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Items: 19

1.

Analytical and clinical validation of a microbial cell-free DNA sequencing test for infectious disease.

Blauwkamp TA, Thair S, Rosen MJ, Blair L, Lindner MS, Vilfan ID, Kawli T, Christians FC, Venkatasubrahmanyam S, Wall GD, Cheung A, Rogers ZN, Meshulam-Simon G, Huijse L, Balakrishnan S, Quinn JV, Hollemon D, Hong DK, Vaughn ML, Kertesz M, Bercovici S, Wilber JC, Yang S.

Nat Microbiol. 2019 Feb 11. doi: 10.1038/s41564-018-0349-6. [Epub ahead of print]

PMID:
30742071
2.

Liquid biopsy for infectious diseases: sequencing of cell-free plasma to detect pathogen DNA in patients with invasive fungal disease.

Hong DK, Blauwkamp TA, Kertesz M, Bercovici S, Truong C, Banaei N.

Diagn Microbiol Infect Dis. 2018 Nov;92(3):210-213. doi: 10.1016/j.diagmicrobio.2018.06.009. Epub 2018 Jun 22.

3.

Diagnosis of Capnocytophaga canimorsus Sepsis by Whole-Genome Next-Generation Sequencing.

Abril MK, Barnett AS, Wegermann K, Fountain E, Strand A, Heyman BM, Blough BA, Swaminathan AC, Sharma-Kuinkel B, Ruffin F, Alexander BD, McCall CM, Costa SF, Arcasoy MO, Hong DK, Blauwkamp TA, Kertesz M, Fowler VG Jr, Kraft BD.

Open Forum Infect Dis. 2016 Jul 12;3(3):ofw144. eCollection 2016 Sep.

4.

Accurate, multi-kb reads resolve complex populations and detect rare microorganisms.

Sharon I, Kertesz M, Hug LA, Pushkarev D, Blauwkamp TA, Castelle CJ, Amirebrahimi M, Thomas BC, Burstein D, Tringe SG, Williams KH, Banfield JF.

Genome Res. 2015 Apr;25(4):534-43. doi: 10.1101/gr.183012.114. Epub 2015 Feb 9.

5.

Illumina TruSeq synthetic long-reads empower de novo assembly and resolve complex, highly-repetitive transposable elements.

McCoy RC, Taylor RW, Blauwkamp TA, Kelley JL, Kertesz M, Pushkarev D, Petrov DA, Fiston-Lavier AS.

PLoS One. 2014 Sep 4;9(9):e106689. doi: 10.1371/journal.pone.0106689. eCollection 2014.

6.

Wnt-mediated repression via bipartite DNA recognition by TCF in the Drosophila hematopoietic system.

Zhang CU, Blauwkamp TA, Burby PE, Cadigan KM.

PLoS Genet. 2014 Aug 21;10(8):e1004509. doi: 10.1371/journal.pgen.1004509. eCollection 2014 Aug.

7.

Reconstituting pancreas development from purified progenitor cells reveals genes essential for islet differentiation.

Sugiyama T, Benitez CM, Ghodasara A, Liu L, McLean GW, Lee J, Blauwkamp TA, Nusse R, Wright CV, Gu G, Kim SK.

Proc Natl Acad Sci U S A. 2013 Jul 30;110(31):12691-6. doi: 10.1073/pnas.1304507110. Epub 2013 Jul 12.

8.

Prospective isolation of human embryonic stem cell-derived cardiovascular progenitors that integrate into human fetal heart tissue.

Ardehali R, Ali SR, Inlay MA, Abilez OJ, Chen MQ, Blauwkamp TA, Yazawa M, Gong Y, Nusse R, Drukker M, Weissman IL.

Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):3405-10. doi: 10.1073/pnas.1220832110. Epub 2013 Feb 7.

9.

Endogenous Wnt signalling in human embryonic stem cells generates an equilibrium of distinct lineage-specified progenitors.

Blauwkamp TA, Nigam S, Ardehali R, Weissman IL, Nusse R.

Nat Commun. 2012;3:1070. doi: 10.1038/ncomms2064.

10.

xol-1, the master sex-switch gene in C. elegans, is a transcriptional target of the terminal sex-determining factor TRA-1.

Hargitai B, Kutnyánszky V, Blauwkamp TA, Steták A, Csankovszki G, Takács-Vellai K, Vellai T.

Development. 2009 Dec;136(23):3881-7. doi: 10.1242/dev.034637.

11.

Two classes of dosage compensation complex binding elements along Caenorhabditis elegans X chromosomes.

Blauwkamp TA, Csankovszki G.

Mol Cell Biol. 2009 Apr;29(8):2023-31. doi: 10.1128/MCB.01448-08. Epub 2009 Feb 2.

12.

The chromatin remodelers ISWI and ACF1 directly repress Wingless transcriptional targets.

Liu YI, Chang MV, Li HE, Barolo S, Chang JL, Blauwkamp TA, Cadigan KM.

Dev Biol. 2008 Nov 1;323(1):41-52. doi: 10.1016/j.ydbio.2008.08.011. Epub 2008 Aug 22.

13.

Novel TCF-binding sites specify transcriptional repression by Wnt signalling.

Blauwkamp TA, Chang MV, Cadigan KM.

EMBO J. 2008 May 21;27(10):1436-46. doi: 10.1038/emboj.2008.80. Epub 2008 Apr 17.

14.

Spenito and Split ends act redundantly to promote Wingless signaling.

Chang JL, Lin HV, Blauwkamp TA, Cadigan KM.

Dev Biol. 2008 Feb 1;314(1):100-11. doi: 10.1016/j.ydbio.2007.11.023. Epub 2007 Nov 28.

15.

Antagonism of PII signalling by the AmtB protein of Escherichia coli.

Blauwkamp TA, Ninfa AJ.

Mol Microbiol. 2003 May;48(4):1017-28.

16.
17.

Context-dependent functions of the PII and GlnK signal transduction proteins in Escherichia coli.

Atkinson MR, Blauwkamp TA, Ninfa AJ.

J Bacteriol. 2002 Oct;184(19):5364-75.

18.
19.

Nac-mediated repression of the serA promoter of Escherichia coli.

Blauwkamp TA, Ninfa AJ.

Mol Microbiol. 2002 Jul;45(2):351-63.

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