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Items: 1 to 50 of 58

1.

Fatal disseminated Rasamsonia infection in cystic fibrosis post-lung transplantation.

Hong G, White M, Lechtzin N, West NE, Avery R, Miller H, Lee R, Lovari RJ, Massire C, Blyn LB, Liang X, Sutton DA, Fu J, Wickes BL, Wiederhold NP, Zhang SX.

J Cyst Fibros. 2017 Mar;16(2):e3-e7. doi: 10.1016/j.jcf.2017.01.005. Epub 2017 Feb 6.

2.

The IRIDICA BAC BSI Assay: Rapid, Sensitive and Culture-Independent Identification of Bacteria and Candida in Blood.

Metzgar D, Frinder MW, Rothman RE, Peterson S, Carroll KC, Zhang SX, Avornu GD, Rounds MA, Carolan HE, Toleno DM, Moore D, Hall TA, Massire C, Richmond GS, Gutierrez JR, Sampath R, Ecker DJ, Blyn LB.

PLoS One. 2016 Jul 6;11(7):e0158186. doi: 10.1371/journal.pone.0158186. eCollection 2016.

3.

Improved sensitivity for molecular detection of bacterial and Candida infections in blood.

Bacconi A, Richmond GS, Baroldi MA, Laffler TG, Blyn LB, Carolan HE, Frinder MR, Toleno DM, Metzgar D, Gutierrez JR, Massire C, Rounds M, Kennel NJ, Rothman RE, Peterson S, Carroll KC, Wakefield T, Ecker DJ, Sampath R.

J Clin Microbiol. 2014 Sep;52(9):3164-74. doi: 10.1128/JCM.00801-14. Epub 2014 Jun 20.

4.

Analytical characterization of an assay designed to detect and identify diverse agents of disseminated viral infection.

Metzgar D, Lovari R, Ray K, Baynes D, Drapp D, Frinder M, Vijesurier R, Stemler M, Ofsaiof R, Carolan H, Welk J, Toleno D, Ranken R, Hall TA, Massire C, Sampath R, Blyn LB, Goveia J, Schneider G.

J Clin Virol. 2014 Mar;59(3):177-83. doi: 10.1016/j.jcv.2013.12.005. Epub 2013 Dec 29.

PMID:
24440177
5.

Rapid PCR/ESI-MS-based molecular genotyping of Staphylococcus aureus from nasal swabs of emergency department patients.

Kecojevic A, Ranken R, Ecker DJ, Massire C, Sampath R, Blyn LB, Hsieh YH, Rothman RE, Gaydos CA.

BMC Infect Dis. 2014 Jan 9;14:16. doi: 10.1186/1471-2334-14-16.

6.

Enhanced diagnostic yields of bacteremia and candidemia in blood specimens by PCR-electrospray ionization mass spectrometry.

Laffler TG, Cummins LL, McClain CM, Quinn CD, Toro MA, Carolan HE, Toleno DM, Rounds MA, Eshoo MW, Stratton CW, Sampath R, Blyn LB, Ecker DJ, Tang YW.

J Clin Microbiol. 2013 Nov;51(11):3535-41. doi: 10.1128/JCM.00876-13. Epub 2013 Aug 21.

7.

Broad-spectrum biosensor capable of detecting and identifying diverse bacterial and Candida species in blood.

Metzgar D, Frinder M, Lovari R, Toleno D, Massire C, Blyn LB, Ranken R, Carolan HE, Hall TA, Moore D, Hansen CJ, Sampath R, Ecker DJ.

J Clin Microbiol. 2013 Aug;51(8):2670-8. doi: 10.1128/JCM.00966-13. Epub 2013 Jun 12.

8.

Rapid diagnosis of bloodstream infections with PCR followed by mass spectrometry.

Jordana-Lluch E, Carolan HE, Giménez M, Sampath R, Ecker DJ, Quesada MD, Mòdol JM, Arméstar F, Blyn LB, Cummins LL, Ausina V, Martró E.

PLoS One. 2013 Apr 23;8(4):e62108. doi: 10.1371/journal.pone.0062108. Print 2013.

9.

PCR followed by electrospray ionization mass spectrometry for broad-range identification of fungal pathogens.

Massire C, Buelow DR, Zhang SX, Lovari R, Matthews HE, Toleno DM, Ranken RR, Hall TA, Metzgar D, Sampath R, Blyn LB, Ecker DJ, Gu Z, Walsh TJ, Hayden RT.

J Clin Microbiol. 2013 Mar;51(3):959-66. doi: 10.1128/JCM.02621-12. Epub 2013 Jan 9.

10.

Identification and typing of Francisella tularensis with a highly automated genotyping assay.

Duncan DD, Vogler AJ, Wolcott MJ, Li F, Sarovich DS, Birdsell DN, Watson LM, Hall TA, Sampath R, Housley R, Blyn LB, Hofstadler SA, Ecker DJ, Keim P, Wagner DM, Eshoo MW.

Lett Appl Microbiol. 2013 Feb;56(2):128-34. doi: 10.1111/lam.12022. Epub 2012 Nov 28.

11.

Comparative analysis of two broad-range PCR assays for pathogen detection in positive-blood-culture bottles: PCR-high-resolution melting analysis versus PCR-mass spectrometry.

Jeng K, Gaydos CA, Blyn LB, Yang S, Won H, Matthews H, Toleno D, Hsieh YH, Carroll KC, Hardick J, Masek B, Kecojevic A, Sampath R, Peterson S, Rothman RE.

J Clin Microbiol. 2012 Oct;50(10):3287-92. doi: 10.1128/JCM.00677-12. Epub 2012 Aug 1.

12.

Comprehensive biothreat cluster identification by PCR/electrospray-ionization mass spectrometry.

Sampath R, Mulholland N, Blyn LB, Massire C, Whitehouse CA, Waybright N, Harter C, Bogan J, Miranda MS, Smith D, Baldwin C, Wolcott M, Norwood D, Kreft R, Frinder M, Lovari R, Yasuda I, Matthews H, Toleno D, Housley R, Duncan D, Li F, Warren R, Eshoo MW, Hall TA, Hofstadler SA, Ecker DJ.

PLoS One. 2012;7(6):e36528. doi: 10.1371/journal.pone.0036528. Epub 2012 Jun 29.

13.

Monitoring seasonal influenza A evolution: rapid 2009 pandemic H1N1 surveillance with an reverse transcription-polymerase chain reaction/electro-spray ionization mass spectrometry assay.

Jeng K, Massire C, Zembower TR, Deyde VM, Gubareva LV, Hsieh YH, Rothman RE, Sampath R, Penugonda S, Metzgar D, Blyn LB, Hardick J, Gaydos CA.

J Clin Virol. 2012 Aug;54(4):332-6. doi: 10.1016/j.jcv.2012.05.002. Epub 2012 Jun 4.

14.

Concurrent serotyping and genotyping of pneumococci by use of PCR and electrospray ionization mass spectrometry.

Massire C, Gertz RE Jr, Svoboda P, Levert K, Reed MS, Pohl J, Kreft R, Li F, White N, Ranken R, Blyn LB, Ecker DJ, Sampath R, Beall B.

J Clin Microbiol. 2012 Jun;50(6):2018-25. doi: 10.1128/JCM.06735-11. Epub 2012 Mar 21.

15.

Molecular characterization of drug-resistant Mycobacterium tuberculosis isolates circulating in China by multilocus PCR and electrospray ionization mass spectrometry.

Wang F, Massire C, Li H, Cummins LL, Li F, Jin J, Fan X, Wang S, Shao L, Zhang S, Meng S, Wu J, Lu C, Blyn LB, Sampath R, Ecker DJ, Zhang W, Tang YW.

J Clin Microbiol. 2011 Jul;49(7):2719-21. doi: 10.1128/JCM.00317-11. Epub 2011 Apr 27.

16.

Rapid molecular assays for microbial contaminant monitoring in the bioprocess industry.

Sampath R, Blyn LB, Ecker DJ.

PDA J Pharm Sci Technol. 2010 Sep-Oct;64(5):458-64.

PMID:
21502053
17.

Simultaneous identification of mycobacterial isolates to the species level and determination of tuberculosis drug resistance by PCR followed by electrospray ionization mass spectrometry.

Massire C, Ivy CA, Lovari R, Kurepina N, Li H, Blyn LB, Hofstadler SA, Khechinashvili G, Stratton CW, Sampath R, Tang YW, Ecker DJ, Kreiswirth BN.

J Clin Microbiol. 2011 Mar;49(3):908-17. doi: 10.1128/JCM.01578-10. Epub 2010 Dec 29.

18.

Pyoderma gangrenosum-like ulcer in a patient with X-linked agammaglobulinemia: identification of Helicobacter bilis by mass spectrometry analysis.

Murray PR, Jain A, Uzel G, Ranken R, Ivy C, Blyn LB, Ecker DJ, Sampath R, Lee CC, Turner ML.

Arch Dermatol. 2010 May;146(5):523-6. doi: 10.1001/archdermatol.2010.86.

19.

New technology for rapid molecular diagnosis of bloodstream infections.

Ecker DJ, Sampath R, Li H, Massire C, Matthews HE, Toleno D, Hall TA, Blyn LB, Eshoo MW, Ranken R, Hofstadler SA, Tang YW.

Expert Rev Mol Diagn. 2010 May;10(4):399-415. doi: 10.1586/erm.10.24.

PMID:
20465496
20.

Rapid identification of vector-borne flaviviruses by mass spectrometry.

Grant-Klein RJ, Baldwin CD, Turell MJ, Rossi CA, Li F, Lovari R, Crowder CD, Matthews HE, Rounds MA, Eshoo MW, Blyn LB, Ecker DJ, Sampath R, Whitehouse CA.

Mol Cell Probes. 2010 Aug;24(4):219-28. doi: 10.1016/j.mcp.2010.04.003. Epub 2010 Apr 20.

PMID:
20412852
21.

Application of the Ibis-T5000 pan-Orthopoxvirus assay to quantitatively detect monkeypox viral loads in clinical specimens from macaques experimentally infected with aerosolized monkeypox virus.

Grant RJ, Baldwin CD, Nalca A, Zoll S, Blyn LB, Eshoo MW, Matthews H, Sampath R, Whitehouse CA.

Am J Trop Med Hyg. 2010 Feb;82(2):318-23. doi: 10.4269/ajtmh.2010.09-0361.

22.

Identification of pathogenic Vibrio species by multilocus PCR-electrospray ionization mass spectrometry and its application to aquatic environments of the former soviet republic of Georgia.

Whitehouse CA, Baldwin C, Sampath R, Blyn LB, Melton R, Li F, Hall TA, Harpin V, Matthews H, Tediashvili M, Jaiani E, Kokashvili T, Janelidze N, Grim C, Colwell RR, Huq A.

Appl Environ Microbiol. 2010 Mar;76(6):1996-2001. doi: 10.1128/AEM.01919-09. Epub 2010 Jan 29.

23.

Detection and identification of Ehrlichia species in blood by use of PCR and electrospray ionization mass spectrometry.

Eshoo MW, Crowder CD, Li H, Matthews HE, Meng S, Sefers SE, Sampath R, Stratton CW, Blyn LB, Ecker DJ, Tang YW.

J Clin Microbiol. 2010 Feb;48(2):472-8. doi: 10.1128/JCM.01669-09. Epub 2009 Dec 2.

24.

Pathogen profiling: rapid molecular characterization of Staphylococcus aureus by PCR/electrospray ionization-mass spectrometry and correlation with phenotype.

Wolk DM, Blyn LB, Hall TA, Sampath R, Ranken R, Ivy C, Melton R, Matthews H, White N, Li F, Harpin V, Ecker DJ, Limbago B, McDougal LK, Wysocki VH, Cai M, Carroll KC.

J Clin Microbiol. 2009 Oct;47(10):3129-37. doi: 10.1128/JCM.00709-09. Epub 2009 Aug 26.

25.

Rapid and high-throughput pan-Orthopoxvirus detection and identification using PCR and mass spectrometry.

Eshoo MW, Whitehouse CA, Nalca A, Zoll S, Ecker JA, Hall TA, Pennella TT, Duncan DD, Desai A, Moradi EK, Rudnick K, Libby B, Ranken R, Sampath R, Hofstadler SA, Ecker DJ, Blyn LB.

PLoS One. 2009 Jul 22;4(7):e6342. doi: 10.1371/journal.pone.0006342.

26.

Molecular genotyping of microbes by multilocus PCR and mass spectrometry: a new tool for hospital infection control and public health surveillance.

Ecker DJ, Massire C, Blyn LB, Hofstadler SA, Hannis JC, Eshoo MW, Hall TA, Sampath R.

Methods Mol Biol. 2009;551:71-87. doi: 10.1007/978-1-60327-999-4_7.

PMID:
19521868
27.

Rapid molecular genotyping and clonal complex assignment of Staphylococcus aureus isolates by PCR coupled to electrospray ionization-mass spectrometry.

Hall TA, Sampath R, Blyn LB, Ranken R, Ivy C, Melton R, Matthews H, White N, Li F, Harpin V, Ecker DJ, McDougal LK, Limbago B, Ross T, Wolk DM, Wysocki V, Carroll KC.

J Clin Microbiol. 2009 Jun;47(6):1733-41. doi: 10.1128/JCM.02175-08. Epub 2009 Mar 18.

28.

Rapid determination of quinolone resistance in Acinetobacter spp.

Hujer KM, Hujer AM, Endimiani A, Thomson JM, Adams MD, Goglin K, Rather PN, Pennella TT, Massire C, Eshoo MW, Sampath R, Blyn LB, Ecker DJ, Bonomo RA.

J Clin Microbiol. 2009 May;47(5):1436-42. doi: 10.1128/JCM.02380-08. Epub 2009 Mar 18.

29.

Usefulness of multilocus polymerase chain reaction followed by electrospray ionization mass spectrometry to identify a diverse panel of bacterial isolates.

Baldwin CD, Howe GB, Sampath R, Blyn LB, Matthews H, Harpin V, Hall TA, Drader JJ, Hofstadler SA, Eshoo MW, Rudnick K, Studarus K, Moore D, Abbott S, Janda JM, Whitehouse CA.

Diagn Microbiol Infect Dis. 2009 Apr;63(4):403-8. doi: 10.1016/j.diagmicrobio.2008.12.012. Epub 2009 Feb 18.

PMID:
19232863
30.

Occurrence, distribution, and origins of Streptococcus pneumoniae Serotype 6C, a recently recognized serotype.

Jacobs MR, Bajaksouzian S, Bonomo RA, Good CE, Windau AR, Hujer AM, Massire C, Melton R, Blyn LB, Ecker DJ, Sampath R.

J Clin Microbiol. 2009 Jan;47(1):64-72. doi: 10.1128/JCM.01524-08. Epub 2008 Oct 29.

31.

Ibis T5000: a universal biosensor approach for microbiology.

Ecker DJ, Sampath R, Massire C, Blyn LB, Hall TA, Eshoo MW, Hofstadler SA.

Nat Rev Microbiol. 2008 Jul;6(7):553-8. doi: 10.1038/nrmicro1918. Epub 2008 Jun 3. Review.

PMID:
18521073
32.

High-resolution genotyping of Campylobacter species by use of PCR and high-throughput mass spectrometry.

Hannis JC, Manalili SM, Hall TA, Ranken R, White N, Sampath R, Blyn LB, Ecker DJ, Mandrell RE, Fagerquist CK, Bates AH, Miller WG, Hofstadler SA.

J Clin Microbiol. 2008 Apr;46(4):1220-5. doi: 10.1128/JCM.02158-07. Epub 2008 Feb 13.

33.

Rapid detection and molecular serotyping of adenovirus by use of PCR followed by electrospray ionization mass spectrometry.

Blyn LB, Hall TA, Libby B, Ranken R, Sampath R, Rudnick K, Moradi E, Desai A, Metzgar D, Russell KL, Freed NE, Balansay M, Broderick MP, Osuna MA, Hofstadler SA, Ecker DJ.

J Clin Microbiol. 2008 Feb;46(2):644-51. Epub 2007 Dec 19.

34.

Direct broad-range detection of alphaviruses in mosquito extracts.

Eshoo MW, Whitehouse CA, Zoll ST, Massire C, Pennella TT, Blyn LB, Sampath R, Hall TA, Ecker JA, Desai A, Wasieloski LP, Li F, Turell MJ, Schink A, Rudnick K, Otero G, Weaver SC, Ludwig GV, Hofstadler SA, Ecker DJ.

Virology. 2007 Nov 25;368(2):286-95. Epub 2007 Jul 25.

35.

Global surveillance of emerging Influenza virus genotypes by mass spectrometry.

Sampath R, Russell KL, Massire C, Eshoo MW, Harpin V, Blyn LB, Melton R, Ivy C, Pennella T, Li F, Levene H, Hall TA, Libby B, Fan N, Walcott DJ, Ranken R, Pear M, Schink A, Gutierrez J, Drader J, Moore D, Metzgar D, Addington L, Rothman R, Gaydos CA, Yang S, St George K, Fuschino ME, Dean AB, Stallknecht DE, Goekjian G, Yingst S, Monteville M, Saad MD, Whitehouse CA, Baldwin C, Rudnick KH, Hofstadler SA, Lemon SM, Ecker DJ.

PLoS One. 2007 May 30;2(5):e489.

36.

Rapid identification of emerging infectious agents using PCR and electrospray ionization mass spectrometry.

Sampath R, Hall TA, Massire C, Li F, Blyn LB, Eshoo MW, Hofstadler SA, Ecker DJ.

Ann N Y Acad Sci. 2007 Apr;1102:109-20. Review.

PMID:
17470915
37.

Transmission dynamics and prospective environmental sampling of adenovirus in a military recruit setting.

Russell KL, Broderick MP, Franklin SE, Blyn LB, Freed NE, Moradi E, Ecker DJ, Kammerer PE, Osuna MA, Kajon AE, Morn CB, Ryan MA.

J Infect Dis. 2006 Oct 1;194(7):877-85. Epub 2006 Aug 25.

PMID:
16960774
38.

Identification of Acinetobacter species and genotyping of Acinetobacter baumannii by multilocus PCR and mass spectrometry.

Ecker JA, Massire C, Hall TA, Ranken R, Pennella TT, Agasino Ivy C, Blyn LB, Hofstadler SA, Endy TP, Scott PT, Lindler L, Hamilton T, Gaddy C, Snow K, Pe M, Fishbain J, Craft D, Deye G, Riddell S, Milstrey E, Petruccelli B, Brisse S, Harpin V, Schink A, Ecker DJ, Sampath R, Eshoo MW.

J Clin Microbiol. 2006 Aug;44(8):2921-32.

39.

Rapid identification and strain-typing of respiratory pathogens for epidemic surveillance.

Ecker DJ, Sampath R, Blyn LB, Eshoo MW, Ivy C, Ecker JA, Libby B, Samant V, Sannes-Lowery KA, Melton RE, Russell K, Freed N, Barrozo C, Wu J, Rudnick K, Desai A, Moradi E, Knize DJ, Robbins DW, Hannis JC, Harrell PM, Massire C, Hall TA, Jiang Y, Ranken R, Drader JJ, White N, McNeil JA, Crooke ST, Hofstadler SA.

Proc Natl Acad Sci U S A. 2005 May 31;102(22):8012-7. Epub 2005 May 23.

40.

Rapid identification of emerging pathogens: coronavirus.

Sampath R, Hofstadler SA, Blyn LB, Eshoo MW, Hall TA, Massire C, Levene HM, Hannis JC, Harrell PM, Neuman B, Buchmeier MJ, Jiang Y, Ranken R, Drader JJ, Samant V, Griffey RH, McNeil JA, Crooke ST, Ecker DJ.

Emerg Infect Dis. 2005 Mar;11(3):373-9.

41.

MicC, a second small-RNA regulator of Omp protein expression in Escherichia coli.

Chen S, Zhang A, Blyn LB, Storz G.

J Bacteriol. 2004 Oct;186(20):6689-97.

42.

Multitarget affinity/specificity screening of natural products: finding and characterizing high-affinity ligands from complex mixtures by using high-performance mass spectrometry.

Cummins LL, Chen S, Blyn LB, Sannes-Lowery KA, Drader JJ, Griffey RH, Hofstadler SA.

J Nat Prod. 2003 Sep;66(9):1186-90.

PMID:
14510594
43.

Antibacterial activity of quinolone-macrocycle conjugates.

Jefferson EA, Swayze EE, Osgood SA, Miyaji A, Risen LM, Blyn LB.

Bioorg Med Chem Lett. 2003 May 19;13(10):1635-8.

PMID:
12729630
44.

SAR by MS: a ligand based technique for drug lead discovery against structured RNA targets.

Swayze EE, Jefferson EA, Sannes-Lowery KA, Blyn LB, Risen LM, Arakawa S, Osgood SA, Hofstadler SA, Griffey RH.

J Med Chem. 2002 Aug 29;45(18):3816-9.

PMID:
12190303
45.

New inhibitors of bacterial protein synthesis from a combinatorial library of macrocycles.

Jefferson EA, Arakawa S, Blyn LB, Miyaji A, Osgood SA, Ranken R, Risen LM, Swayze EE.

J Med Chem. 2002 Aug 1;45(16):3430-9.

PMID:
12139453
46.

A bioinformatics based approach to discover small RNA genes in the Escherichia coli genome.

Chen S, Lesnik EA, Hall TA, Sampath R, Griffey RH, Ecker DJ, Blyn LB.

Biosystems. 2002 Mar-May;65(2-3):157-77.

PMID:
12069726
47.
48.

Structure-activity relationships of novel 2-substituted quinazoline antibacterial agents.

Kung PP, Casper MD, Cook KL, Wilson-Lingardo L, Risen LM, Vickers TA, Ranken R, Blyn LB, Wyatt JR, Cook PD, Ecker DJ.

J Med Chem. 1999 Nov 4;42(22):4705-13.

PMID:
10579832
49.
50.

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