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Items: 10

1.

Identification of Hanks-Type Kinase PknB-Specific Targets in the Streptococcus thermophilus Phosphoproteome.

Henry C, Haller L, Blein-Nicolas M, Zivy M, Canette A, Verbrugghe M, Mézange C, Boulay M, Gardan R, Samson S, Martin V, André-Leroux G, Monnet V.

Front Microbiol. 2019 Jun 19;10:1329. doi: 10.3389/fmicb.2019.01329. eCollection 2019.

2.

Modeling Protein Destiny in Developing Fruit.

Belouah I, Nazaret C, Pétriacq P, Prigent S, Bénard C, Mengin V, Blein-Nicolas M, Denton AK, Balliau T, Augé S, Bouchez O, Mazat JP, Stitt M, Usadel B, Zivy M, Beauvoit B, Gibon Y, Colombié S.

Plant Physiol. 2019 Jul;180(3):1709-1724. doi: 10.1104/pp.19.00086. Epub 2019 Apr 23.

3.

Peptide filtering differently affects the performances of XIC-based quantification methods.

Belouah I, Blein-Nicolas M, Balliau T, Gibon Y, Zivy M, Colombié S.

J Proteomics. 2019 Feb 20;193:131-141. doi: 10.1016/j.jprot.2018.10.003. Epub 2018 Oct 10.

4.

Evaluation of Optimized Tube-Gel Methods of Sample Preparation for Large-Scale Plant Proteomics.

Balliau T, Blein-Nicolas M, Zivy M.

Proteomes. 2018 Jan 30;6(1). pii: E6. doi: 10.3390/proteomes6010006.

5.

Quantitative Proteomics Analysis Confirmed Oxidative Metabolism Predominates in Streptomyces coelicolor versus Glycolytic Metabolism in Streptomyces lividans.

Millan-Oropeza A, Henry C, Blein-Nicolas M, Aubert-Frambourg A, Moussa F, Bleton J, Virolle MJ.

J Proteome Res. 2017 Jul 7;16(7):2597-2613. doi: 10.1021/acs.jproteome.7b00163. Epub 2017 Jun 15.

PMID:
28560880
6.

X!TandemPipeline: A Tool to Manage Sequence Redundancy for Protein Inference and Phosphosite Identification.

Langella O, Valot B, Balliau T, Blein-Nicolas M, Bonhomme L, Zivy M.

J Proteome Res. 2017 Feb 3;16(2):494-503. doi: 10.1021/acs.jproteome.6b00632. Epub 2016 Dec 19.

PMID:
27990826
7.

Thousand and one ways to quantify and compare protein abundances in label-free bottom-up proteomics.

Blein-Nicolas M, Zivy M.

Biochim Biophys Acta. 2016 Aug;1864(8):883-95. doi: 10.1016/j.bbapap.2016.02.019. Epub 2016 Mar 3. Review.

PMID:
26947242
8.

A Systems Approach to Elucidate Heterosis of Protein Abundances in Yeast.

Blein-Nicolas M, Albertin W, da Silva T, Valot B, Balliau T, Masneuf-Pomarède I, Bely M, Marullo P, Sicard D, Dillmann C, de Vienne D, Zivy M.

Mol Cell Proteomics. 2015 Aug;14(8):2056-71. doi: 10.1074/mcp.M115.048058. Epub 2015 May 13.

9.

Yeast proteome variations reveal different adaptive responses to grape must fermentation.

Blein-Nicolas M, Albertin W, Valot B, Marullo P, Sicard D, Giraud C, Huet S, Bourgais A, Dillmann C, de Vienne D, Zivy M.

Mol Biol Evol. 2013 Jun;30(6):1368-83. doi: 10.1093/molbev/mst050. Epub 2013 Mar 14.

PMID:
23493259
10.

Including shared peptides for estimating protein abundances: a significant improvement for quantitative proteomics.

Blein-Nicolas M, Xu H, de Vienne D, Giraud C, Huet S, Zivy M.

Proteomics. 2012 Sep;12(18):2797-801. doi: 10.1002/pmic.201100660.

PMID:
22833229

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