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Lack of effectiveness of adherence counselling in reversing virological failure among patients on long-term antiretroviral therapy in rural Uganda.

Birungi J, Cui Z, Okoboi S, Kapaata A, Munderi P, Mukajjanga C, Nanfuka M, Nyonyintono MS, Kim J, Zhu J, Kaleebu P, Moore DM.

HIV Med. 2019 Aug 21. doi: 10.1111/hiv.12790. [Epub ahead of print]


Lessons learned from a mobile technology-based intervention informed by behavioral economics to improve ART adherence among youth in Uganda.

MacCarthy S, Mendoza-Graf A, Saya U, Samba C, Birungi J, Okoboi S, Linnemayr S.

AIDS Care. 2019 May 28:1-7. doi: 10.1080/09540121.2019.1622630. [Epub ahead of print]


Genome-wide diversity and demographic dynamics of Cameroon goats and their divergence from east African, north African, and Asian conspecifics.

Tarekegn GM, Wouobeng P, Jaures KS, Mrode R, Edea Z, Liu B, Zhang W, Mwai OA, Dessie T, Tesfaye K, Strandberg E, Berglund B, Mutai C, Osama S, Wolde AT, Birungi J, Djikeng A, Meutchieye F.

PLoS One. 2019 Apr 19;14(4):e0214843. doi: 10.1371/journal.pone.0214843. eCollection 2019.


The effect of different processing methods on nutrient and isoflavone content of soymilk obtained from six varieties of soybean grown in Rwanda.

Niyibituronsa M, Onyango AN, Gaidashova S, Imathiu S, Uwizerwa M, Ochieng EP, Ng'ang'a F, Birungi J, Ghimire S, Harvey J.

Food Sci Nutr. 2018 Oct 25;7(2):457-464. doi: 10.1002/fsn3.812. eCollection 2019 Feb.


Incidence rate of sexually transmitted infections among HIV infected patients on long-term ART in an urban and a rural clinic in Uganda.

Okoboi S, Castelnuovo B, Moore DM, Musaazi J, Kambugu A, Birungi J, Nanfuka M, Van Rie A.

BMC Public Health. 2019 Jan 18;19(1):87. doi: 10.1186/s12889-019-6417-x.


Recruitment and Baseline Characteristics of Participants in the Social, Emotional, and Economic Empowerment Through Knowledge of Group Support Psychotherapy Study (SEEK-GSP): Cluster Randomized Controlled Trial.

Nakimuli-Mpungu E, Musisi S, Wamala K, Okello J, Ndyanabangi S, Birungi J, Nanfuka M, Etukoit M, Mojtabai R, Nachega J, Harari O, Mills E.

JMIR Res Protoc. 2019 Jan 3;8(1):e11560. doi: 10.2196/11560.


A pilot trial of the peer-based distribution of HIV self-test kits among fishermen in Bulisa, Uganda.

Choko AT, Nanfuka M, Birungi J, Taasi G, Kisembo P, Helleringer S.

PLoS One. 2018 Nov 29;13(11):e0208191. doi: 10.1371/journal.pone.0208191. eCollection 2018.


High burden of previously undiagnosed HIV infections and gaps in HIV care cascade for conflict-affected female sex workers in northern Uganda.

Goldenberg SM, Muzaaya G, Akello M, Braschel M, Birungi J, Shannon K.

Int J STD AIDS. 2019 Mar;30(3):275-283. doi: 10.1177/0956462418804658. Epub 2018 Nov 11.


High report of miscarriage among women living with HIV who want to conceive in Uganda.

Finocchario-Kessler S, Goggin K, Staggs V, Wanyenze RK, Beyeza-Kashesya J, Mindry D, Birungi J, Wagner GJ.

BMC Res Notes. 2018 Oct 22;11(1):753. doi: 10.1186/s13104-018-3857-9.


Risky sexual behavior among patients on long-term antiretroviral therapy: a prospective cohort study in urban and rural Uganda.

Okoboi S, Castelnuovo B, Moore DM, Musaazi J, Kambugu A, Birungi J, Kaleebu P, Nanfuka M, Kamya MR, Van Rie A.

AIDS Res Ther. 2018 Oct 19;15(1):15. doi: 10.1186/s12981-018-0203-1.


"How am I going to live?": exploring barriers to ART adherence among adolescents and young adults living with HIV in Uganda.

MacCarthy S, Saya U, Samba C, Birungi J, Okoboi S, Linnemayr S.

BMC Public Health. 2018 Oct 4;18(1):1158. doi: 10.1186/s12889-018-6048-7.


Integrated care for human immunodeficiency virus, diabetes and hypertension in Africa.

Garrib A, Birungi J, Lesikari S, Namakoola I, Njim T, Cuevas L, Niessen L, Mugisha K, Mutungi G, Mghamba J, Ramaiya K, Jaffar S, Mfinanga S, Nyirenda M.

Trans R Soc Trop Med Hyg. 2018 Sep 28. doi: 10.1093/trstmh/try098. [Epub ahead of print]


Study protocol of "Our Choice": a randomized controlled trial of the integration of safer conception counseling to transform HIV family planning services in Uganda.

Goggin K, Hurley EA, Beyeza-Kashesya J, Gwokyalya V, Finocchario-Kessler S, Birungi J, Mindry D, Wanyenze RK, Wagner GJ.

Implement Sci. 2018 Aug 14;13(1):110. doi: 10.1186/s13012-018-0793-y.


Reduced-representation sequencing identifies small effective population sizes of Anopheles gambiae in the north-western Lake Victoria basin, Uganda.

Wiltshire RM, Bergey CM, Kayondo JK, Birungi J, Mukwaya LG, Emrich SJ, Besansky NJ, Collins FH.

Malar J. 2018 Aug 6;17(1):285. doi: 10.1186/s12936-018-2432-0.


Threats to oral polio vaccine acceptance in Somalia: Polling in an outbreak.

SteelFisher GK, Blendon RJ, Haydarov R, Lodge W 2nd, Caporello H, Guirguis S, Anand S, Birungi J, Williams MR, Ben-Porath EN, O'Reilly D, Sahm C.

Vaccine. 2018 Jul 25;36(31):4716-4724. doi: 10.1016/j.vaccine.2018.06.003. Epub 2018 Jun 27.


Unconditional cash transfers for clinical and economic outcomes among HIV-affected Ugandan households.

Mills EJ, Adhvaryu A, Jakiela P, Birungi J, Okoboi S, Chimulwa TNW, Wanganisi J, Achilla T, Popoff E, Golchi S, Karlan D.

AIDS. 2018 Sep 10;32(14):2023-2031. doi: 10.1097/QAD.0000000000001899.


Sexual Health Consequences of Forced Sexual Debut Among Ugandan Women in HIV Serodiscordant Partnerships: Results From the HAARP Study.

Muldoon KA, King R, Zhang W, Birungi J, Nanfuka M, Tibengana S, Afolabi O, Moore DM.

J Interpers Violence. 2018 Jun;33(11):1731-1747. doi: 10.1177/0886260517752155.


Variations in mitochondrial cytochrome b region among Ethiopian indigenous cattle populations assert Bos taurus maternal origin and historical dynamics.

Tarekegn GM, Ji XY, Bai X, Liu B, Zhang W, Birungi J, Djikeng A, Tesfaye K.

Asian-Australas J Anim Sci. 2018 Sep;31(9):1393-1400. doi: 10.5713/ajas.17.0596. Epub 2018 Apr 11.


High rates of Unintended Pregnancies among Young Women Sex Workers in Conflict-affected Northern Uganda: The Social Contexts of Brothels/Lodges and Substance Use.

Duff P, Muzaaya G, Muldoon K, Dobrer S, Akello M, Birungi J, Shannon K.

Afr J Reprod Health. 2017 Jun;21(2):64-72.


Utilization of prevention of mother-to-child transmission (PMTCT) services among pregnant women in HIV care in Uganda: a 24-month cohort of women from pre-conception to post-delivery.

Wanyenze RK, Goggin K, Finocchario-Kessler S, Beyeza-Kashesya J, Mindry D, Birungi J, Woldetsadik M, Wagner GJ.

BMC Res Notes. 2018 Mar 22;11(1):187. doi: 10.1186/s13104-018-3304-y.


Changes in Providers' Self-Efficacy and Intentions to Provide Safer Conception Counseling Over 24 Months.

Goggin K, Hurley EA, Wagner GJ, Staggs V, Finocchario-Kessler S, Beyeza-Kashesya J, Mindry D, Birungi J, Wanyenze RK.

AIDS Behav. 2018 Sep;22(9):2895-2905. doi: 10.1007/s10461-018-2049-x.


Stigma gets in my way: Factors affecting client-provider communication regarding childbearing among people living with HIV in Uganda.

Beyeza-Kashesya J, Wanyenze RK, Goggin K, Finocchario-Kessler S, Woldetsadik MA, Mindry D, Birungi J, Wagner GJ.

PLoS One. 2018 Feb 20;13(2):e0192902. doi: 10.1371/journal.pone.0192902. eCollection 2018.


Mitochondrial DNA variation reveals maternal origins and demographic dynamics of Ethiopian indigenous goats.

Tarekegn GM, Tesfaye K, Mwai OA, Djikeng A, Dessie T, Birungi J, Osama S, Zergaw N, Alemu A, Achieng G, Tutah J, Mutai C, Njuguna J, Mwacharo JM.

Ecol Evol. 2018 Jan 3;8(3):1543-1553. doi: 10.1002/ece3.3710. eCollection 2018 Feb.


Containment Studies of Transgenic Mosquitoes in Disease Endemic Countries: The Broad Concept of Facilities Readiness.

Quinlan MM, Birungi J, Coulibaly MB, Diabaté A, Facchinelli L, Mukabana WR, Mutunga JM, Nolan T, Raymond P, Traoré SF.

Vector Borne Zoonotic Dis. 2018 Jan;18(1):14-20. doi: 10.1089/vbz.2017.2189.


Social and structural factors increase inconsistent condom use by sex workers' one-time and regular clients in Northern Uganda.

Duff P, Birungi J, Dobrer S, Akello M, Muzaaya G, Shannon K.

AIDS Care. 2018 Jun;30(6):751-759. doi: 10.1080/09540121.2017.1394966. Epub 2017 Oct 25.


Interpersonal and structural contexts of intimate partner violence among female sex workers in conflict-affected northern Uganda.

Erickson M, Goldenberg SM, Master A, Muzaaya G, Akello M, Braschel M, Birungi J, Shannon K.

Women Health. 2018 Aug;58(7):759-773. doi: 10.1080/03630242.2017.1342742. Epub 2017 Aug 29.


Prevalence and Correlates of Use of Safer Conception Methods in a Prospective Cohort of Ugandan HIV-Affected Couples with Fertility Intentions.

Wagner GJ, Linnemayr S, Goggin K, Mindry D, Beyeza-Kashesya J, Finocchario-Kessler S, Robinson E, Birungi J, Wanyenze RK.

AIDS Behav. 2017 Aug;21(8):2479-2487. doi: 10.1007/s10461-017-1732-7.


Incarceration and exposure to internally displaced persons camps associated with reproductive rights abuses among sex workers in northern Uganda.

Erickson M, Goldenberg SM, Akello M, Muzaaya G, Nguyen P, Birungi J, Shannon K.

J Fam Plann Reprod Health Care. 2017 Jul;43(3):201-209. doi: 10.1136/jfprhc-2016-101492. Epub 2017 Feb 9.


Genetic markers associated with resistance to beta-lactam and quinolone antimicrobials in non-typhoidal Salmonella isolates from humans and animals in central Ethiopia.

Eguale T, Birungi J, Asrat D, Njahira MN, Njuguna J, Gebreyes WA, Gunn JS, Djikeng A, Engidawork E.

Antimicrob Resist Infect Control. 2017 Jan 17;6:13. doi: 10.1186/s13756-017-0171-6. eCollection 2017.


Factors associated with long-term antiretroviral therapy attrition among adolescents in rural Uganda: a retrospective study.

Okoboi S, Ssali L, Yansaneh AI, Bakanda C, Birungi J, Nantume S, Okullu JL, Sharp AR, Moore DM, Kalibala S.

J Int AIDS Soc. 2016 Jul 20;19(5 Suppl 4):20841. doi: 10.7448/IAS.19.5.20841. eCollection 2016.


Routines, Hope, and Antiretroviral Treatment among Men and Women in Uganda.

Winchester MS, McGrath JW, Kaawa-Mafigiri D, Namutiibwa F, Ssendegye G, Nalwoga A, Kyarikunda E, Birungi J, Kisakye S, Ayebazibwe N, Walakira EJ, Rwabukwali C.

Med Anthropol Q. 2017 Jun;31(2):237-256. doi: 10.1111/maq.12301. Epub 2016 Aug 21.


War-Related Abduction and History of Incarceration Linked to High Burden of HIV Among Female Sex Workers in Conflict-Affected Northern Uganda.

Goldenberg SM, Muzaaya G, Akello M, Nguyen P, Birungi J, Shannon K.

J Acquir Immune Defic Syndr. 2016 Sep 1;73(1):109-16. doi: 10.1097/QAI.0000000000001030.


'He said, she said': assessing dyadic agreement of reported sexual behaviour and decision-making among an HIV sero-discordant couples cohort in Uganda.

Muldoon KA, Kanters S, Birungi J, King RL, Nyonyintono M, Khanakwa S, Moore DM.

J Fam Plann Reprod Health Care. 2017 Apr;43(2):142-146. doi: 10.1136/jfprhc-2015-101323. Epub 2016 Mar 30.


Feasibility and acceptability of mobile phone short message service as a support for patients receiving antiretroviral therapy in rural Uganda: a cross-sectional study.

Kim J, Zhang W, Nyonyitono M, Lourenco L, Nanfuka M, Okoboi S, Birungi J, Lester RT, Kaleebu P, Munderi P, Moore DM.

J Int AIDS Soc. 2015 Dec 10;18:20311. doi: 10.7448/IAS.18.1.20311. eCollection 2015.


Community-based ART distribution system can effectively facilitate long-term program retention and low-rates of death and virologic failure in rural Uganda.

Okoboi S, Ding E, Persuad S, Wangisi J, Birungi J, Shurgold S, Kato D, Nyonyintono M, Egessa A, Bakanda C, Munderi P, Kaleebu P, Moore DM.

AIDS Res Ther. 2015 Nov 12;12:37. doi: 10.1186/s12981-015-0077-4. eCollection 2015.


Effect of Couples Counselling on Reported HIV Risk Behaviour among HIV Serodiscordant Couples by ART Use, HIV Status and Gender in Rural Uganda.

King R, Min J, Birungi J, Nyonyintono M, Muldoon KA, Khanakwa S, Kaleebu P, Moore DM.

PLoS One. 2015 Sep 18;10(9):e0136531. doi: 10.1371/journal.pone.0136531. eCollection 2015.


Lack of Effectiveness of Antiretroviral Therapy in Preventing HIV Infection in Serodiscordant Couples in Uganda: An Observational Study.

Birungi J, Min JE, Muldoon KA, Kaleebu P, King R, Khanakwa S, Nyonyintono M, Chen Y, Mills EJ, Lyagoba F, Ragonnet-Cronin M, Wangisi J, Lourenco L, Moore DM.

PLoS One. 2015 Jul 14;10(7):e0132182. doi: 10.1371/journal.pone.0132182. eCollection 2015.


Prevalence of Plasmodium falciparum resistance markers to sulfadoxine-pyrimethamine among pregnant women receiving intermittent preventive treatment for malaria in Uganda.

Mbonye AK, Birungi J, Yanow SK, Shokoples S, Malamba S, Alifrangis M, Magnussen P.

Antimicrob Agents Chemother. 2015 Sep;59(9):5475-82. doi: 10.1128/AAC.00507-15. Epub 2015 Jun 29.


Widespread pyrethroid and DDT resistance in the major malaria vector Anopheles funestus in East Africa is driven by metabolic resistance mechanisms.

Mulamba C, Riveron JM, Ibrahim SS, Irving H, Barnes KG, Mukwaya LG, Birungi J, Wondji CS.

PLoS One. 2014 Oct 15;9(10):e110058. doi: 10.1371/journal.pone.0110058. eCollection 2014.


Effectiveness of oral polio vaccination against paralytic poliomyelitis: a matched case-control study in Somalia.

Mahamud A, Kamadjeu R, Webeck J, Mbaeyi C, Baranyikwa MT, Birungi J, Nurbile Y, Ehrhardt D, Shukla H, Chatterjee A, Mulugeta A.

J Infect Dis. 2014 Nov 1;210 Suppl 1:S187-93. doi: 10.1093/infdis/jiu261.


Polio outbreak investigation and response in Somalia, 2013.

Kamadjeu R, Mahamud A, Webeck J, Baranyikwa MT, Chatterjee A, Bile YN, Birungi J, Mbaeyi C, Mulugeta A.

J Infect Dis. 2014 Nov 1;210 Suppl 1:S181-6. doi: 10.1093/infdis/jiu453.


Immune activation alters cellular and humoral responses to yellow fever 17D vaccine.

Muyanja E, Ssemaganda A, Ngauv P, Cubas R, Perrin H, Srinivasan D, Canderan G, Lawson B, Kopycinski J, Graham AS, Rowe DK, Smith MJ, Isern S, Michael S, Silvestri G, Vanderford TH, Castro E, Pantaleo G, Singer J, Gillmour J, Kiwanuka N, Nanvubya A, Schmidt C, Birungi J, Cox J, Haddad EK, Kaleebu P, Fast P, Sekaly RP, Trautmann L, Gaucher D.

J Clin Invest. 2014 Jul;124(7):3147-58. doi: 10.1172/JCI75429. Epub 2014 Jun 9. Erratum in: J Clin Invest. 2014 Oct 1;124(10):4669. Gaucher, Denis [Added].


A lab-on-chip for malaria diagnosis and surveillance.

Taylor BJ, Howell A, Martin KA, Manage DP, Gordy W, Campbell SD, Lam S, Jin A, Polley SD, Samuel RA, Atrazhev A, Stickel AJ, Birungi J, Mbonye AK, Pilarski LM, Acker JP, Yanow SK.

Malar J. 2014 May 9;13:179. doi: 10.1186/1475-2875-13-179.


Decisions, decisions: the importance of condom use decision making among HIV sero-discordant couples in a prospective cohort study in Uganda.

Muldoon KA, Duff PK, Birungi J, Ngolobe MH, Min JE, King R, Nyonyintono M, Chen Y, Shannon K, Khanakwa S, Moore D.

Sex Transm Infect. 2014 Aug;90(5):408-12. doi: 10.1136/sextrans-2013-051326. Epub 2014 Apr 2.


Challenging the paradigm: anthropological perspectives on HIV as a chronic disease.

McGrath JW, Winchester MS, Kaawa-Mafigiri D, Walakira E, Namutiibwa F, Birungi J, Ssendegye G, Nalwoga A, Kyarikunda E, Kisakye S, Ayebazibwe N, Rwabukwali CB.

Med Anthropol. 2014;33(4):303-17. doi: 10.1080/01459740.2014.892483.


Adherence to antiretroviral therapy in Jinja, Uganda: a six-year follow-up study.

Mbonye M, Seeley J, Ssembajja F, Birungi J, Jaffar S.

PLoS One. 2013 Oct 11;8(10):e78243. doi: 10.1371/journal.pone.0078243. eCollection 2013.


A new strategy and its effect on adherence to intermittent preventive treatment of malaria in pregnancy in Uganda.

Mbonye AK, Yanow S, Birungi J, Magnussen P.

BMC Pregnancy Childbirth. 2013 Sep 21;13:178. doi: 10.1186/1471-2393-13-178.


Stigma trajectories among people living with HIV (PLHIV) embarking on a life time journey with antiretroviral drugs in Jinja, Uganda.

Mbonye M, Nakamanya S, Birungi J, King R, Seeley J, Jaffar S.

BMC Public Health. 2013 Sep 5;13:804. doi: 10.1186/1471-2458-13-804.

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