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Items: 38

1.

Contribution of rare inherited and de novo variants in 2,871 congenital heart disease probands.

Jin SC, Homsy J, Zaidi S, Lu Q, Morton S, DePalma SR, Zeng X, Qi H, Chang W, Sierant MC, Hung WC, Haider S, Zhang J, Knight J, Bjornson RD, Castaldi C, Tikhonoa IR, Bilguvar K, Mane SM, Sanders SJ, Mital S, Russell MW, Gaynor JW, Deanfield J, Giardini A, Porter GA Jr, Srivastava D, Lo CW, Shen Y, Watkins WS, Yandell M, Yost HJ, Tristani-Firouzi M, Newburger JW, Roberts AE, Kim R, Zhao H, Kaltman JR, Goldmuntz E, Chung WK, Seidman JG, Gelb BD, Seidman CE, Lifton RP, Brueckner M.

Nat Genet. 2017 Nov;49(11):1593-1601. doi: 10.1038/ng.3970. Epub 2017 Oct 9.

2.

Korean Variant Archive (KOVA): a reference database of genetic variations in the Korean population.

Lee S, Seo J, Park J, Nam JY, Choi A, Ignatius JS, Bjornson RD, Chae JH, Jang IJ, Lee S, Park WY, Baek D, Choi M.

Sci Rep. 2017 Jun 27;7(1):4287. doi: 10.1038/s41598-017-04642-4.

3.

Large-Scale trans-eQTLs Affect Hundreds of Transcripts and Mediate Patterns of Transcriptional Co-regulation.

Brynedal B, Choi J, Raj T, Bjornson R, Stranger BE, Neale BM, Voight BF, Cotsapas C.

Am J Hum Genet. 2017 Apr 6;100(4):581-591. doi: 10.1016/j.ajhg.2017.02.004. Epub 2017 Mar 9.

4.

Genomic landscape of cutaneous T cell lymphoma.

Choi J, Goh G, Walradt T, Hong BS, Bunick CG, Chen K, Bjornson RD, Maman Y, Wang T, Tordoff J, Carlson K, Overton JD, Liu KJ, Lewis JM, Devine L, Barbarotta L, Foss FM, Subtil A, Vonderheid EC, Edelson RL, Schatz DG, Boggon TJ, Girardi M, Lifton RP.

Nat Genet. 2015 Sep;47(9):1011-9. doi: 10.1038/ng.3356. Epub 2015 Jul 20.

5.

YPED: an integrated bioinformatics suite and database for mass spectrometry-based proteomics research.

Colangelo CM, Shifman M, Cheung KH, Stone KL, Carriero NJ, Gulcicek EE, Lam TT, Wu T, Bjornson RD, Bruce C, Nairn AC, Rinehart J, Miller PL, Williams KR.

Genomics Proteomics Bioinformatics. 2015 Feb;13(1):25-35. doi: 10.1016/j.gpb.2014.11.002. Epub 2015 Feb 21.

6.

Development of a novel method to create double-strand break repair fingerprints using next-generation sequencing.

Soong CP, Breuer GA, Hannon RA, Kim SD, Salem AF, Wang G, Yu R, Carriero NJ, Bjornson R, Sundaram RK, Bindra RS.

DNA Repair (Amst). 2015 Feb;26:44-53. doi: 10.1016/j.dnarep.2014.12.002. Epub 2014 Dec 19.

PMID:
25547252
7.

Comparative genomics reveals multiple genetic backgrounds of human pathogenicity in the Trypanosoma brucei complex.

Sistrom M, Evans B, Bjornson R, Gibson W, Balmer O, Mäser P, Aksoy S, Caccone A.

Genome Biol Evol. 2014 Oct 5;6(10):2811-9. doi: 10.1093/gbe/evu222.

8.

A spatial simulation approach to account for protein structure when identifying non-random somatic mutations.

Ryslik GA, Cheng Y, Cheung KH, Bjornson RD, Zelterman D, Modis Y, Zhao H.

BMC Bioinformatics. 2014 Jul 3;15:231. doi: 10.1186/1471-2105-15-231.

9.

Identification of PLX4032-resistance mechanisms and implications for novel RAF inhibitors.

Choi J, Landrette SF, Wang T, Evans P, Bacchiocchi A, Bjornson R, Cheng E, Stiegler AL, Gathiaka S, Acevedo O, Boggon TJ, Krauthammer M, Halaban R, Xu T.

Pigment Cell Melanoma Res. 2014 Mar;27(2):253-62. doi: 10.1111/pcmr.12197. Epub 2014 Jan 6.

10.

Low-copy piggyBac transposon mutagenesis in mice identifies genes driving melanoma.

Ni TK, Landrette SF, Bjornson RD, Bosenberg MW, Xu T.

Proc Natl Acad Sci U S A. 2013 Sep 17;110(38):E3640-9. doi: 10.1073/pnas.1314435110. Epub 2013 Sep 3.

11.

De novo mutations in histone-modifying genes in congenital heart disease.

Zaidi S, Choi M, Wakimoto H, Ma L, Jiang J, Overton JD, Romano-Adesman A, Bjornson RD, Breitbart RE, Brown KK, Carriero NJ, Cheung YH, Deanfield J, DePalma S, Fakhro KA, Glessner J, Hakonarson H, Italia MJ, Kaltman JR, Kaski J, Kim R, Kline JK, Lee T, Leipzig J, Lopez A, Mane SM, Mitchell LE, Newburger JW, Parfenov M, Pe'er I, Porter G, Roberts AE, Sachidanandam R, Sanders SJ, Seiden HS, State MW, Subramanian S, Tikhonova IR, Wang W, Warburton D, White PS, Williams IA, Zhao H, Seidman JG, Brueckner M, Chung WK, Gelb BD, Goldmuntz E, Seidman CE, Lifton RP.

Nature. 2013 Jun 13;498(7453):220-3. doi: 10.1038/nature12141. Epub 2013 May 12.

12.

De novo mutations revealed by whole-exome sequencing are strongly associated with autism.

Sanders SJ, Murtha MT, Gupta AR, Murdoch JD, Raubeson MJ, Willsey AJ, Ercan-Sencicek AG, DiLullo NM, Parikshak NN, Stein JL, Walker MF, Ober GT, Teran NA, Song Y, El-Fishawy P, Murtha RC, Choi M, Overton JD, Bjornson RD, Carriero NJ, Meyer KA, Bilguvar K, Mane SM, Sestan N, Lifton RP, Günel M, Roeder K, Geschwind DH, Devlin B, State MW.

Nature. 2012 Apr 4;485(7397):237-41. doi: 10.1038/nature10945.

13.

Insight into the transmission biology and species-specific functional capabilities of tsetse (Diptera: glossinidae) obligate symbiont Wigglesworthia.

Rio RV, Symula RE, Wang J, Lohs C, Wu YN, Snyder AK, Bjornson RD, Oshima K, Biehl BS, Perna NT, Hattori M, Aksoy S.

MBio. 2012 Feb 14;3(1). pii: e00240-11. doi: 10.1128/mBio.00240-11. Print 2012.

14.

Mutations in kelch-like 3 and cullin 3 cause hypertension and electrolyte abnormalities.

Boyden LM, Choi M, Choate KA, Nelson-Williams CJ, Farhi A, Toka HR, Tikhonova IR, Bjornson R, Mane SM, Colussi G, Lebel M, Gordon RD, Semmekrot BA, Poujol A, Välimäki MJ, De Ferrari ME, Sanjad SA, Gutkin M, Karet FE, Tucci JR, Stockigt JR, Keppler-Noreuil KM, Porter CC, Anand SK, Whiteford ML, Davis ID, Dewar SB, Bettinelli A, Fadrowski JJ, Belsha CW, Hunley TE, Nelson RD, Trachtman H, Cole TR, Pinsk M, Bockenhauer D, Shenoy M, Vaidyanathan P, Foreman JW, Rasoulpour M, Thameem F, Al-Shahrouri HZ, Radhakrishnan J, Gharavi AG, Goilav B, Lifton RP.

Nature. 2012 Jan 22;482(7383):98-102. doi: 10.1038/nature10814.

15.

Influence of host phylogeographic patterns and incomplete lineage sorting on within-species genetic variability in Wigglesworthia species, obligate symbionts of tsetse flies.

Symula RE, Marpuri I, Bjornson RD, Okedi L, Beadell J, Alam U, Aksoy S, Caccone A.

Appl Environ Microbiol. 2011 Dec;77(23):8400-8. doi: 10.1128/AEM.05688-11. Epub 2011 Sep 23.

16.

Power of data mining methods to detect genetic associations and interactions.

Molinaro AM, Carriero N, Bjornson R, Hartge P, Rothman N, Chatterjee N.

Hum Hered. 2011;72(2):85-97. doi: 10.1159/000330579. Epub 2011 Sep 17.

17.

AlleleSeq: analysis of allele-specific expression and binding in a network framework.

Rozowsky J, Abyzov A, Wang J, Alves P, Raha D, Harmanci A, Leng J, Bjornson R, Kong Y, Kitabayashi N, Bhardwaj N, Rubin M, Snyder M, Gerstein M.

Mol Syst Biol. 2011 Aug 2;7:522. doi: 10.1038/msb.2011.54.

18.

ACT: aggregation and correlation toolbox for analyses of genome tracks.

Jee J, Rozowsky J, Yip KY, Lochovsky L, Bjornson R, Zhong G, Zhang Z, Fu Y, Wang J, Weng Z, Gerstein M.

Bioinformatics. 2011 Apr 15;27(8):1152-4. doi: 10.1093/bioinformatics/btr092. Epub 2011 Feb 23.

19.

Analysis of membrane proteins in metagenomics: networks of correlated environmental features and protein families.

Patel PV, Gianoulis TA, Bjornson RD, Yip KY, Engelman DM, Gerstein MB.

Genome Res. 2010 Jul;20(7):960-71. doi: 10.1101/gr.102814.109. Epub 2010 Apr 29.

20.

RigidFinder: a fast and sensitive method to detect rigid blocks in large macromolecular complexes.

Abyzov A, Bjornson R, Felipe M, Gerstein M.

Proteins. 2010 Feb 1;78(2):309-24. doi: 10.1002/prot.22544.

PMID:
19705487
21.

Integrating sequencing technologies in personal genomics: optimal low cost reconstruction of structural variants.

Du J, Bjornson RD, Zhang ZD, Kong Y, Snyder M, Gerstein MB.

PLoS Comput Biol. 2009 Jul;5(7):e1000432. doi: 10.1371/journal.pcbi.1000432. Epub 2009 Jul 10.

22.

Quantifying environmental adaptation of metabolic pathways in metagenomics.

Gianoulis TA, Raes J, Patel PV, Bjornson R, Korbel JO, Letunic I, Yamada T, Paccanaro A, Jensen LJ, Snyder M, Bork P, Gerstein MB.

Proc Natl Acad Sci U S A. 2009 Feb 3;106(5):1374-9. doi: 10.1073/pnas.0808022106. Epub 2009 Jan 22.

23.

PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls.

Rozowsky J, Euskirchen G, Auerbach RK, Zhang ZD, Gibson T, Bjornson R, Carriero N, Snyder M, Gerstein MB.

Nat Biotechnol. 2009 Jan;27(1):66-75. doi: 10.1038/nbt.1518. Epub 2009 Jan 4.

24.

Keck Foundation Biotechnology Resource Laboratory, Yale University.

Stone KL, Bjornson RD, Blasko GG, Bruce C, Cofrancesco R, Carriero NJ, Colangelo CM, Crawford JK, Crawford JM, daSilva NC, Deluca JD, Elliott JI, Elliott MM, Flory PJ, Folta-Stogniew EJ, Gulcicek E, Kong Y, Lam TT, Lee JY, Lin A, LoPresti MB, Mane SM, McMurray WJ, Tikhonova IR, Westman S, Williams NA, Wu TL, Hongyu Z, Williams KR.

Yale J Biol Med. 2007 Dec;80(4):195-211. Review. No abstract available.

25.

X!!Tandem, an improved method for running X!tandem in parallel on collections of commodity computers.

Bjornson RD, Carriero NJ, Colangelo C, Shifman M, Cheung KH, Miller PL, Williams K.

J Proteome Res. 2008 Jan;7(1):293-9. Epub 2007 Sep 29.

26.
27.

Characterization of the nucleotide sequence of the Lymantria dispar nuclear polyhedrosis virus DNA polymerase gene region.

Bjornson RM, Glocker B, Rohrmann GF.

J Gen Virol. 1992 Dec;73 ( Pt 12):3177-83.

PMID:
1469355
28.

Ectopic expression of ultraviolet-rhodopsins in the blue photoreceptor cells of Drosophila: visual physiology and photochemistry of transgenic animals.

Feiler R, Bjornson R, Kirschfeld K, Mismer D, Rubin GM, Smith DP, Socolich M, Zuker CS.

J Neurosci. 1992 Oct;12(10):3862-8.

29.

The Autographa californica baculovirus genome: evidence for multiple replication origins.

Pearson M, Bjornson R, Pearson G, Rohrmann G.

Science. 1992 Sep 4;257(5075):1382-4.

PMID:
1529337
30.

Nucleotide sequence of the p39-capsid gene region of the Lymantria dispar nuclear polyhedrosis virus.

Bjornson RM, Rohrmann GF.

J Gen Virol. 1992 Jun;73 ( Pt 6):1505-8.

PMID:
1607869
31.

Nucleotide sequence of the polyhedron envelope protein gene region of the Lymantria dispar nuclear polyhedrosis virus.

Bjornson RM, Rohrmann GF.

J Gen Virol. 1992 Jun;73 ( Pt 6):1499-504. Erratum in: J Gen Virol 1994 Dec;75(Pt 12):3687.

PMID:
1607868
32.

Myelographic characteristics of metastasis to the spinal cord and cauda equina.

Prentice WB, Kieffer SA, Gold LH, Bjornson RG.

Am J Roentgenol Radium Ther Nucl Med. 1973 Jul;118(3):682-9. No abstract available.

PMID:
4579216
33.

The people problem.

Bjornson R.

Minn Med. 1973 May;56(5):424. No abstract available.

PMID:
4698412
34.

Perspectives on the drug problem.

Bjornson RG.

Minn Med. 1973 Mar;56(3):201-4. No abstract available.

PMID:
4734615
35.

Shortening the medical school curriculum.

Bjornson RG.

JAMA. 1971 Dec 20;218(12):1830. No abstract available.

PMID:
5171452
36.

Modification of an operating-room table for immediate radiographic evaluation of the urinary tract in the acute, severe trauma patient.

Cass AS, Ireland GW, Bressler E, Bjornson R, Demeules J, Perry J Jr.

J Urol. 1971 Apr;105(4):569-70. No abstract available.

PMID:
5556708
37.

Mediastinal lipoma.

ALDEN JF, BJORNSON RB, STERNER ER, SPRAFKA JL.

Dis Chest. 1957 Nov;32(5):580-1. No abstract available.

PMID:
13473673
38.

Developmental anomaly of the lateral malleolus simulating fracture.

BJORNSON RG.

J Bone Joint Surg Am. 1956 Jan;38-A(1):128-30. No abstract available.

PMID:
13286272

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