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Items: 11

1.

Whole genome sequence analysis reveals high genetic variation of newly isolated Acidithiobacillus ferrooxidans IO-2C.

Fariq A, Blazier JC, Yasmin A, Gentry TJ, Deng Y.

Sci Rep. 2019 Sep 10;9(1):13049. doi: 10.1038/s41598-019-49213-x.

2.

Natural selection interacts with recombination to shape the evolution of hybrid genomes.

Schumer M, Xu C, Powell DL, Durvasula A, Skov L, Holland C, Blazier JC, Sankararaman S, Andolfatto P, Rosenthal GG, Przeworski M.

Science. 2018 May 11;360(6389):656-660. doi: 10.1126/science.aar3684. Epub 2018 Apr 19.

3.

Recombination-dependent replication and gene conversion homogenize repeat sequences and diversify plastid genome structure.

Ruhlman TA, Zhang J, Blazier JC, Sabir JSM, Jansen RK.

Am J Bot. 2017 Apr;104(4):559-572. doi: 10.3732/ajb.1600453. Epub 2017 Apr 11.

4.

Variable presence of the inverted repeat and plastome stability in Erodium.

Blazier JC, Jansen RK, Mower JP, Govindu M, Zhang J, Weng ML, Ruhlman TA.

Ann Bot. 2016 Jun;117(7):1209-20. doi: 10.1093/aob/mcw065. Epub 2016 Apr 28.

5.

Divergence of RNA polymerase α subunits in angiosperm plastid genomes is mediated by genomic rearrangement.

Blazier JC, Ruhlman TA, Weng ML, Rehman SK, Sabir JS, Jansen RK.

Sci Rep. 2016 Apr 18;6:24595. doi: 10.1038/srep24595.

6.

Coevolution between Nuclear-Encoded DNA Replication, Recombination, and Repair Genes and Plastid Genome Complexity.

Zhang J, Ruhlman TA, Sabir JS, Blazier JC, Weng ML, Park S, Jansen RK.

Genome Biol Evol. 2016 Feb 17;8(3):622-34. doi: 10.1093/gbe/evw033.

7.

NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss.

Ruhlman TA, Chang WJ, Chen JJ, Huang YT, Chan MT, Zhang J, Liao DC, Blazier JC, Jin X, Shih MC, Jansen RK, Lin CS.

BMC Plant Biol. 2015 Apr 11;15:100. doi: 10.1186/s12870-015-0484-7.

8.

Coordinated rates of evolution between interacting plastid and nuclear genes in Geraniaceae.

Zhang J, Ruhlman TA, Sabir J, Blazier JC, Jansen RK.

Plant Cell. 2015 Mar;27(3):563-73. doi: 10.1105/tpc.114.134353. Epub 2015 Feb 27.

9.

Reconstruction of the ancestral plastid genome in Geraniaceae reveals a correlation between genome rearrangements, repeats, and nucleotide substitution rates.

Weng ML, Blazier JC, Govindu M, Jansen RK.

Mol Biol Evol. 2014 Mar;31(3):645-59. doi: 10.1093/molbev/mst257. Epub 2013 Dec 12.

PMID:
24336877
10.

The growth response of Alternanthera philoxeroides in a simulated post-combustion emission with ultrahigh [CO2] and acidic pollutants.

Xu CY, Griffin KL, Blazier JC, Craig EC, Gilbert DS, Sritrairat S, Anderson OR, Castaldi MJ, Beaumont L.

Environ Pollut. 2009 Jul;157(7):2118-25. doi: 10.1016/j.envpol.2009.02.013. Epub 2009 Mar 6.

PMID:
19269074
11.

Extensive reorganization of the plastid genome of Trifolium subterraneum (Fabaceae) is associated with numerous repeated sequences and novel DNA insertions.

Cai Z, Guisinger M, Kim HG, Ruck E, Blazier JC, McMurtry V, Kuehl JV, Boore J, Jansen RK.

J Mol Evol. 2008 Dec;67(6):696-704. doi: 10.1007/s00239-008-9180-7.

PMID:
19018585

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