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Items: 41

1.

Emergent Protective Organogenesis in Date Palms: A Morpho-devo-dynamic Adaptive Strategy During Early Development.

Xiao T, Raygoza AA, Pérez JC, Kirschner G, Deng Y, Atkinson B, Sturrock C, Lube V, Wang JY, Lubineau G, Al-Babili S, Ramírez LAC, Bennett MJ, Blilou I.

Plant Cell. 2019 May 29. pii: tpc.00008.2019. doi: 10.1105/tpc.19.00008. [Epub ahead of print]

2.

A Jasmonate Signaling Network Activates Root Stem Cells and Promotes Regeneration.

Zhou W, Lozano-Torres JL, Blilou I, Zhang X, Zhai Q, Smant G, Li C, Scheres B.

Cell. 2019 May 2;177(4):942-956.e14. doi: 10.1016/j.cell.2019.03.006. Epub 2019 Apr 4.

PMID:
30955889
3.

The apocarotenoid metabolite zaxinone regulates growth and strigolactone biosynthesis in rice.

Wang JY, Haider I, Jamil M, Fiorilli V, Saito Y, Mi J, Baz L, Kountche BA, Jia KP, Guo X, Balakrishna A, Ntui VO, Reinke B, Volpe V, Gojobori T, Blilou I, Lanfranco L, Bonfante P, Al-Babili S.

Nat Commun. 2019 Feb 18;10(1):810. doi: 10.1038/s41467-019-08461-1.

4.

INDETERMINATE-DOMAIN 4 (IDD4) coordinates immune responses with plant-growth in Arabidopsis thaliana.

Völz R, Kim SK, Mi J, Rawat AA, Veluchamy A, Mariappan KG, Rayapuram N, Daviere JM, Achard P, Blilou I, Al-Babili S, Benhamed M, Hirt H.

PLoS Pathog. 2019 Jan 24;15(1):e1007499. doi: 10.1371/journal.ppat.1007499. eCollection 2019 Jan.

5.

The Arabidopsis DWARF27 gene encodes an all-trans-/9-cis-β-carotene isomerase and is induced by auxin, abscisic acid and phosphate deficiency.

Abuauf H, Haider I, Jia KP, Ablazov A, Mi J, Blilou I, Al-Babili S.

Plant Sci. 2018 Dec;277:33-42. doi: 10.1016/j.plantsci.2018.06.024. Epub 2018 Sep 11.

PMID:
30466598
6.

The Arabidopsis homolog of human G3BP1 is a key regulator of stomatal and apoplastic immunity.

Abulfaraj AA, Mariappan K, Bigeard J, Manickam P, Blilou I, Guo X, Al-Babili S, Pflieger D, Hirt H, Rayapuram N.

Life Sci Alliance. 2018 May 31;1(2):e201800046. doi: 10.26508/lsa.201800046. eCollection 2018 May.

7.

Root stem cell niche organizer specification by molecular convergence of PLETHORA and SCARECROW transcription factor modules.

Shimotohno A, Heidstra R, Blilou I, Scheres B.

Genes Dev. 2018 Aug 1;32(15-16):1085-1100. doi: 10.1101/gad.314096.118. Epub 2018 Jul 17.

8.

Optimizing FRET-FLIM Labeling Conditions to Detect Nuclear Protein Interactions at Native Expression Levels in Living Arabidopsis Roots.

Long Y, Stahl Y, Weidtkamp-Peters S, Smet W, Du Y, Gadella TWJ Jr, Goedhart J, Scheres B, Blilou I.

Front Plant Sci. 2018 May 15;9:639. doi: 10.3389/fpls.2018.00639. eCollection 2018.

9.

A computational framework for cortical microtubule dynamics in realistically shaped plant cells.

Chakrabortty B, Blilou I, Scheres B, Mulder BM.

PLoS Comput Biol. 2018 Feb 2;14(2):e1005959. doi: 10.1371/journal.pcbi.1005959. eCollection 2018 Feb.

10.

Role of Tulipa gesneriana TEOSINTE BRANCHED1 (TgTB1) in the control of axillary bud outgrowth in bulbs.

Moreno-Pachon NM, Mutimawurugo MC, Heynen E, Sergeeva L, Benders A, Blilou I, Hilhorst HWM, Immink RGH.

Plant Reprod. 2018 Jun;31(2):145-157. doi: 10.1007/s00497-017-0316-z. Epub 2017 Dec 7.

11.

Transcription Factor-Mediated Control of Anthocyanin Biosynthesis in Vegetative Tissues.

Outchkourov NS, Karlova R, Hölscher M, Schrama X, Blilou I, Jongedijk E, Simon CD, van Dijk ADJ, Bosch D, Hall RD, Beekwilder J.

Plant Physiol. 2018 Feb;176(2):1862-1878. doi: 10.1104/pp.17.01662. Epub 2017 Nov 30.

12.

In vivo FRET-FLIM reveals cell-type-specific protein interactions in Arabidopsis roots.

Long Y, Stahl Y, Weidtkamp-Peters S, Postma M, Zhou W, Goedhart J, Sánchez-Pérez MI, Gadella TWJ, Simon R, Scheres B, Blilou I.

Nature. 2017 Aug 3;548(7665):97-102. doi: 10.1038/nature23317. Epub 2017 Jul 26.

PMID:
28746306
13.

Analysis of a Plant Transcriptional Regulatory Network Using Transient Expression Systems.

Díaz-Triviño S, Long Y, Scheres B, Blilou I.

Methods Mol Biol. 2017;1629:83-103. doi: 10.1007/978-1-4939-7125-1_7.

PMID:
28623581
14.

Arabidopsis RETINOBLASTOMA RELATED directly regulates DNA damage responses through functions beyond cell cycle control.

Horvath BM, Kourova H, Nagy S, Nemeth E, Magyar Z, Papdi C, Ahmad Z, Sanchez-Perez GF, Perilli S, Blilou I, Pettkó-Szandtner A, Darula Z, Meszaros T, Binarova P, Bogre L, Scheres B.

EMBO J. 2017 May 2;36(9):1261-1278. doi: 10.15252/embj.201694561. Epub 2017 Mar 20.

15.

Tracking transcription factor mobility and interaction in Arabidopsis roots with fluorescence correlation spectroscopy.

Clark NM, Hinde E, Winter CM, Fisher AP, Crosti G, Blilou I, Gratton E, Benfey PN, Sozzani R.

Elife. 2016 Jun 11;5. pii: e14770. doi: 10.7554/eLife.14770.

16.

Transcriptional control of tissue formation throughout root development.

Moreno-Risueno MA, Sozzani R, Yardımcı GG, Petricka JJ, Vernoux T, Blilou I, Alonso J, Winter CM, Ohler U, Scheres B, Benfey PN.

Science. 2015 Oct 23;350(6259):426-30. doi: 10.1126/science.aad1171.

17.

SCARECROW-LIKE23 and SCARECROW jointly specify endodermal cell fate but distinctly control SHORT-ROOT movement.

Long Y, Goedhart J, Schneijderberg M, Terpstra I, Shimotohno A, Bouchet BP, Akhmanova A, Gadella TW Jr, Heidstra R, Scheres B, Blilou I.

Plant J. 2015 Nov;84(4):773-84. doi: 10.1111/tpj.13038.

18.

Oasis desert farming selects environment-specific date palm root endophytic communities and cultivable bacteria that promote resistance to drought.

Cherif H, Marasco R, Rolli E, Ferjani R, Fusi M, Soussi A, Mapelli F, Blilou I, Borin S, Boudabous A, Cherif A, Daffonchio D, Ouzari H.

Environ Microbiol Rep. 2015 Aug;7(4):668-78. doi: 10.1111/1758-2229.12304.

PMID:
26033617
19.

Arabidopsis BIRD Zinc Finger Proteins Jointly Stabilize Tissue Boundaries by Confining the Cell Fate Regulator SHORT-ROOT and Contributing to Fate Specification.

Long Y, Smet W, Cruz-Ramírez A, Castelijns B, de Jonge W, Mähönen AP, Bouchet BP, Perez GS, Akhmanova A, Scheres B, Blilou I.

Plant Cell. 2015 Apr;27(4):1185-99. doi: 10.1105/tpc.114.132407. Epub 2015 Mar 31.

20.

The logic of communication: roles for mobile transcription factors in plants.

Long Y, Scheres B, Blilou I.

J Exp Bot. 2015 Feb;66(4):1133-44. doi: 10.1093/jxb/eru548. Epub 2015 Jan 29. Review.

PMID:
25635110
21.

A plant U-box protein, PUB4, regulates asymmetric cell division and cell proliferation in the root meristem.

Kinoshita A, ten Hove CA, Tabata R, Yamada M, Shimizu N, Ishida T, Yamaguchi K, Shigenobu S, Takebayashi Y, Iuchi S, Kobayashi M, Kurata T, Wada T, Seo M, Hasebe M, Blilou I, Fukuda H, Scheres B, Heidstra R, Kamiya Y, Sawa S.

Development. 2015 Feb 1;142(3):444-53. doi: 10.1242/dev.113167.

22.

A SCARECROW-RETINOBLASTOMA protein network controls protective quiescence in the Arabidopsis root stem cell organizer.

Cruz-Ramírez A, Díaz-Triviño S, Wachsman G, Du Y, Arteága-Vázquez M, Zhang H, Benjamins R, Blilou I, Neef AB, Chandler V, Scheres B.

PLoS Biol. 2013 Nov;11(11):e1001724. doi: 10.1371/journal.pbio.1001724. Epub 2013 Nov 26.

23.

Unraveling root developmental programs initiated by beneficial Pseudomonas spp. bacteria.

Zamioudis C, Mastranesti P, Dhonukshe P, Blilou I, Pieterse CM.

Plant Physiol. 2013 May;162(1):304-18. doi: 10.1104/pp.112.212597. Epub 2013 Mar 29.

24.

A bistable circuit involving SCARECROW-RETINOBLASTOMA integrates cues to inform asymmetric stem cell division.

Cruz-Ramírez A, Díaz-Triviño S, Blilou I, Grieneisen VA, Sozzani R, Zamioudis C, Miskolczi P, Nieuwland J, Benjamins R, Dhonukshe P, Caballero-Pérez J, Horvath B, Long Y, Mähönen AP, Zhang H, Xu J, Murray JA, Benfey PN, Bako L, Marée AF, Scheres B.

Cell. 2012 Aug 31;150(5):1002-15. doi: 10.1016/j.cell.2012.07.017. Epub 2012 Aug 23.

25.

COP1 mediates the coordination of root and shoot growth by light through modulation of PIN1- and PIN2-dependent auxin transport in Arabidopsis.

Sassi M, Lu Y, Zhang Y, Wang J, Dhonukshe P, Blilou I, Dai M, Li J, Gong X, Jaillais Y, Yu X, Traas J, Ruberti I, Wang H, Scheres B, Vernoux T, Xu J.

Development. 2012 Sep;139(18):3402-12. doi: 10.1242/dev.078212.

26.

Arabidopsis PLETHORA transcription factors control phyllotaxis.

Prasad K, Grigg SP, Barkoulas M, Yadav RK, Sanchez-Perez GF, Pinon V, Blilou I, Hofhuis H, Dhonukshe P, Galinha C, Mähönen AP, Muller WH, Raman S, Verkleij AJ, Snel B, Reddy GV, Tsiantis M, Scheres B.

Curr Biol. 2011 Jul 12;21(13):1123-8. doi: 10.1016/j.cub.2011.05.009. Epub 2011 Jun 23.

27.

JACKDAW controls epidermal patterning in the Arabidopsis root meristem through a non-cell-autonomous mechanism.

Hassan H, Scheres B, Blilou I.

Development. 2010 May;137(9):1523-9. doi: 10.1242/dev.048777. Epub 2010 Mar 31.

28.

Generation of cell polarity in plants links endocytosis, auxin distribution and cell fate decisions.

Dhonukshe P, Tanaka H, Goh T, Ebine K, Mähönen AP, Prasad K, Blilou I, Geldner N, Xu J, Uemura T, Chory J, Ueda T, Nakano A, Scheres B, Friml J.

Nature. 2008 Dec 18;456(7224):962-6. doi: 10.1038/nature07409. Epub 2008 Oct 26. Retraction in: Nature. 2014 Jul 17;511(7509):370.

29.

PLETHORA proteins as dose-dependent master regulators of Arabidopsis root development.

Galinha C, Hofhuis H, Luijten M, Willemsen V, Blilou I, Heidstra R, Scheres B.

Nature. 2007 Oct 25;449(7165):1053-7.

PMID:
17960244
30.
31.

In situ hybridization technique for mRNA detection in whole mount Arabidopsis samples.

Hejátko J, Blilou I, Brewer PB, Friml J, Scheres B, Benková E.

Nat Protoc. 2006;1(4):1939-46.

PMID:
17487180
32.

An evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants.

Cui H, Levesque MP, Vernoux T, Jung JW, Paquette AJ, Gallagher KL, Wang JY, Blilou I, Scheres B, Benfey PN.

Science. 2007 Apr 20;316(5823):421-5. Erratum in: Science. 2007 Dec 21;318(5858);1866.

33.

Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis.

Levesque MP, Vernoux T, Busch W, Cui H, Wang JY, Blilou I, Hassan H, Nakajima K, Matsumoto N, Lohmann JU, Scheres B, Benfey PN.

PLoS Biol. 2006 May;4(5):e143. Epub 2006 May 2. Erratum in: PLoS Biol. 2006 Jul;4(7):e249.

34.

Polar PIN localization directs auxin flow in plants.

Wisniewska J, Xu J, Seifertová D, Brewer PB, Ruzicka K, Blilou I, Rouquié D, Benková E, Scheres B, Friml J.

Science. 2006 May 12;312(5775):883. Epub 2006 Apr 6.

35.

The RETINOBLASTOMA-RELATED gene regulates stem cell maintenance in Arabidopsis roots.

Wildwater M, Campilho A, Perez-Perez JM, Heidstra R, Blilou I, Korthout H, Chatterjee J, Mariconti L, Gruissem W, Scheres B.

Cell. 2005 Dec 29;123(7):1337-49.

36.

The PIN auxin efflux facilitators: evolutionary and functional perspectives.

Paponov IA, Teale WD, Trebar M, Blilou I, Palme K.

Trends Plant Sci. 2005 Apr;10(4):170-7. Review.

PMID:
15817418
37.

The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots.

Blilou I, Xu J, Wildwater M, Willemsen V, Paponov I, Friml J, Heidstra R, Aida M, Palme K, Scheres B.

Nature. 2005 Jan 6;433(7021):39-44.

PMID:
15635403
38.

The PLETHORA genes mediate patterning of the Arabidopsis root stem cell niche.

Aida M, Beis D, Heidstra R, Willemsen V, Blilou I, Galinha C, Nussaume L, Noh YS, Amasino R, Scheres B.

Cell. 2004 Oct 1;119(1):109-20.

39.

The Arabidopsis HOBBIT gene encodes a CDC27 homolog that links the plant cell cycle to progression of cell differentiation.

Blilou I, Frugier F, Folmer S, Serralbo O, Willemsen V, Wolkenfelt H, Eloy NB, Ferreira PC, Weisbeek P, Scheres B.

Genes Dev. 2002 Oct 1;16(19):2566-75.

40.

AtPIN4 mediates sink-driven auxin gradients and root patterning in Arabidopsis.

Friml J, Benková E, Blilou I, Wisniewska J, Hamann T, Ljung K, Woody S, Sandberg G, Scheres B, Jürgens G, Palme K.

Cell. 2002 Mar 8;108(5):661-73.

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