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Items: 19

1.

Revealing evolutionary constraints on proteins through sequence analysis.

Wang SW, Bitbol AF, Wingreen NS.

PLoS Comput Biol. 2019 Apr 24;15(4):e1007010. doi: 10.1371/journal.pcbi.1007010. eCollection 2019 Apr.

2.

Antibody-mediated crosslinking of gut bacteria hinders the spread of antibiotic resistance.

Bansept F, Marrec L, Bitbol AF, Loverdo C.

Evolution. 2019 Jun;73(6):1077-1088. doi: 10.1111/evo.13730. Epub 2019 Apr 22.

PMID:
30957218
3.

Inferring interaction partners from protein sequences using mutual information.

Bitbol AF.

PLoS Comput Biol. 2018 Nov 13;14(11):e1006401. doi: 10.1371/journal.pcbi.1006401. eCollection 2018 Nov.

4.

Quantifying the impact of a periodic presence of antimicrobial on resistance evolution in a homogeneous microbial population of fixed size.

Marrec L, Bitbol AF.

J Theor Biol. 2018 Nov 14;457:190-198. doi: 10.1016/j.jtbi.2018.08.040. Epub 2018 Aug 31.

PMID:
30172688
5.

pH sensing by lipids in membranes: The fundamentals of pH-driven migration, polarization and deformations of lipid bilayer assemblies.

Angelova MI, Bitbol AF, Seigneuret M, Staneva G, Kodama A, Sakuma Y, Kawakatsu T, Imai M, Puff N.

Biochim Biophys Acta Biomembr. 2018 Oct;1860(10):2042-2063. doi: 10.1016/j.bbamem.2018.02.026. Epub 2018 Mar 6. Review.

PMID:
29501601
6.

Bacterial biofilm under flow: First a physical struggle to stay, then a matter of breathing.

Thomen P, Robert J, Monmeyran A, Bitbol AF, Douarche C, Henry N.

PLoS One. 2017 Apr 12;12(4):e0175197. doi: 10.1371/journal.pone.0175197. eCollection 2017.

7.

Inferring interaction partners from protein sequences.

Bitbol AF, Dwyer RS, Colwell LJ, Wingreen NS.

Proc Natl Acad Sci U S A. 2016 Oct 25;113(43):12180-12185. Epub 2016 Sep 23.

8.

Fundamental constraints on the abundances of chemotaxis proteins.

Bitbol AF, Wingreen NS.

Biophys J. 2015 Mar 10;108(5):1293-305. doi: 10.1016/j.bpj.2015.01.024.

9.

Interplay of packing and flip-flop in local bilayer deformation. How phosphatidylglycerol could rescue mitochondrial function in a cardiolipin-deficient yeast mutant.

Khalifat N, Rahimi M, Bitbol AF, Seigneuret M, Fournier JB, Puff N, Arroyo M, Angelova MI.

Biophys J. 2014 Aug 19;107(4):879-90. doi: 10.1016/j.bpj.2014.07.015.

10.

Quantifying the role of population subdivision in evolution on rugged fitness landscapes.

Bitbol AF, Schwab DJ.

PLoS Comput Biol. 2014 Aug 14;10(8):e1003778. doi: 10.1371/journal.pcbi.1003778. eCollection 2014 Aug.

11.

Large-scale filament formation inhibits the activity of CTP synthetase.

Barry RM, Bitbol AF, Lorestani A, Charles EJ, Habrian CH, Hansen JM, Li HJ, Baldwin EP, Wingreen NS, Kollman JM, Gitai Z.

Elife. 2014 Jul 16;3:e03638. doi: 10.7554/eLife.03638.

12.

Membrane properties revealed by spatiotemporal response to a local inhomogeneity.

Bitbol AF, Fournier JB.

Biochim Biophys Acta. 2013 Apr;1828(4):1241-9. doi: 10.1016/j.bbamem.2012.11.024. Epub 2012 Nov 29.

13.

Bilayer elasticity at the nanoscale: the need for new terms.

Bitbol AF, Constantin D, Fournier JB.

PLoS One. 2012;7(11):e48306. doi: 10.1371/journal.pone.0048306. Epub 2012 Nov 8.

14.

Forces exerted by a correlated fluid on embedded inclusions.

Bitbol AF, Fournier JB.

Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Jun;83(6 Pt 1):061107. Epub 2011 Jun 8.

PMID:
21797302
15.

Dynamical membrane curvature instability controlled by intermonolayer friction.

Bitbol AF, Fournier JB, Angelova MI, Puff N.

J Phys Condens Matter. 2011 Jul 20;23(28):284102. doi: 10.1088/0953-8984/23/28/284102. Epub 2011 Jun 27.

PMID:
21709326
16.

Membrane stress tensor in the presence of lipid density and composition inhomogeneities.

Bitbol AF, Peliti L, Fournier JB.

Eur Phys J E Soft Matter. 2011 May;34(5):53. doi: 10.1140/epje/i2011-11053-4. Epub 2011 May 26.

PMID:
21614676
17.

Fluctuations of the Casimir-like force between two membrane inclusions.

Bitbol AF, Dommersnes PG, Fournier JB.

Phys Rev E Stat Nonlin Soft Matter Phys. 2010 May;81(5 Pt 1):050903. Epub 2010 May 28.

PMID:
20866178
18.

Scaling and dynamics of washboard roads.

Bitbol AF, Taberlet N, Morris SW, McElwaine JN.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Jun;79(6 Pt 1):061308. Epub 2009 Jun 26.

PMID:
19658502
19.

Characterization of a new sensitive PCR assay for quantification of viral DNA isolated from patients with hepatitis B virus infections.

Thibault V, Pichoud C, Mullen C, Rhoads J, Smith JB, Bitbol A, Thamm S, Zoulim F.

J Clin Microbiol. 2007 Dec;45(12):3948-53. Epub 2007 Oct 17.

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