Mar 1;124(5):1070-1082. doi: 10.1002/cncr.31136. Epub 2017 Nov 30.

15.

A transcriptomics assessment of oxygen-temperature interactions reveals novel candidate genes underlying variation in thermal tolerance and survival.

Boardman L, Mitchell KA, Terblanche JS, Sørensen JG.

J Insect Physiol. 2018 Apr;106(Pt 3):179-188. doi: 10.1016/j.jinsphys.2017.10.005. Epub 2017 Oct 13.

PMID:
29038013
16.

Draft Genome Sequence of Methanobrevibacter smithii Isolate WWM1085, Obtained from a Human Stool Sample.

Jennings ME, Chia N, Boardman LA, Metcalf WW.

Genome Announc. 2017 Sep 28;5(39). pii: e01055-17. doi: 10.1128/genomeA.01055-17.

17.

Early genetic aberrations in patients with sporadic colorectal cancer.

Druliner BR, Ruan X, Sicotte H, O'Brien D, Liu H, Kocher JA, Boardman L.

Mol Carcinog. 2018 Jan;57(1):114-124. doi: 10.1002/mc.22738. Epub 2017 Oct 18. Erratum in: Mol Carcinog. 2018 May;57(5):684.

18.

Moderate-to-severe obstructive sleep apnea is associated with telomere lengthening.

Polonis K, Somers VK, Becari C, Covassin N, Schulte PJ, Druliner BR, Johnson RA, Narkiewicz K, Boardman LA, Singh P.

Am J Physiol Heart Circ Physiol. 2017 Nov 1;313(5):H1022-H1030. doi: 10.1152/ajpheart.00197.2017. Epub 2017 Aug 19.

19.

Effects of nutrient and water restriction on thermal tolerance: A test of mechanisms and hypotheses.

Mitchell KA, Boardman L, Clusella-Trullas S, Terblanche JS.

Comp Biochem Physiol A Mol Integr Physiol. 2017 Oct;212:15-23. doi: 10.1016/j.cbpa.2017.06.019. Epub 2017 Jul 1.

PMID:
28676379
20.

Novel Approach to Fecal Occult Blood Testing by Assay of Erythrocyte-Specific microRNA Markers.

Wu CW, Cao X, Berger CK, Foote PH, Mahoney DW, Simonson JA, Anderson BW, Yab TC, Taylor WR, Boardman LA, Kisiel JB, Ahlquist DA.

Dig Dis Sci. 2017 Aug;62(8):1985-1994. doi: 10.1007/s10620-017-4627-6. Epub 2017 Jun 28.

21.

Telomere Length and Pancreatic Cancer Risk-Reply.

Antwi SO, Boardman LA, Petersen GM.

Cancer Epidemiol Biomarkers Prev. 2017 Jul;26(7):1158-1159. doi: 10.1158/1055-9965.EPI-17-0307. Epub 2017 Jun 20. No abstract available.

22.

Cell-free DNA copy number variations in plasma from colorectal cancer patients.

Li J, Dittmar RL, Xia S, Zhang H, Du M, Huang CC, Druliner BR, Boardman L, Wang L.

Mol Oncol. 2017 Aug;11(8):1099-1111. doi: 10.1002/1878-0261.12077. Epub 2017 Jun 6.

23.

Individualized Medicine in Gastroenterology and Hepatology.

Stephens MC, Boardman LA, Lazaridis KN.

Mayo Clin Proc. 2017 May;92(5):810-825. doi: 10.1016/j.mayocp.2017.03.002. Review.

PMID:
28473040
24.

Time Lapse to Colorectal Cancer: Telomere Dynamics Define the Malignant Potential of Polyps.

Druliner BR, Ruan X, Johnson R, Grill D, O'Brien D, Lai TP, Rashtak S, Felmlee-Devine D, Washechek-Aletto J, Malykh A, Smyrk T, Oberg A, Liu H, Shay JW, Ahlquist DA, Boardman LA.

Clin Transl Gastroenterol. 2017 Apr 13;8(4):e88. doi: 10.1038/ctg.2017.16. No abstract available.

25.

Peripheral Neutrophil to Lymphocyte Ratio Improves Prognostication in Colon Cancer.

Rashtak S, Ruan X, Druliner BR, Liu H, Therneau T, Mouchli M, Boardman LA.

Clin Colorectal Cancer. 2017 Jun;16(2):115-123.e3. doi: 10.1016/j.clcc.2017.01.008. Epub 2017 Jan 25.

26.

Risk Factors and Outcomes of De Novo Cancers (Excluding Nonmelanoma Skin Cancer) After Liver Transplantation for Primary Sclerosing Cholangitis.

Mouchli MA, Singh S, Loftus EV Jr, Boardman L, Talwalkar J, Rosen CB, Heimbach JK, Wiesner RH, Hasan B, Poterucha JJ, Kymberly WD.

Transplantation. 2017 Aug;101(8):1859-1866. doi: 10.1097/TP.0000000000001725.

27.

Genetically Predicted Telomere Length is not Associated with Pancreatic Cancer Risk.

Antwi SO, Bamlet WR, Broderick BT, Chaffee KG, Oberg A, Jatoi A, Boardman LA, Petersen GM.

Cancer Epidemiol Biomarkers Prev. 2017 Jun;26(6):971-974. doi: 10.1158/1055-9965.EPI-17-0100. Epub 2017 Mar 6.

28.

Shifts in the Fecal Microbiota Associated with Adenomatous Polyps.

Hale VL, Chen J, Johnson S, Harrington SC, Yab TC, Smyrk TC, Nelson H, Boardman LA, Druliner BR, Levin TR, Rex DK, Ahnen DJ, Lance P, Ahlquist DA, Chia N.

Cancer Epidemiol Biomarkers Prev. 2017 Jan;26(1):85-94. doi: 10.1158/1055-9965.EPI-16-0337. Epub 2016 Sep 26.

29.

Cold tolerance is unaffected by oxygen availability despite changes in anaerobic metabolism.

Boardman L, Sørensen JG, Koštál V, Šimek P, Terblanche JS.

Sci Rep. 2016 Sep 13;6:32856. doi: 10.1038/srep32856.

30.

Time Lapse to Colorectal Cancer: Telomere Dynamics Define the Malignant Potential of Polyps.

Druliner BR, Ruan X, Johnson R, Grill D, O'Brien D, Lai TP, Rashtak S, Felmlee-Devine D, Washechek-Aletto J, Malykh A, Smyrk T, Oberg A, Liu H, Shay JW, Ahlquist DA, Boardman LA.

Clin Transl Gastroenterol. 2016 Sep 1;7(9):e188. doi: 10.1038/ctg.2016.48.

31.

Colorectal Cancer with Residual Polyp of Origin: A Model of Malignant Transformation.

Druliner BR, Rashtak S, Ruan X, Bae T, Vasmatzis N, O'Brien D, Johnson R, Felmlee-Devine D, Washechek-Aletto J, Basu N, Liu H, Smyrk T, Abyzov A, Boardman LA.

Transl Oncol. 2016 Aug;9(4):280-6. doi: 10.1016/j.tranon.2016.06.002. Epub 2016 Jul 9.

32.

Telomere structure and maintenance gene variants and risk of five cancer types.

Karami S, Han Y, Pande M, Cheng I, Rudd J, Pierce BL, Nutter EL, Schumacher FR, Kote-Jarai Z, Lindstrom S, Witte JS, Fang S, Han J, Kraft P, Hunter DJ, Song F, Hung RJ, McKay J, Gruber SB, Chanock SJ, Risch A, Shen H, Haiman CA, Boardman L, Ulrich CM, Casey G, Peters U, Amin Al Olama A, Berchuck A, Berndt SI, Bezieau S, Brennan P, Brenner H, Brinton L, Caporaso N, Chan AT, Chang-Claude J, Christiani DC, Cunningham JM, Easton D, Eeles RA, Eisen T, Gala M, Gallinger SJ, Gayther SA, Goode EL, Grönberg H, Henderson BE, Houlston R, Joshi AD, Küry S, Landi MT, Le Marchand L, Muir K, Newcomb PA, Permuth-Wey J, Pharoah P, Phelan C, Potter JD, Ramus SJ, Risch H, Schildkraut J, Slattery ML, Song H, Wentzensen N, White E, Wiklund F, Zanke BW, Sellers TA, Zheng W, Chatterjee N, Amos CI, Doherty JA; GECCO and the GAME-ON Network: CORECT, DRIVE, ELLIPSE, FOCI, and TRICL.

Int J Cancer. 2016 Dec 15;139(12):2655-2670. doi: 10.1002/ijc.30288. Epub 2016 Sep 8.

33.

Capturing One of the Human Gut Microbiome's Most Wanted: Reconstructing the Genome of a Novel Butyrate-Producing, Clostridial Scavenger from Metagenomic Sequence Data.

Jeraldo P, Hernandez A, Nielsen HB, Chen X, White BA, Goldenfeld N, Nelson H, Alhquist D, Boardman L, Chia N.

Front Microbiol. 2016 May 26;7:783. doi: 10.3389/fmicb.2016.00783. eCollection 2016.

34.

The closed spiracle phase of discontinuous gas exchange predicts diving duration in the grasshopper Paracinema tricolor.

Gudowska A, Boardman L, Terblanche JS.

J Exp Biol. 2016 Aug 15;219(Pt 16):2423-5. doi: 10.1242/jeb.135129. Epub 2016 Jun 13.

35.

Corrigendum to "Physiological and molecular mechanisms associated with cross tolerance between hypoxia and low temperature in Thaumatotibia leucotreta" [J. Insect Physiol. 82 (2015) 75-84].

Boardman L, Sørensen JG, Terblanche JS.

J Insect Physiol. 2016 Jul;90:59-61. doi: 10.1016/j.jinsphys.2016.05.004. Epub 2016 May 31. No abstract available.

PMID:
27260473
36.

Pouchitis Is a Common Complication in Patients With Familial Adenomatous Polyposis Following Ileal Pouch-Anal Anastomosis.

Quinn KP, Lightner AL, Pendegraft RS, Enders FT, Boardman LA, Raffals LE.

Clin Gastroenterol Hepatol. 2016 Sep;14(9):1296-301. doi: 10.1016/j.cgh.2016.04.010. Epub 2016 Apr 13.

PMID:
27085760
37.

The speed and metabolic cost of digesting a blood meal depends on temperature in a major disease vector.

McCue MD, Boardman L, Clusella-Trullas S, Kleynhans E, Terblanche JS.

J Exp Biol. 2016 Jun 15;219(Pt 12):1893-902. doi: 10.1242/jeb.138669. Epub 2016 Apr 8.

38.
39.

Clinical and molecular features of young-onset colorectal cancer.

Ballester V, Rashtak S, Boardman L.

World J Gastroenterol. 2016 Feb 7;22(5):1736-44. doi: 10.3748/wjg.v22.i5.1736. Review.

40.

Biologic and clinical characteristics of adolescent and young adult cancers: Acute lymphoblastic leukemia, colorectal cancer, breast cancer, melanoma, and sarcoma.

Tricoli JV, Blair DG, Anders CK, Bleyer WA, Boardman LA, Khan J, Kummar S, Hayes-Lattin B, Hunger SP, Merchant M, Seibel NL, Thurin M, Willman CL.

Cancer. 2016 Apr 1;122(7):1017-28. doi: 10.1002/cncr.29871. Epub 2016 Feb 5. Review.

41.

Plasma extracellular RNA profiles in healthy and cancer patients.

Yuan T, Huang X, Woodcock M, Du M, Dittmar R, Wang Y, Tsai S, Kohli M, Boardman L, Patel T, Wang L.

Sci Rep. 2016 Jan 20;6:19413. doi: 10.1038/srep19413.

42.

Comprehensive nucleosome mapping of the human genome in cancer progression.

Druliner BR, Vera D, Johnson R, Ruan X, Apone LM, Dimalanta ET, Stewart FJ, Boardman L, Dennis JH.

Oncotarget. 2016 Mar 22;7(12):13429-45. doi: 10.18632/oncotarget.6811.

43.

A common variant in MTHFR influences response to chemoradiotherapy and recurrence of rectal cancer.

Nikas JB, Lee JT, Maring ED, Washechek-Aletto J, Felmlee-Devine D, Johnson RA, Smyrk TC, Tawadros PS, Boardman LA, Steer CJ.

Am J Cancer Res. 2015 Sep 15;5(10):3231-40. eCollection 2015.

44.

Does oxygen limit thermal tolerance in arthropods? A critical review of current evidence.

Verberk WC, Overgaard J, Ern R, Bayley M, Wang T, Boardman L, Terblanche JS.

Comp Biochem Physiol A Mol Integr Physiol. 2016 Feb;192:64-78. doi: 10.1016/j.cbpa.2015.10.020. Epub 2015 Oct 24. Review.

45.

DNA damage-induced ephrin-B2 reverse signaling promotes chemoresistance and drives EMT in colorectal carcinoma harboring mutant p53.

Alam SK, Yadav VK, Bajaj S, Datta A, Dutta SK, Bhattacharyya M, Bhattacharya S, Debnath S, Roy S, Boardman LA, Smyrk TC, Molina JR, Chakrabarti S, Chowdhury S, Mukhopadhyay D, Roychoudhury S.

Cell Death Differ. 2016 Apr;23(4):707-22. doi: 10.1038/cdd.2015.133. Epub 2015 Oct 23.

46.

Physiological and molecular mechanisms associated with cross tolerance between hypoxia and low temperature in Thaumatotibia leucotreta.

Boardman L, Sørensen JG, Terblanche JS.

J Insect Physiol. 2015 Nov;82:75-84. doi: 10.1016/j.jinsphys.2015.09.001. Epub 2015 Sep 12.

PMID:
26376454
47.

What Is New in Human Papillomavirus-Related Lower Anogenital Tract Disease Prevention and Screening?: Best Articles From the Past Year.

Boardman LA.

Obstet Gynecol. 2015 Oct;126(4):892-4. doi: 10.1097/AOG.0000000000001081.

PMID:
26348170
48.

Next Generation Multigene Panel Testing: The Next Step for Identification of Hereditary Colorectal Cancer Syndromes?

Ballester V, Boardman L.

Gastroenterology. 2015 Sep;149(3):526-8. doi: 10.1053/j.gastro.2015.07.025. Epub 2015 Jul 27. No abstract available.

PMID:
26226575
49.

Screening for Anal Cancer in Women.

Moscicki AB, Darragh TM, Berry-Lawhorn JM, Roberts JM, Khan MJ, Boardman LA, Chiao E, Einstein MH, Goldstone SE, Jay N, Likes WM, Stier EA, Welton ML, Wiley DJ, Palefsky JM.

J Low Genit Tract Dis. 2015 Jul;19(3 Suppl 1):S27-42. doi: 10.1097/LGT.0000000000000117. Review.

50.

Aspirin Prevents Colorectal Cancer by Normalizing EGFR Expression.

Li H, Zhu F, Boardman LA, Wang L, Oi N, Liu K, Li X, Fu Y, Limburg PJ, Bode AM, Dong Z.

EBioMedicine. 2015 May 1;2(5):447-455.

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