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Items: 19

1.

A Systems-Level Characterization of the Differentiation of Human Embryonic Stem Cells into Mesenchymal Stem Cells.

Billing AM, Dib SS, Bhagwat AM, da Silva IT, Drummond RD, Hayat S, Al-Mismar R, Ben Hamidane H, Goswami N, Engholm-Keller K, Larsen MR, Suhre K, Rafii A, Graumann J.

Mol Cell Proteomics. 2019 Jul 22. pii: mcp.RA119.001356. doi: 10.1074/mcp.RA119.001356. [Epub ahead of print]

2.

Remodeling of ER-plasma membrane contact sites but not STIM1 phosphorylation inhibits Ca2+ influx in mitosis.

Yu F, Hubrack SZ, Chakraborty S, Sun L, Alcantara-Adap E, Kulkarni R, Billing AM, Graumann J, Taylor CW, Machaca K.

Proc Natl Acad Sci U S A. 2019 May 21;116(21):10392-10401. doi: 10.1073/pnas.1821399116. Epub 2019 May 7.

3.

Insights into the genetic architecture of morphological traits in two passerine bird species.

Silva CNS, McFarlane SE, Hagen IJ, Rönnegård L, Billing AM, Kvalnes T, Kemppainen P, Rønning B, Ringsby TH, Sæther BE, Qvarnström A, Ellegren H, Jensen H, Husby A.

Heredity (Edinb). 2017 Sep;119(3):197-205. doi: 10.1038/hdy.2017.29. Epub 2017 Jun 14.

4.

Controlling for P-value inflation in allele frequency change in experimental evolution and artificial selection experiments.

Kemppainen P, Rønning B, Kvalnes T, Hagen IJ, Ringsby TH, Billing AM, Pärn H, Lien S, Husby A, Saether BE, Jensen H.

Mol Ecol Resour. 2017 Jul;17(4):770-782. doi: 10.1111/1755-0998.12631. Epub 2016 Nov 25.

PMID:
27813315
5.

Complementarity of SOMAscan to LC-MS/MS and RNA-seq for quantitative profiling of human embryonic and mesenchymal stem cells.

Billing AM, Ben Hamidane H, Bhagwat AM, Cotton RJ, Dib SS, Kumar P, Hayat S, Goswami N, Suhre K, Rafii A, Graumann J.

J Proteomics. 2017 Jan 6;150:86-97. doi: 10.1016/j.jprot.2016.08.023. Epub 2016 Sep 6.

6.

Comprehensive transcriptomic and proteomic characterization of human mesenchymal stem cells reveals source specific cellular markers.

Billing AM, Ben Hamidane H, Dib SS, Cotton RJ, Bhagwat AM, Kumar P, Hayat S, Yousri NA, Goswami N, Suhre K, Rafii A, Graumann J.

Sci Rep. 2016 Feb 9;6:21507. doi: 10.1038/srep21507.

7.

SIRT1 Limits Adipocyte Hyperplasia through c-Myc Inhibition.

Abdesselem H, Madani A, Hani A, Al-Noubi M, Goswami N, Ben Hamidane H, Billing AM, Pasquier J, Bonkowski MS, Halabi N, Dalloul R, Sheriff MZ, Mesaeli N, ElRayess M, Sinclair DA, Graumann J, Mazloum NA.

J Biol Chem. 2016 Jan 29;291(5):2119-35. doi: 10.1074/jbc.M115.675645. Epub 2015 Dec 11.

8.

MetaRNA-Seq: An Interactive Tool to Browse and Annotate Metadata from RNA-Seq Studies.

Kumar P, Halama A, Hayat S, Billing AM, Gupta M, Yousri NA, Smith GM, Suhre K.

Biomed Res Int. 2015;2015:318064. doi: 10.1155/2015/318064. Epub 2015 Aug 25.

9.

Quantitative proteomic approaches in mouse: stable isotope incorporation by metabolic (SILAC) or chemical labeling (reductive dimethylation) combined with high-resolution mass spectrometry.

Billing AM, Ben Hamidane H, Graumann J.

Curr Protoc Mouse Biol. 2015 Mar 2;5(1):1-20. doi: 10.1002/9780470942390.mo140156.

PMID:
25727197
10.

Genome-wide identification and functional analysis of Apobec-1-mediated C-to-U RNA editing in mouse small intestine and liver.

Blanc V, Park E, Schaefer S, Miller M, Lin Y, Kennedy S, Billing AM, Ben Hamidane H, Graumann J, Mortazavi A, Nadeau JH, Davidson NO.

Genome Biol. 2014 Jun 19;15(6):R79. doi: 10.1186/gb-2014-15-6-r79.

11.

Proteome profiling of virus-host interactions of wild type and attenuated measles virus strains.

Billing AM, Kessler JR, Revets D, Sausy A, Schmitz S, Barra C, Muller CP.

J Proteomics. 2014 Aug 28;108:325-36. doi: 10.1016/j.jprot.2014.05.029. Epub 2014 Jun 8.

PMID:
24914991
12.

Adaptation of a commonly used, chemically defined medium for human embryonic stem cells to stable isotope labeling with amino acids in cell culture.

Liberski AR, Al-Noubi MN, Rahman ZH, Halabi NM, Dib SS, Al-Mismar R, Billing AM, Krishnankutty R, Ahmad FS, Raynaud CM, Rafii A, Engholm-Keller K, Graumann J.

J Proteome Res. 2013 Jul 5;12(7):3233-45. doi: 10.1021/pr400099j. Epub 2013 Jun 25.

13.

The easy road to genome-wide medium density SNP screening in a non-model species: development and application of a 10 K SNP-chip for the house sparrow (Passer domesticus).

Hagen IJ, Billing AM, Rønning B, Pedersen SA, Pärn H, Slate J, Jensen H.

Mol Ecol Resour. 2013 May;13(3):429-39. doi: 10.1111/1755-0998.12088. Epub 2013 Mar 9.

PMID:
23480404
14.

Membrane glucocorticoid receptor activation induces proteomic changes aligning with classical glucocorticoid effects.

Vernocchi S, Battello N, Schmitz S, Revets D, Billing AM, Turner JD, Muller CP.

Mol Cell Proteomics. 2013 Jul;12(7):1764-79. doi: 10.1074/mcp.M112.022947. Epub 2013 Jan 22.

15.

Identification of differentially expressed proteins in curcumin-treated prostate cancer cell lines.

Teiten MH, Gaigneaux A, Chateauvieux S, Billing AM, Planchon S, Fack F, Renaut J, Mack F, Muller CP, Dicato M, Diederich M.

OMICS. 2012 Jun;16(6):289-300. doi: 10.1089/omi.2011.0136. Epub 2012 Apr 4.

PMID:
22475723
16.

Evidence of inbreeding depression but not inbreeding avoidance in a natural house sparrow population.

Billing AM, Lee AM, Skjelseth S, Borg AA, Hale MC, Slate J, Pärn H, Ringsby TH, Saether BE, Jensen H.

Mol Ecol. 2012 Mar;21(6):1487-99. doi: 10.1111/j.1365-294X.2012.05490.x. Epub 2012 Feb 15.

PMID:
22335620
17.

Proteomic profiling of rapid non-genomic and concomitant genomic effects of acute restraint stress on rat thymocytes.

Billing AM, Revets D, Hoffmann C, Turner JD, Vernocchi S, Muller CP.

J Proteomics. 2012 Apr 3;75(7):2064-79. doi: 10.1016/j.jprot.2012.01.008. Epub 2012 Jan 16.

PMID:
22270012
18.

Cortisol is a potent modulator of lipopolysaccharide-induced interferon signaling in macrophages.

Billing AM, Fack F, Turner JD, Muller CP.

Innate Immun. 2011 Feb;17(3):302-20. doi: 10.1177/1753425910369269. Epub 2010 May 25.

PMID:
20501517
19.

Proteomic analysis of the cortisol-mediated stress response in THP-1 monocytes using DIGE technology.

Billing AM, Fack F, Renaut J, Olinger CM, Schote AB, Turner JD, Muller CP.

J Mass Spectrom. 2007 Nov;42(11):1433-44.

PMID:
17960574

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