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Items: 1 to 50 of 141

1.

A Single, Shared Triploidy in Three Species of Parasitic Nematodes.

Schoonmaker A, Hao Y, Bird DM, Conant GC.

G3 (Bethesda). 2020 Jan 7;10(1):225-233. doi: 10.1534/g3.119.400650.

2.

Identification of Cytauxzoon felis antigens via protein microarray and assessment of expression library immunization against cytauxzoonosis.

Schreeg ME, Marr HS, Tarigo JL, Sherrill MK, Outi HK, Scholl EH, Bird DM, Vigil A, Hung C, Nakajima R, Liang L, Trieu A, Doolan DL, Thomas JE, Levy MG, Reichard MV, Felgner PL, Cohn LA, Birkenheuer AJ.

Clin Proteomics. 2018 Dec 29;15:44. doi: 10.1186/s12014-018-9218-9. eCollection 2018.

3.

Disparate gain and loss of parasitic abilities among nematode lineages.

Holterman M, Karegar A, Mooijman P, van Megen H, van den Elsen S, Vervoort MTW, Quist CW, Karssen G, Decraemer W, Opperman CH, Bird DM, Kammenga J, Goverse A, Smant G, Helder J.

PLoS One. 2017 Sep 21;12(9):e0185445. doi: 10.1371/journal.pone.0185445. eCollection 2017.

4.

Evaluation of High Dosages of Oral Meloxicam in American Kestrels ( Falco sparverius ).

Summa NM, Guzman DS, Larrat S, Troncy E, Bird DM, Lair S, Fitzgerald G.

J Avian Med Surg. 2017 Jun;31(2):108-116. doi: 10.1647/2015-150.

PMID:
28644089
5.

Networks Underpinning Symbiosis Revealed Through Cross-Species eQTL Mapping.

Guo Y, Fudali S, Gimeno J, DiGennaro P, Chang S, Williamson VM, Bird DM, Nielsen DM.

Genetics. 2017 Aug;206(4):2175-2184. doi: 10.1534/genetics.117.202531. Epub 2017 Jun 22.

6.

Spatiotemporal patterns and relationships among the diet, biochemistry, and exposure to flame retardants in an apex avian predator, the peregrine falcon.

Fernie KJ, Chabot D, Champoux L, Brimble S, Alaee M, Marteinson S, Chen D, Palace V, Bird DM, Letcher RJ.

Environ Res. 2017 Oct;158:43-53. doi: 10.1016/j.envres.2017.05.035. Epub 2017 Jul 3.

PMID:
28599194
7.

Optimizing k-mer size using a variant grid search to enhance de novo genome assembly.

Cha S, Bird DM.

Bioinformation. 2016 Apr 10;12(2):36-40. doi: 10.6026/97320630012036. eCollection 2016.

8.

Mitochondrial Genome Sequences and Structures Aid in the Resolution of Piroplasmida phylogeny.

Schreeg ME, Marr HS, Tarigo JL, Cohn LA, Bird DM, Scholl EH, Levy MG, Wiegmann BM, Birkenheuer AJ.

PLoS One. 2016 Nov 10;11(11):e0165702. doi: 10.1371/journal.pone.0165702. eCollection 2016.

9.

Genetic Drift, Not Life History or RNAi, Determine Long-Term Evolution of Transposable Elements.

Szitenberg A, Cha S, Opperman CH, Bird DM, Blaxter ML, Lunt DH.

Genome Biol Evol. 2016 Oct 5;8(9):2964-2978.

10.

PCR amplification of a multi-copy mitochondrial gene (cox3) improves detection of Cytauxzoon felis infection as compared to a ribosomal gene (18S).

Schreeg ME, Marr HS, Griffith EH, Tarigo JL, Bird DM, Reichard MV, Cohn LA, Levy MG, Birkenheuer AJ.

Vet Parasitol. 2016 Jul 30;225:123-30. doi: 10.1016/j.vetpar.2016.06.013. Epub 2016 Jun 8.

PMID:
27369587
11.

Population census of a large common tern colony with a small unmanned aircraft.

Chabot D, Craik SR, Bird DM.

PLoS One. 2015 Apr 15;10(4):e0122588. doi: 10.1371/journal.pone.0122588. eCollection 2015.

12.

Signatures of adaptation to plant parasitism in nematode genomes.

Bird DM, Jones JT, Opperman CH, Kikuchi T, Danchin EG.

Parasitology. 2015 Feb;142 Suppl 1:S71-84. doi: 10.1017/S0031182013002163. Review.

13.

Improved structural annotation of protein-coding genes in the Meloidogyne hapla genome using RNA-Seq.

Guo Y, Bird DM, Nielsen DM.

Worm. 2014 May 16;3:e29158. doi: 10.4161/worm.29158. eCollection 2014.

14.

Feral cat management.

Lepczyk CA, Conant S, Duffy D, Bird DM, Calver M, Duval FP, Hutchins M, Lohr CA, Loyd KA, Marra PP, Pitt WC, Sizemore G, Sprague R, Temple SA, van Heezik Y, Wallace G.

J Am Vet Med Assoc. 2013 Nov 15;243(10):1391-2. doi: 10.2460/javma.243.10.1391. No abstract available.

PMID:
24171365
15.

Changes in the incubation by American kestrels (Falco sparverius) during exposure to the polybrominated diphenyl ether (PBDE) mixture DE-71.

Sullivan KM, Marteinson SC, Letcher RJ, Bird DM, Ritchie IJ, Shutt JL, Fernie KJ.

J Toxicol Environ Health A. 2013;76(16):978-89. doi: 10.1080/15287394.2013.829759.

PMID:
24156721
16.

A sequence-anchored linkage map of the plant-parasitic nematode Meloidogyne hapla reveals exceptionally high genome-wide recombination.

Thomas VP, Fudali SL, Schaff JE, Liu Q, Scholl EH, Opperman CH, Bird DM, Williamson VM.

G3 (Bethesda). 2012 Jul;2(7):815-24. doi: 10.1534/g3.112.002261. Epub 2012 Jul 1.

17.

The flame retardant β-1,2-dibromo-4-(1,2-dibromoethyl)cyclohexane: fate, fertility, and reproductive success in American kestrels (Falco sparverius).

Marteinson SC, Letcher RJ, Graham L, Kimmins S, Tomy G, Palace VP, Ritchie IJ, Gauthier LT, Bird DM, Fernie KJ.

Environ Sci Technol. 2012 Aug 7;46(15):8440-7. doi: 10.1021/es301032a. Epub 2012 Jul 20.

PMID:
22775271
18.

Dietary exposure to technical hexabromocyclododecane (HBCD) alters courtship, incubation and parental behaviors in American kestrels (Falco sparverius).

Marteinson SC, Bird DM, Letcher RJ, Sullivan KM, Ritchie IJ, Fernie KJ.

Chemosphere. 2012 Nov;89(9):1077-83. doi: 10.1016/j.chemosphere.2012.05.073. Epub 2012 Jun 27.

PMID:
22743184
19.

Diet exposure to technical hexabromocyclododecane (HBCD) affects testes and circulating testosterone and thyroxine levels in American kestrels (Falco sparverius).

Marteinson SC, Kimmins S, Letcher RJ, Palace VP, Bird DM, Ritchie IJ, Fernie KJ.

Environ Res. 2011 Nov;111(8):1116-23. doi: 10.1016/j.envres.2011.08.006. Epub 2011 Sep 13.

PMID:
21917248
20.

Reproductive changes in American kestrels (Falco sparverius) in relation to exposure to technical hexabromocyclododecane flame retardant.

Fernie KJ, Marteinson SC, Bird DM, Ritchie IJ, Letcher RJ.

Environ Toxicol Chem. 2011 Nov;30(11):2570-5. doi: 10.1002/etc.652. Epub 2011 Sep 19.

PMID:
21898552
21.

RNAi effector diversity in nematodes.

Dalzell JJ, McVeigh P, Warnock ND, Mitreva M, Bird DM, Abad P, Fleming CC, Day TA, Mousley A, Marks NJ, Maule AG.

PLoS Negl Trop Dis. 2011 Jun;5(6):e1176. doi: 10.1371/journal.pntd.0001176. Epub 2011 Jun 7.

22.

Guidance in Kagome-like photonic crystal fibres II: perturbation theory for a realistic fibre structure.

Chen L, Bird DM.

Opt Express. 2011 Mar 28;19(7):6957-68. doi: 10.1364/OE.19.006957.

PMID:
21451721
23.

Guidance in Kagome-like photonic crystal fibres I: analysis of an ideal fibre structure.

Chen L, Pearce GJ, Birks TA, Bird DM.

Opt Express. 2011 Mar 28;19(7):6945-56. doi: 10.1364/OE.19.006945.

PMID:
21451720
24.

Computational and phylogenetic validation of nematode horizontal gene transfer.

Scholl EH, Bird DM.

BMC Biol. 2011 Feb 22;9:9. doi: 10.1186/1741-7007-9-9.

25.

Embryonic exposure to the polybrominated diphenyl ether mixture, DE-71, affects testes and circulating testosterone concentrations in adult American kestrels (Falco sparverius).

Marteinson SC, Kimmins S, Bird DM, Shutt JL, Letcher RJ, Ritchie IJ, Fernie KJ.

Toxicol Sci. 2011 May;121(1):168-76. doi: 10.1093/toxsci/kfr027. Epub 2011 Jan 31.

PMID:
21282710
26.

Changes in plasma retinol of American kestrels (Falco sparverius) in response to dietary or in ovo exposure to environmentally relevant concentrations of a penta-brominated diphenyl ether mixture, DE-71.

Sullivan KM, Bird DM, Ritchie JI, Shutt JL, Letcher RJ, Fernie KJ.

J Toxicol Environ Health A. 2010;73(23):1645-54. doi: 10.1080/15287394.2010.501720.

PMID:
20967677
27.

Multi-generational effects of polybrominated diphenylethers exposure: embryonic exposure of male American kestrels (Falco sparverius) to DE-71 alters reproductive success and behaviors.

Marteinson SC, Bird DM, Shutt JL, Letcher RJ, Ritchie IJ, Fernie KJ.

Environ Toxicol Chem. 2010 Aug;29(8):1740-7. doi: 10.1002/etc.200.

PMID:
20821627
28.

Proteomic and bioinformatic analysis of the root-knot nematode Meloidogyne hapla: the basis for plant parasitism.

Mbeunkui F, Scholl EH, Opperman CH, Goshe MB, Bird DM.

J Proteome Res. 2010 Oct 1;9(10):5370-81. doi: 10.1021/pr1006069.

PMID:
20804128
29.

Prevalence of West Nile virus in wild American Kestrels (Falco sparverius) of southern Quebec, Canada.

Dubé MC, Bird DM, Dibernardo A, Lindsay LR, Charest H.

J Wildl Dis. 2010 Apr;46(2):603-7.

PMID:
20688659
30.

What conservation biologists can do to counter trap-neuter-return: response to Longcore et al.

Lepczyk CA, Dauphiné N, Bird DM, Conant S, Cooper RJ, Duffy DC, Hatley PJ, Marra PP, Stone E, Temple SA.

Conserv Biol. 2010 Apr;24(2):627-9. doi: 10.1111/j.1523-1739.2009.01426.x. Epub 2010 Jan 19. No abstract available.

PMID:
20088960
31.

The genomes of root-knot nematodes.

Bird DM, Williamson VM, Abad P, McCarter J, Danchin EG, Castagnone-Sereno P, Opperman CH.

Annu Rev Phytopathol. 2009;47:333-51. doi: 10.1146/annurev-phyto-080508-081839. Review.

PMID:
19400640
32.

Comment on "role of electron-hole pair excitations in the dissociative adsorption of diatomic molecules on metal surfaces".

Luntz AC, Makkonen I, Persson M, Holloway S, Bird DM, Mizielinski MS.

Phys Rev Lett. 2009 Mar 13;102(10):109601; author reply 109602. Epub 2009 Mar 10. No abstract available.

PMID:
19392170
33.

Environmentally relevant concentrations of DE-71 and HBCD alter eggshell thickness and reproductive success of American kestrels.

Fernie KJ, Shutt JL, Letcher RJ, Ritchie IJ, Bird DM.

Environ Sci Technol. 2009 Mar 15;43(6):2124-30.

PMID:
19368224
34.

The secret(ion) life of worms.

Bird DM, Opperman CH.

Genome Biol. 2009;10(1):205. doi: 10.1186/gb-2009-10-1-205. Epub 2009 Jan 28. Review.

35.

Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism.

Opperman CH, Bird DM, Williamson VM, Rokhsar DS, Burke M, Cohn J, Cromer J, Diener S, Gajan J, Graham S, Houfek TD, Liu Q, Mitros T, Schaff J, Schaffer R, Scholl E, Sosinski BR, Thomas VP, Windham E.

Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14802-7. doi: 10.1073/pnas.0805946105. Epub 2008 Sep 22.

36.

SILIP: a novel stable isotope labeling method for in planta quantitative proteomic analysis.

Schaff JE, Mbeunkui F, Blackburn K, Bird DM, Goshe MB.

Plant J. 2008 Dec;56(5):840-54. doi: 10.1111/j.1365-313X.2008.03639.x. Epub 2008 Sep 5.

37.
38.

Bioaccumulation and biotransformation of 61 polychlorinated biphenyl and four polybrominated diphenyl ether congeners in juvenile American kestrels (Falco sparverius).

Drouillard KG, Fernie KJ, Letcher RJ, Shutt LJ, Whitehead M, Gebink W, Bird DM.

Environ Toxicol Chem. 2007 Feb;26(2):313-24.

PMID:
17713220
39.

Comprehensive transcriptome profiling in tomato reveals a role for glycosyltransferase in Mi-mediated nematode resistance.

Schaff JE, Nielsen DM, Smith CP, Scholl EH, Bird DM.

Plant Physiol. 2007 Jun;144(2):1079-92. Epub 2007 Apr 13.

40.

Spectrum of electronic excitations due to the adsorption of atoms on metal surfaces.

Mizielinski MS, Bird DM, Persson M, Holloway S.

J Chem Phys. 2007 Jan 21;126(3):034705. Erratum in: J Chem Phys. 2007 Jun 14;126(22):229901.

PMID:
17249894
41.

All solid photonic bandgap fiber based on an array of oriented rectangular high index rods.

Wang A, Pearce GJ, Luan F, Bird DM, Birks TA, Knight JC.

Opt Express. 2006 Oct 30;14(22):10844-50.

PMID:
19529497
42.

Approximate band structure calculation for photonic bandgap fibres.

Birks TA, Pearce GJ, Bird DM.

Opt Express. 2006 Oct 2;14(20):9483-90.

PMID:
19529335
43.

Design of low-loss and highly birefringent hollow-core photonic crystal fiber.

Roberts PJ, Williams DP, Sabert H, Mangan BJ, Bird DM, Birks TA, Knight JC, Russell PS.

Opt Express. 2006 Aug 7;14(16):7329-41.

PMID:
19529102
44.

Brood patches of American kestrels altered by experimental exposure to PCBs.

Fisher SA, Bortolotti GR, Fernie KJ, Bird DM, Smits JE.

J Toxicol Environ Health A. 2006 Sep;69(17):1603-12.

PMID:
16854788
45.

Changes in the growth, but not the survival, of American kestrels (Falco sparverius) exposed to environmentally relevant polybrominated diphenyl ethers.

Fernie KJ, Laird Shutt J, Ritchie IJ, Letcher RJ, Drouillard K, Bird DM.

J Toxicol Environ Health A. 2006 Aug;69(16):1541-54.

PMID:
16854784
46.

An improved photonic bandgap fiber based on an array of rings.

Stone JM, Pearce GJ, Luan F, Birks TA, Knight JC, George AK, Bird DM.

Opt Express. 2006 Jun 26;14(13):6291-6.

PMID:
19516803
47.

Bend loss in all-solid bandgap fibres.

Birks TA, Luan F, Pearce GJ, Wang A, Knight JC, Bird DM.

Opt Express. 2006 Jun 12;14(12):5688-98.

PMID:
19516738
48.

A Method for Generating Meloidogyne incognita Males.

Snyder DW, Opperman CH, Bird DM.

J Nematol. 2006 Jun;38(2):192-4.

49.

Experimental demonstration of the frequency shift of bandgaps in photonic crystal fibers due to refractive index scaling.

Antonopoulos G, Benabid F, Birks TA, Bird DM, Knight JC, Russell PS.

Opt Express. 2006 Apr 3;14(7):3000-6.

PMID:
19516439
50.

A Method for Isolation of Pasteuria penetrans Endospores for Bioassay and Genomic Studies.

Waterman JT, Bird DM, Opperman CH.

J Nematol. 2006 Mar;38(1):165-7.

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