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Items: 1 to 50 of 96

1.

Combinatorial recognition of clustered RNA elements by the multidomain RNA-binding protein IMP3.

Schneider T, Hung LH, Aziz M, Wilmen A, Thaum S, Wagner J, Janowski R, Müller S, Schreiner S, Friedhoff P, Hüttelmaier S, Niessing D, Sattler M, Schlundt A, Bindereif A.

Nat Commun. 2019 May 22;10(1):2266. doi: 10.1038/s41467-019-09769-8.

2.

Functional sequestration of microRNA-122 from Hepatitis C Virus by circular RNA sponges.

Jost I, Shalamova LA, Gerresheim GK, Niepmann M, Bindereif A, Rossbach O.

RNA Biol. 2018;15(8):1032-1039. doi: 10.1080/15476286.2018.1435248. Epub 2018 Feb 28.

3.

Selective release of circRNAs in platelet-derived extracellular vesicles.

Preußer C, Hung LH, Schneider T, Schreiner S, Hardt M, Moebus A, Santoso S, Bindereif A.

J Extracell Vesicles. 2018 Jan 15;7(1):1424473. doi: 10.1080/20013078.2018.1424473. eCollection 2018.

4.

The lncRNA GATA6-AS epigenetically regulates endothelial gene expression via interaction with LOXL2.

Neumann P, Jaé N, Knau A, Glaser SF, Fouani Y, Rossbach O, Krüger M, John D, Bindereif A, Grote P, Boon RA, Dimmeler S.

Nat Commun. 2018 Jan 16;9(1):237. doi: 10.1038/s41467-017-02431-1.

5.

Northern Blot Analysis of Circular RNAs.

Schneider T, Schreiner S, Preußer C, Bindereif A, Rossbach O.

Methods Mol Biol. 2018;1724:119-133. doi: 10.1007/978-1-4939-7562-4_10.

PMID:
29322445
6.

Circular RNAs: Coding or noncoding?

Schneider T, Bindereif A.

Cell Res. 2017 Jun;27(6):724-725. doi: 10.1038/cr.2017.70. Epub 2017 May 16.

7.

Adenosine-to-inosine RNA editing controls cathepsin S expression in atherosclerosis by enabling HuR-mediated post-transcriptional regulation.

Stellos K, Gatsiou A, Stamatelopoulos K, Perisic Matic L, John D, Lunella FF, Jaé N, Rossbach O, Amrhein C, Sigala F, Boon RA, Fürtig B, Manavski Y, You X, Uchida S, Keller T, Boeckel JN, Franco-Cereceda A, Maegdefessel L, Chen W, Schwalbe H, Bindereif A, Eriksson P, Hedin U, Zeiher AM, Dimmeler S.

Nat Med. 2016 Oct;22(10):1140-1150. doi: 10.1038/nm.4172. Epub 2016 Sep 5.

PMID:
27595325
8.

CircRNA-protein complexes: IMP3 protein component defines subfamily of circRNPs.

Schneider T, Hung LH, Schreiner S, Starke S, Eckhof H, Rossbach O, Reich S, Medenbach J, Bindereif A.

Sci Rep. 2016 Aug 11;6:31313. doi: 10.1038/srep31313.

9.

Eukaryotic non-coding RNAs: new targets for diagnostics and therapeutics?

Rossbach O, Bindereif A.

Pharmazie. 2016 Jan;71(1):3-7. Review.

PMID:
26867346
10.

The polyadenylation complex of Trypanosoma brucei: Characterization of the functional poly(A) polymerase.

Koch H, Raabe M, Urlaub H, Bindereif A, Preußer C.

RNA Biol. 2016;13(2):221-31. doi: 10.1080/15476286.2015.1130208.

11.

The Signature of the Five-Stranded vRRM Fold Defined by Functional, Structural and Computational Analysis of the hnRNP L Protein.

Blatter M, Dunin-Horkawicz S, Grishina I, Maris C, Thore S, Maier T, Bindereif A, Bujnicki JM, Allain FH.

J Mol Biol. 2015 Sep 25;427(19):3001-22. doi: 10.1016/j.jmb.2015.05.020. Epub 2015 Jun 5.

PMID:
26051023
12.

RBM28, a protein deficient in ANE syndrome, regulates hair follicle growth via miR-203 and p63.

Warshauer E, Samuelov L, Sarig O, Vodo D, Bindereif A, Kanaan M, Gat U, Fuchs-Telem D, Shomron N, Farberov L, Pasmanik-Chor M, Nardini G, Winkler E, Meilik B, Petit I, Aberdam D, Paus R, Sprecher E, Nousbeck J.

Exp Dermatol. 2015 Aug;24(8):618-22. doi: 10.1111/exd.12737. Epub 2015 May 26.

PMID:
25939713
13.

Pre-mRNA splicing: from protein-coding to noncoding RNAs.

Bindereif A.

RNA. 2015 Apr;21(4):571-2. doi: 10.1261/rna.050070.115. No abstract available.

14.

Exon circularization requires canonical splice signals.

Starke S, Jost I, Rossbach O, Schneider T, Schreiner S, Hung LH, Bindereif A.

Cell Rep. 2015 Jan 6;10(1):103-11. doi: 10.1016/j.celrep.2014.12.002. Epub 2014 Dec 24.

15.

ER stress: how trypanosomes deal with it.

Bindereif A, Preußer C.

Trends Parasitol. 2014 Dec;30(12):549-50. doi: 10.1016/j.pt.2014.10.006. Epub 2014 Nov 12.

PMID:
25457395
16.

RBM24 is a major regulator of muscle-specific alternative splicing.

Yang J, Hung LH, Licht T, Kostin S, Looso M, Khrameeva E, Bindereif A, Schneider A, Braun T.

Dev Cell. 2014 Oct 13;31(1):87-99. doi: 10.1016/j.devcel.2014.08.025.

17.

Genome-wide RNA-binding analysis of the trypanosome U1 snRNP proteins U1C and U1-70K reveals cis/trans-spliceosomal network.

Preußer C, Rossbach O, Hung LH, Li D, Bindereif A.

Nucleic Acids Res. 2014 Jun;42(10):6603-15. doi: 10.1093/nar/gku286. Epub 2014 Apr 19.

18.

Crosslinking-immunoprecipitation (iCLIP) analysis reveals global regulatory roles of hnRNP L.

Rossbach O, Hung LH, Khrameeva E, Schreiner S, König J, Curk T, Zupan B, Ule J, Gelfand MS, Bindereif A.

RNA Biol. 2014;11(2):146-55. doi: 10.4161/rna.27991. Epub 2014 Feb 7.

19.

A novel intra-U1 snRNP cross-regulation mechanism: alternative splicing switch links U1C and U1-70K expression.

Rösel-Hillgärtner TD, Hung LH, Khrameeva E, Le Querrec P, Gelfand MS, Bindereif A.

PLoS Genet. 2013;9(10):e1003856. doi: 10.1371/journal.pgen.1003856. Epub 2013 Oct 17.

20.

Unraveling RNA-mediated networks: new insights from new technologies.

Rossbach O, Bindereif A.

Biol Chem. 2014 Jan;395(1):51-60. doi: 10.1515/hsz-2013-0218. Review.

PMID:
23959691
21.

Exo-endo trans splicing: a new way to link.

Preußer C, Bindereif A.

Cell Res. 2013 Sep;23(9):1071-2. doi: 10.1038/cr.2013.105. Epub 2013 Aug 6.

22.

mRNA splicing in trypanosomes.

Preußer C, Jaé N, Bindereif A.

Int J Med Microbiol. 2012 Oct;302(4-5):221-4. doi: 10.1016/j.ijmm.2012.07.004. Epub 2012 Sep 7. Review.

PMID:
22964417
23.

YB-1 binds to CAUC motifs and stimulates exon inclusion by enhancing the recruitment of U2AF to weak polypyrimidine tracts.

Wei WJ, Mu SR, Heiner M, Fu X, Cao LJ, Gong XF, Bindereif A, Hui J.

Nucleic Acids Res. 2012 Sep 1;40(17):8622-36. Epub 2012 Jun 22.

24.

HnRNP L and L-like cooperate in multiple-exon regulation of CD45 alternative splicing.

Preussner M, Schreiner S, Hung LH, Porstner M, Jäck HM, Benes V, Rätsch G, Bindereif A.

Nucleic Acids Res. 2012 Jul;40(12):5666-78. doi: 10.1093/nar/gks221. Epub 2012 Mar 8.

25.

RNA-Seq analysis in mutant zebrafish reveals role of U1C protein in alternative splicing regulation.

Rösel TD, Hung LH, Medenbach J, Donde K, Starke S, Benes V, Rätsch G, Bindereif A.

EMBO J. 2011 May 18;30(10):1965-76. doi: 10.1038/emboj.2011.106. Epub 2011 Apr 5.

26.

snRNA-specific role of SMN in trypanosome snRNP biogenesis in vivo.

Jaé N, Preusser C, Krüger T, Tkacz ID, Engstler M, Michaeli S, Bindereif A.

RNA Biol. 2011 Jan-Feb;8(1):90-100. Epub 2011 Jan 1.

27.

Essential role of a trypanosome U4-specific Sm core protein in small nuclear ribonucleoprotein assembly and splicing.

Jaé N, Wang P, Gu T, Hühn M, Palfi Z, Urlaub H, Bindereif A.

Eukaryot Cell. 2010 Mar;9(3):379-86. doi: 10.1128/EC.00353-09. Epub 2010 Jan 15.

28.

HnRNP L-mediated regulation of mammalian alternative splicing by interference with splice site recognition.

Heiner M, Hui J, Schreiner S, Hung LH, Bindereif A.

RNA Biol. 2010 Jan-Feb;7(1):56-64. Epub 2010 Jan 21.

PMID:
19946215
29.

Proteomic identification of heterogeneous nuclear ribonucleoprotein L as a novel component of SLM/Sam68 Nuclear Bodies.

Rajan P, Dalgliesh C, Bourgeois CF, Heiner M, Emami K, Clark EL, Bindereif A, Stevenin J, Robson CN, Leung HY, Elliott DJ.

BMC Cell Biol. 2009 Nov 13;10:82. doi: 10.1186/1471-2121-10-82.

30.

SMN-assisted assembly of snRNP-specific Sm cores in trypanosomes.

Palfi Z, Jaé N, Preusser C, Kaminska KH, Bujnicki JM, Lee JH, Günzl A, Kambach C, Urlaub H, Bindereif A.

Genes Dev. 2009 Jul 15;23(14):1650-64. doi: 10.1101/gad.526109.

31.

Special Sm core complex functions in assembly of the U2 small nuclear ribonucleoprotein of Trypanosoma brucei.

Preusser C, Palfi Z, Bindereif A.

Eukaryot Cell. 2009 Aug;8(8):1228-34. doi: 10.1128/EC.00090-09. Epub 2009 Jun 19.

32.

Auto- and cross-regulation of the hnRNP L proteins by alternative splicing.

Rossbach O, Hung LH, Schreiner S, Grishina I, Heiner M, Hui J, Bindereif A.

Mol Cell Biol. 2009 Mar;29(6):1442-51. doi: 10.1128/MCB.01689-08. Epub 2009 Jan 5.

33.

3'-cyclic phosphorylation of U6 snRNA leads to recruitment of recycling factor p110 through LSm proteins.

Licht K, Medenbach J, Lührmann R, Kambach C, Bindereif A.

RNA. 2008 Aug;14(8):1532-8. doi: 10.1261/rna.1129608. Epub 2008 Jun 20.

34.

Alopecia, neurological defects, and endocrinopathy syndrome caused by decreased expression of RBM28, a nucleolar protein associated with ribosome biogenesis.

Nousbeck J, Spiegel R, Ishida-Yamamoto A, Indelman M, Shani-Adir A, Adir N, Lipkin E, Bercovici S, Geiger D, van Steensel MA, Steijlen PM, Bergman R, Bindereif A, Choder M, Shalev S, Sprecher E.

Am J Hum Genet. 2008 May;82(5):1114-21. doi: 10.1016/j.ajhg.2008.03.014. Epub 2008 Apr 24.

35.

Diverse roles of hnRNP L in mammalian mRNA processing: a combined microarray and RNAi analysis.

Hung LH, Heiner M, Hui J, Schreiner S, Benes V, Bindereif A.

RNA. 2008 Feb;14(2):284-96. Epub 2007 Dec 11.

36.

Network of coregulated spliceosome components revealed by zebrafish mutant in recycling factor p110.

Trede NS, Medenbach J, Damianov A, Hung LH, Weber GJ, Paw BH, Zhou Y, Hersey C, Zapata A, Keefe M, Barut BA, Stuart AB, Katz T, Amemiya CT, Zon LI, Bindereif A.

Proc Natl Acad Sci U S A. 2007 Apr 17;104(16):6608-13. Epub 2007 Apr 6.

37.

Alternative splicing in intron 13 of the human eNOS gene: a potential mechanism for regulating eNOS activity.

Lorenz M, Hewing B, Hui J, Zepp A, Baumann G, Bindereif A, Stangl V, Stangl K.

FASEB J. 2007 May;21(7):1556-64. Epub 2007 Jan 30.

PMID:
17264164
38.

Human RBM28 protein is a specific nucleolar component of the spliceosomal snRNPs.

Damianov A, Kann M, Lane WS, Bindereif A.

Biol Chem. 2006 Oct-Nov;387(10-11):1455-60.

PMID:
17081119
39.

Sm core variation in spliceosomal small nuclear ribonucleoproteins from Trypanosoma brucei.

Wang P, Palfi Z, Preusser C, Lücke S, Lane WS, Kambach C, Bindereif A.

EMBO J. 2006 Oct 4;25(19):4513-23. Epub 2006 Sep 14.

40.
41.

mRNA splicing in Trypanosoma brucei: branch-point mapping reveals differences from the canonical U2 snRNA-mediated recognition.

Lücke S, Jürchott K, Hung LH, Bindereif A.

Mol Biochem Parasitol. 2005 Aug;142(2):248-51. No abstract available.

PMID:
15923047
42.

Intronic CA-repeat and CA-rich elements: a new class of regulators of mammalian alternative splicing.

Hui J, Hung LH, Heiner M, Schreiner S, Neumüller N, Reither G, Haas SA, Bindereif A.

EMBO J. 2005 Jun 1;24(11):1988-98. Epub 2005 May 12.

43.

U1 small nuclear RNP from Trypanosoma brucei: a minimal U1 snRNA with unusual protein components.

Palfi Z, Schimanski B, Günzl A, Lücke S, Bindereif A.

Nucleic Acids Res. 2005 Apr 29;33(8):2493-503. Print 2005.

44.

Human U4/U6 snRNP recycling factor p110: mutational analysis reveals the function of the tetratricopeptide repeat domain in recycling.

Medenbach J, Schreiner S, Liu S, Lührmann R, Bindereif A.

Mol Cell Biol. 2004 Sep;24(17):7392-401.

45.

Recycling of the U12-type spliceosome requires p110, a component of the U6atac snRNP.

Damianov A, Schreiner S, Bindereif A.

Mol Cell Biol. 2004 Feb;24(4):1700-8.

46.

Novel functional role of CA repeats and hnRNP L in RNA stability.

Hui J, Reither G, Bindereif A.

RNA. 2003 Aug;9(8):931-6.

47.

HnRNP L stimulates splicing of the eNOS gene by binding to variable-length CA repeats.

Hui J, Stangl K, Lane WS, Bindereif A.

Nat Struct Biol. 2003 Jan;10(1):33-7.

PMID:
12447348
48.

Analysis of RNA-protein complexes by oligonucleotide-targeted RNase H digestion.

Günzl A, Palfi Z, Bindereif A.

Methods. 2002 Feb;26(2):162-9.

PMID:
12054893
49.

Biochemical and functional characterization of the cis-spliceosomal U1 small nuclear RNP from Trypanosoma brucei.

Palfi Z, Lane WS, Bindereif A.

Mol Biochem Parasitol. 2002 May;121(2):233-43.

PMID:
12034457
50.

p110, a novel human U6 snRNP protein and U4/U6 snRNP recycling factor.

Bell M, Schreiner S, Damianov A, Reddy R, Bindereif A.

EMBO J. 2002 Jun 3;21(11):2724-35.

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