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An Evolutionary Perspective on Ethylene Sensing in Microorganisms.

Papon N, Binder BM.

Trends Microbiol. 2019 Mar;27(3):193-196. doi: 10.1016/j.tim.2018.12.002. Epub 2019 Jan 10.


TAMMiCol: Tool for analysis of the morphology of microbial colonies.

Tronnolone H, Gardner JM, Sundstrom JF, Jiranek V, Oliver SG, Binder BJ.

PLoS Comput Biol. 2018 Dec 3;14(12):e1006629. doi: 10.1371/journal.pcbi.1006629. eCollection 2018 Dec.


Characterizing the shape patterns of dimorphic yeast pseudohyphae.

Gontar A, Bottema MJ, Binder BJ, Tronnolone H.

R Soc Open Sci. 2018 Oct 17;5(10):180820. doi: 10.1098/rsos.180820. eCollection 2018 Oct.


More than keratitis, ichthyosis, and deafness: Multisystem effects of lethal GJB2 mutations.

Lilly E, Bunick CG, Maley AM, Zhang S, Spraker MK, Theos AJ, Vivar KL, Seminario-Vidal L, Bennett AE, Sidbury R, Ogawa Y, Akiyama M, Binder B, Hadj-Rabia S, Morotti RA, Glusac EJ, Choate KA, Richard G, Milstone LM.

J Am Acad Dermatol. 2019 Mar;80(3):617-625. doi: 10.1016/j.jaad.2018.09.042. Epub 2018 Oct 2.


Canonical and noncanonical ethylene signaling pathways that regulate Arabidopsis susceptibility to the cyst nematode Heterodera schachtii.

Piya S, Binder BM, Hewezi T.

New Phytol. 2019 Jan;221(2):946-959. doi: 10.1111/nph.15400. Epub 2018 Aug 23.


Unique and Common Features of Innate-Like Human Vδ2+ γδT Cells and Mucosal-Associated Invariant T Cells.

Provine NM, Binder B, FitzPatrick MEB, Schuch A, Garner LC, Williamson KD, van Wilgenburg B, Thimme R, Klenerman P, Hofmann M.

Front Immunol. 2018 Apr 23;9:756. doi: 10.3389/fimmu.2018.00756. eCollection 2018.


Diffusion-Limited Growth of Microbial Colonies.

Tronnolone H, Tam A, Szenczi Z, Green JEF, Balasuriya S, Tek EL, Gardner JM, Sundstrom JF, Jiranek V, Oliver SG, Binder BJ.

Sci Rep. 2018 Apr 16;8(1):5992. doi: 10.1038/s41598-018-23649-z.


Nutrient-limited growth with non-linear cell diffusion as a mechanism for floral pattern formation in yeast biofilms.

Tam A, Green JEF, Balasuriya S, Tek EL, Gardner JM, Sundstrom JF, Jiranek V, Binder BJ.

J Theor Biol. 2018 Jul 7;448:122-141. doi: 10.1016/j.jtbi.2018.04.004. Epub 2018 Apr 7.


Structural Impact of Phosphorylation and Dielectric Constant Variation on Synaptotagmin's IDR.

Fealey ME, Binder BP, Uversky VN, Hinderliter A, Thomas DD.

Biophys J. 2018 Feb 6;114(3):550-561. doi: 10.1016/j.bpj.2017.12.013.


Identification of Transcriptional and Receptor Networks That Control Root Responses to Ethylene.

Harkey AF, Watkins JM, Olex AL, DiNapoli KT, Lewis DR, Fetrow JS, Binder BM, Muday GK.

Plant Physiol. 2018 Mar;176(3):2095-2118. doi: 10.1104/pp.17.00907. Epub 2017 Dec 19.


Understanding interactions between populations: Individual based modelling and quantification using pair correlation functions.

Dini S, Binder BJ, Green JEF.

J Theor Biol. 2018 Feb 14;439:50-64. doi: 10.1016/j.jtbi.2017.11.014. Epub 2017 Dec 7.


Ethylene Receptors Signal via a Noncanonical Pathway to Regulate Abscisic Acid Responses.

Bakshi A, Piya S, Fernandez JC, Chervin C, Hewezi T, Binder BM.

Plant Physiol. 2018 Jan;176(1):910-929. doi: 10.1104/pp.17.01321. Epub 2017 Nov 20.


Controlled Self-assembly of Stem Cell Aggregates Instructs Pluripotency and Lineage Bias.

Xie AW, Binder BYK, Khalil AS, Schmitt SK, Johnson HJ, Zacharias NA, Murphy WL.

Sci Rep. 2017 Oct 25;7(1):14070. doi: 10.1038/s41598-017-14325-9.


Quantifying the dominant growth mechanisms of dimorphic yeast using a lattice-based model.

Tronnolone H, Gardner JM, Sundstrom JF, Jiranek V, Oliver SG, Binder BJ.

J R Soc Interface. 2017 Sep;14(134). pii: 20170314. doi: 10.1098/rsif.2017.0314.


Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences.

Bucksch A, Atta-Boateng A, Azihou AF, Battogtokh D, Baumgartner A, Binder BM, Braybrook SA, Chang C, Coneva V, DeWitt TJ, Fletcher AG, Gehan MA, Diaz-Martinez DH, Hong L, Iyer-Pascuzzi AS, Klein LL, Leiboff S, Li M, Lynch JP, Maizel A, Maloof JN, Markelz RJC, Martinez CC, Miller LA, Mio W, Palubicki W, Poorter H, Pradal C, Price CA, Puttonen E, Reese JB, Rellán-Álvarez R, Spalding EP, Sparks EE, Topp CN, Williams JH, Chitwood DH.

Front Plant Sci. 2017 Jun 9;8:900. doi: 10.3389/fpls.2017.00900. eCollection 2017. Review.


The Development of Indicator Cotton Swabs for the Detection of pH in Wounds.

Schaude C, Fröhlich E, Meindl C, Attard J, Binder B, Mohr GJ.

Sensors (Basel). 2017 Jun 12;17(6). pii: E1365. doi: 10.3390/s17061365.


Triplin, a small molecule, reveals copper ion transport in ethylene signaling from ATX1 to RAN1.

Li W, Lacey RF, Ye Y, Lu J, Yeh KC, Xiao Y, Li L, Wen CK, Binder BM, Zhao Y.

PLoS Genet. 2017 Apr 7;13(4):e1006703. doi: 10.1371/journal.pgen.1006703. eCollection 2017 Apr.


Biofunctionalized Plants as Diverse Biomaterials for Human Cell Culture.

Fontana G, Gershlak J, Adamski M, Lee JS, Matsumoto S, Le HD, Binder B, Wirth J, Gaudette G, Murphy WL.

Adv Healthc Mater. 2017 Apr;6(8). doi: 10.1002/adhm.201601225. Epub 2017 Mar 20.


Inhibitors of Ethylene Biosynthesis and Signaling.

Schaller GE, Binder BM.

Methods Mol Biol. 2017;1573:223-235. doi: 10.1007/978-1-4939-6854-1_15.


Time-Lapse Imaging to Examine the Growth Kinetics of Arabidopsis Seedlings in Response to Ethylene.

Binder BM.

Methods Mol Biol. 2017;1573:211-222. doi: 10.1007/978-1-4939-6854-1_14.


Analysis of Ethylene Receptors: Assay for Histidine Kinase Activity.

Schaller GE, Binder BM.

Methods Mol Biol. 2017;1573:87-99. doi: 10.1007/978-1-4939-6854-1_8.


Analysis of Ethylene Receptors: Ethylene-Binding Assays.

Binder BM, Schaller GE.

Methods Mol Biol. 2017;1573:75-86. doi: 10.1007/978-1-4939-6854-1_7.


Crossing kingdoms: Using decellularized plants as perfusable tissue engineering scaffolds.

Gershlak JR, Hernandez S, Fontana G, Perreault LR, Hansen KJ, Larson SA, Binder BY, Dolivo DM, Yang T, Dominko T, Rolle MW, Weathers PJ, Medina-Bolivar F, Cramer CL, Murphy WL, Gaudette GR.

Biomaterials. 2017 May;125:13-22. doi: 10.1016/j.biomaterials.2017.02.011. Epub 2017 Feb 10.


Reshaping Plant Biology: Qualitative and Quantitative Descriptors for Plant Morphology.

Balduzzi M, Binder BM, Bucksch A, Chang C, Hong L, Iyer-Pascuzzi AS, Pradal C, Sparks EE.

Front Plant Sci. 2017 Feb 3;8:117. doi: 10.3389/fpls.2017.00117. eCollection 2017. Review.


Differential Clonal Expansion in an Invading Cell Population: Clonal Advantage or Dumb Luck?

Newgreen DF, Zhang D, Cheeseman BL, Binder BJ, Landman KA.

Cells Tissues Organs. 2017;203(2):105-113. doi: 10.1159/000452793. Epub 2017 Feb 20. Review.


Restenosis Inhibition and Re-differentiation of TGFβ/Smad3-activated Smooth Muscle Cells by Resveratrol.

Zhu Y, Takayama T, Wang B, Kent A, Zhang M, Binder BY, Urabe G, Shi Y, DiRenzo D, Goel SA, Zhou Y, Little C, Roenneburg DA, Shi XD, Li L, Murphy WL, Kent KC, Ke J, Guo LW.

Sci Rep. 2017 Feb 6;7:41916. doi: 10.1038/srep41916.


Identifying the necrotic zone boundary in tumour spheroids with pair-correlation functions.

Dini S, Binder BJ, Fischer SC, Mattheyer C, Schmitz A, Stelzer EH, Bean NG, Green JE.

J R Soc Interface. 2016 Oct;13(123). pii: 20160649.


Analysis of Network Topologies Underlying Ethylene Growth Response Kinetics.

Prescott AM, McCollough FW, Eldreth BL, Binder BM, Abel SM.

Front Plant Sci. 2016 Aug 30;7:1308. doi: 10.3389/fpls.2016.01308. eCollection 2016.


[Differential diagnosis of skin changes on the lower extremities in chronic venous insufficiency].

Binder B.

Wien Med Wochenschr. 2016 Jun;166(9-10):270-4. doi: 10.1007/s10354-016-0478-6. Epub 2016 Jul 5. Review. German.


Ethylene Regulates the Physiology of the Cyanobacterium Synechocystis sp. PCC 6803 via an Ethylene Receptor.

Lacey RF, Binder BM.

Plant Physiol. 2016 Aug;171(4):2798-809. doi: 10.1104/pp.16.00602. Epub 2016 May 31.


Quantifying the effect of experimental design choices for in vitro scratch assays.

Johnston ST, Ross JV, Binder BJ, Sean McElwain DL, Haridas P, Simpson MJ.

J Theor Biol. 2016 Jul 7;400:19-31. doi: 10.1016/j.jtbi.2016.04.012. Epub 2016 Apr 13.


Differential regulation of angiogenesis using degradable VEGF-binding microspheres.

Belair DG, Miller MJ, Wang S, Darjatmoko SR, Binder BYK, Sheibani N, Murphy WL.

Biomaterials. 2016 Jul;93:27-37. doi: 10.1016/j.biomaterials.2016.03.021. Epub 2016 Mar 16.


Increased Survival and Function of Mesenchymal Stem Cell Spheroids Entrapped in Instructive Alginate Hydrogels.

Ho SS, Murphy KC, Binder BY, Vissers CB, Leach JK.

Stem Cells Transl Med. 2016 Jun;5(6):773-81. doi: 10.5966/sctm.2015-0211. Epub 2016 Apr 7.


A bifunctional spin label reports the structural topology of phospholamban in magnetically-aligned bicelles.

McCaffrey JE, James ZM, Svensson B, Binder BP, Thomas DD.

J Magn Reson. 2016 Jan;262:50-56. doi: 10.1016/j.jmr.2015.12.005. Epub 2015 Dec 12.


Partner Abuse of Mothers Compromises Children's Behavioral Functioning Through Maternal Mental Health Dysfunction: Analysis of 300 Mother-Child Pairs.

Maddoux JA, Liu F, Symes L, McFarlane J, Paulson R, Binder BK, Fredland N, Nava A, Gilroy H.

Res Nurs Health. 2016 Apr;39(2):87-95. doi: 10.1002/nur.21708. Epub 2015 Dec 23.


Modeling the intergenerational impact of partner abuse on maternal and child function at 24 months post outreach: Implications for practice and policy.

Fredland N, McFarlane J, Symes L, Maddoux J, Pennings J, Paulson R, Binder B, Gilroy H.

Nurs Outlook. 2016 Mar-Apr;64(2):156-169. doi: 10.1016/j.outlook.2015.10.005. Epub 2015 Oct 22.


Gene-specific translation regulation mediated by the hormone-signaling molecule EIN2.

Merchante C, Brumos J, Yun J, Hu Q, Spencer KR, Enríquez P, Binder BM, Heber S, Stepanova AN, Alonso JM.

Cell. 2015 Oct 22;163(3):684-97. doi: 10.1016/j.cell.2015.09.036. Epub 2015 Oct 22.


Bifunctional Spin Labeling of Muscle Proteins: Accurate Rotational Dynamics, Orientation, and Distance by EPR.

Thompson AR, Binder BP, McCaffrey JE, Svensson B, Thomas DD.

Methods Enzymol. 2015;564:101-23. doi: 10.1016/bs.mie.2015.06.029. Epub 2015 Aug 5.


Identification of Regions in the Receiver Domain of the ETHYLENE RESPONSE1 Ethylene Receptor of Arabidopsis Important for Functional Divergence.

Bakshi A, Wilson RL, Lacey RF, Kim H, Wuppalapati SK, Binder BM.

Plant Physiol. 2015 Sep;169(1):219-32. doi: 10.1104/pp.15.00626. Epub 2015 Jul 9.


The ARGOS gene family functions in a negative feedback loop to desensitize plants to ethylene.

Rai MI, Wang X, Thibault DM, Kim HJ, Bombyk MM, Binder BM, Shakeel SN, Schaller GE.

BMC Plant Biol. 2015 Jun 24;15:157. doi: 10.1186/s12870-015-0554-x.


Spectral analysis of pair-correlation bandwidth: application to cell biology images.

Binder BJ, Simpson MJ.

R Soc Open Sci. 2015 Feb 11;2(2):140494. doi: 10.1098/rsos.140494. eCollection 2015 Feb.


High-resolution helix orientation in actin-bound myosin determined with a bifunctional spin label.

Binder BP, Cornea S, Thompson AR, Moen RJ, Thomas DD.

Proc Natl Acad Sci U S A. 2015 Jun 30;112(26):7972-7. doi: 10.1073/pnas.1500625112. Epub 2015 Jun 8.


Incomplete penetrance: The role of stochasticity in developmental cell colonization.

Binder BJ, Landman KA, Newgreen DF, Ross JV.

J Theor Biol. 2015 Sep 7;380:309-14. doi: 10.1016/j.jtbi.2015.05.028. Epub 2015 Jun 3.


Lysophosphatidic Acid and Sphingosine-1-Phosphate: A Concise Review of Biological Function and Applications for Tissue Engineering.

Binder BY, Williams PA, Silva EA, Leach JK.

Tissue Eng Part B Rev. 2015 Dec;21(6):531-42. doi: 10.1089/ten.TEB.2015.0107. Epub 2015 Jul 14. Review.


Dominant gain-of-function mutations in transmembrane domain III of ERS1 and ETR1 suggest a novel role for this domain in regulating the magnitude of ethylene response in Arabidopsis.

Deslauriers SD, Alvarez AA, Lacey RF, Binder BM, Larsen PB.

New Phytol. 2015 Oct;208(2):442-55. doi: 10.1111/nph.13466. Epub 2015 May 19.


Hepatitis B Virus-Infected HepG2hNTCP Cells Serve as a Novel Immunological Tool To Analyze the Antiviral Efficacy of CD8+ T Cells In Vitro.

Hoh A, Heeg M, Ni Y, Schuch A, Binder B, Hennecke N, Blum HE, Nassal M, Protzer U, Hofmann M, Urban S, Thimme R.

J Virol. 2015 Jul;89(14):7433-8. doi: 10.1128/JVI.00605-15. Epub 2015 May 13.


Quantifying two-dimensional filamentous and invasive growth spatial patterns in yeast colonies.

Binder BJ, Sundstrom JF, Gardner JM, Jiranek V, Oliver SG.

PLoS Comput Biol. 2015 Feb 26;11(2):e1004070. doi: 10.1371/journal.pcbi.1004070. eCollection 2015 Feb.


Delivering team training to medical home staff to impact perceptions of collaboration.

Treadwell J, Binder B, Symes L, Krepper R.

Prof Case Manag. 2015 Mar-Apr;20(2):81-8; quiz 89-90. doi: 10.1097/NCM.0000000000000066.


The simulated hospital environment: a qualitative study applying space industry techniques.

Ayers CJ, Binder BK, Lyon KC, Montgomery D, Koci A, Foster WA.

J Prof Nurs. 2015 Jan-Feb;31(1):18-25. doi: 10.1016/j.profnurs.2014.06.002. Epub 2014 Jun 12.


Protein-protein interaction and gene co-expression maps of ARFs and Aux/IAAs in Arabidopsis.

Piya S, Shrestha SK, Binder B, Stewart CN Jr, Hewezi T.

Front Plant Sci. 2014 Dec 23;5:744. doi: 10.3389/fpls.2014.00744. eCollection 2014.

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