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Items: 1 to 50 of 143

1.

Xylan from bambara and cowpea biomass and their structural elucidation.

Arumugam N, Biely P, Puchart V, Gerrano AS, De Mukherjee K, Singh S, Pillai S.

Int J Biol Macromol. 2019 Jul 1;132:987-993. doi: 10.1016/j.ijbiomac.2019.04.030. Epub 2019 Apr 5.

PMID:
30959129
2.

Glucuronoxylan 3-O-acetylated on uronic acid-substituted xylopyranosyl residues and its hydrolysis by GH10, GH11 and GH30 endoxylanases.

Puchart V, Mørkeberg Krogh KBR, Biely P.

Carbohydr Polym. 2019 Feb 1;205:217-224. doi: 10.1016/j.carbpol.2018.10.043. Epub 2018 Oct 16.

PMID:
30446098
3.

Structural characterization of hemicellulose released from corn cob in continuous flow type hydrothermal reactor.

Arai T, Biely P, Uhliariková I, Sato N, Makishima S, Mizuno M, Nozaki K, Kaneko S, Amano Y.

J Biosci Bioeng. 2019 Feb;127(2):222-230. doi: 10.1016/j.jbiosc.2018.07.016. Epub 2018 Aug 22.

PMID:
30143337
4.

Glucuronoyl esterases: diversity, properties and biotechnological potential. A review.

Monrad RN, Eklöf J, Krogh KBRM, Biely P.

Crit Rev Biotechnol. 2018 Nov;38(7):1121-1136. doi: 10.1080/07388551.2018.1468316. Epub 2018 May 8. Review.

PMID:
29739247
5.

Glucuronoxylan recognition by GH 30 xylanases: A study with enzyme and substrate variants.

Šuchová K, Kozmon S, Puchart V, Malovíková A, Hoff T, Mørkeberg Krogh KBR, Biely P.

Arch Biochem Biophys. 2018 Apr 2;643:42-49. doi: 10.1016/j.abb.2018.02.014. Epub 2018 Feb 22.

PMID:
29477770
6.

Action of different types of endoxylanases on eucalyptus xylan in situ.

Puchart V, Fraňová L, Mørkeberg Krogh KBR, Hoff T, Biely P.

Appl Microbiol Biotechnol. 2018 Feb;102(4):1725-1736. doi: 10.1007/s00253-017-8722-6. Epub 2018 Jan 4.

PMID:
29302718
7.

Towards enzymatic breakdown of complex plant xylan structures: State of the art.

Biely P, Singh S, Puchart V.

Biotechnol Adv. 2016 Nov 15;34(7):1260-1274. doi: 10.1016/j.biotechadv.2016.09.001. Epub 2016 Sep 9. Review.

PMID:
27620948
8.

Phylogeny, classification and metagenomic bioprospecting of microbial acetyl xylan esterases.

Adesioye FA, Makhalanyane TP, Biely P, Cowan DA.

Enzyme Microb Technol. 2016 Nov;93-94:79-91. doi: 10.1016/j.enzmictec.2016.07.001. Epub 2016 Jul 29. Review.

PMID:
27702488
9.

Microbial Glucuronoyl Esterases: 10 Years after Discovery.

Biely P.

Appl Environ Microbiol. 2016 Nov 21;82(24):7014-7018. Print 2016 Dec 15. Review.

10.

β-Glucuronidase-coupled assays of glucuronoyl esterases.

Fraňová L, Puchart V, Biely P.

Anal Biochem. 2016 Oct 1;510:114-119. doi: 10.1016/j.ab.2016.07.023. Epub 2016 Jul 22.

PMID:
27452816
11.

Comparison of fungal carbohydrate esterases of family CE16 on artificial and natural substrates.

Puchart V, Agger JW, Berrin JG, Várnai A, Westereng B, Biely P.

J Biotechnol. 2016 Sep 10;233:228-36. doi: 10.1016/j.jbiotec.2016.07.003. Epub 2016 Jul 18.

PMID:
27439201
12.

The Glycoside Hydrolase Family 8 Reducing-End Xylose-Releasing Exo-oligoxylanase Rex8A from Paenibacillus barcinonensis BP-23 Is Active on Branched Xylooligosaccharides.

Valenzuela SV, Lopez S, Biely P, Sanz-Aparicio J, Pastor FI.

Appl Environ Microbiol. 2016 Aug 15;82(17):5116-24. doi: 10.1128/AEM.01329-16. Print 2016 Sep 1.

13.

Comparison of catalytic properties of multiple β-glucosidases of Trichoderma reesei.

Guo B, Sato N, Biely P, Amano Y, Nozaki K.

Appl Microbiol Biotechnol. 2016 Jun;100(11):4959-68. doi: 10.1007/s00253-016-7342-x. Epub 2016 Feb 5.

PMID:
26846743
14.

A unique CE16 acetyl esterase from Podospora anserina active on polymeric xylan.

Puchart V, Berrin JG, Haon M, Biely P.

Appl Microbiol Biotechnol. 2015 Dec;99(24):10515-26. doi: 10.1007/s00253-015-6934-1. Epub 2015 Sep 2.

PMID:
26329850
15.

Glucuronoyl esterases are active on the polymeric substrate methyl esterified glucuronoxylan.

Biely P, Malovíková A, Uhliariková I, Li XL, Wong DW.

FEBS Lett. 2015 Aug 19;589(18):2334-9. doi: 10.1016/j.febslet.2015.07.019. Epub 2015 Jul 26.

16.

The role of the glucuronoxylan carboxyl groups in the action of endoxylanases of three glycoside hydrolase families: A study with two substrate mutants.

Biely P, Malovíková A, Hirsch J, Morkeberg Krogh KB, Ebringerová A.

Biochim Biophys Acta. 2015 Nov;1850(11):2246-55. doi: 10.1016/j.bbagen.2015.07.003. Epub 2015 Jul 11.

PMID:
26172579
17.

Redistribution of acetyl groups on the non-reducing end xylopyranosyl residues and their removal by xylan deacetylases.

Puchart V, Biely P.

Appl Microbiol Biotechnol. 2015 May;99(9):3865-73. doi: 10.1007/s00253-014-6160-2. Epub 2014 Nov 8.

PMID:
25381188
18.

Enzymatic acylation of flavonoid glycosides by a carbohydrate esterase of family 16.

Biely P, Cziszárová M, Wong KK, Fernyhough A.

Biotechnol Lett. 2014 Nov;36(11):2249-55. doi: 10.1007/s10529-014-1599-x. Epub 2014 Jul 23.

PMID:
25048225
19.

Trichoderma reesei XYN VI--a novel appendage-dependent eukaryotic glucuronoxylan hydrolase.

Biely P, Puchart V, Stringer MA, Mørkeberg Krogh KB.

FEBS J. 2014 Sep;281(17):3894-903. doi: 10.1111/febs.12925. Epub 2014 Jul 30.

20.

Trichoderma reesei CE16 acetyl esterase and its role in enzymatic degradation of acetylated hemicellulose.

Biely P, Cziszárová M, Agger JW, Li XL, Puchart V, Vršanská M, Eijsink VG, Westereng B.

Biochim Biophys Acta. 2014 Jan;1840(1):516-25. doi: 10.1016/j.bbagen.2013.10.008. Epub 2013 Oct 12.

PMID:
24128930
21.

Mode of action of acetylxylan esterases on acetyl glucuronoxylan and acetylated oligosaccharides generated by a GH10 endoxylanase.

Biely P, Cziszárová M, Uhliariková I, Agger JW, Li XL, Eijsink VG, Westereng B.

Biochim Biophys Acta. 2013 Nov;1830(11):5075-86. doi: 10.1016/j.bbagen.2013.07.018. Epub 2013 Jul 24.

PMID:
23891707
22.

Positional specifity of acetylxylan esterases on natural polysaccharide: an NMR study.

Uhliariková I, Vršanská M, McCleary BV, Biely P.

Biochim Biophys Acta. 2013 Jun;1830(6):3365-72. doi: 10.1016/j.bbagen.2013.01.011. Epub 2013 Jan 30.

PMID:
23375723
23.

Xylanase XYN IV from Trichoderma reesei showing exo- and endo-xylanase activity.

Tenkanen M, Vršanská M, Siika-aho M, Wong DW, Puchart V, Penttilä M, Saloheimo M, Biely P.

FEBS J. 2013 Jan;280(1):285-301. doi: 10.1111/febs.12069. Epub 2012 Dec 20.

24.

Functional Cloning and Expression of the Schizophyllum commune Glucuronoyl Esterase Gene and Characterization of the Recombinant Enzyme.

Wong DW, Chan VJ, McCormack AA, Hirsch J, Biely P.

Biotechnol Res Int. 2012;2012:951267. doi: 10.1155/2012/951267. Epub 2012 Jul 4.

25.

Microbial carbohydrate esterases deacetylating plant polysaccharides.

Biely P.

Biotechnol Adv. 2012 Nov-Dec;30(6):1575-88. doi: 10.1016/j.biotechadv.2012.04.010. Epub 2012 May 9. Review.

PMID:
22580218
26.

Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.

Levisson M, Han GW, Deller MC, Xu Q, Biely P, Hendriks S, Ten Eyck LF, Flensburg C, Roversi P, Miller MD, McMullan D, von Delft F, Kreusch A, Deacon AM, van der Oost J, Lesley SA, Elsliger MA, Kengen SW, Wilson IA.

Proteins. 2012 Jun;80(6):1545-59. doi: 10.1002/prot.24041. Epub 2012 Mar 13.

27.

Structural and biochemical characterization of glycoside hydrolase family 79 β-glucuronidase from Acidobacterium capsulatum.

Michikawa M, Ichinose H, Momma M, Biely P, Jongkees S, Yoshida M, Kotake T, Tsumuraya Y, Withers SG, Fujimoto Z, Kaneko S.

J Biol Chem. 2012 Apr 20;287(17):14069-77. doi: 10.1074/jbc.M112.346288. Epub 2012 Feb 24.

28.

Structure of the catalytic domain of glucuronoyl esterase Cip2 from Hypocrea jecorina.

Pokkuluri PR, Duke NE, Wood SJ, Cotta MA, Li XL, Biely P, Schiffer M.

Proteins. 2011 Aug;79(8):2588-92. doi: 10.1002/prot.23088. Epub 2011 Jun 9.

PMID:
21661060
29.

Structural basis for substrate recognition by Erwinia chrysanthemi GH30 glucuronoxylanase.

Urbániková L, Vršanská M, Mørkeberg Krogh KB, Hoff T, Biely P.

FEBS J. 2011 Jun;278(12):2105-16. doi: 10.1111/j.1742-4658.2011.08127.x. Epub 2011 May 23.

30.

Crystallization and preliminary crystallographic analysis of the glycoside hydrolase family 115 α-glucuronidase from Streptomyces pristinaespiralis.

Fujimoto Z, Ichinose H, Biely P, Kaneko S.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Jan 1;67(Pt 1):68-71. doi: 10.1107/S1744309110043721. Epub 2010 Dec 22.

31.

Action of xylan deacetylating enzymes on monoacetyl derivatives of 4-nitrophenyl glycosides of β-D-xylopyranose and α-L-arabinofuranose.

Biely P, Mastihubová M, Tenkanen M, Eyzaguirre J, Li XL, Vršanská M.

J Biotechnol. 2011 Jan 10;151(1):137-42. doi: 10.1016/j.jbiotec.2010.10.074. Epub 2010 Oct 26.

PMID:
21029756
32.

Inverting character of family GH115 α-glucuronidases.

Kolenová K, Ryabova O, Vrsanská M, Biely P.

FEBS Lett. 2010 Sep 24;584(18):4063-8. doi: 10.1016/j.febslet.2010.08.031. Epub 2010 Sep 7.

33.

Preparation of regioselectively feruloylated p-nitrophenyl alpha-L-arabinofuranosides and beta-D-xylopyranosides-convenient substrates for study of feruloyl esterase specificity.

Mastihubová M, Biely P.

Carbohydr Res. 2010 Jun 16;345(9):1094-8. doi: 10.1016/j.carres.2010.03.034. Epub 2010 Apr 8.

PMID:
20451900
34.

Carbohydrate esterases of family 2 are 6-O-deacetylases.

Topakas E, Kyriakopoulos S, Biely P, Hirsch J, Vafiadi C, Christakopoulos P.

FEBS Lett. 2010 Feb 5;584(3):543-8. doi: 10.1016/j.febslet.2009.11.095. Epub 2009 Dec 4.

35.

Fungal glucuronoyl esterases and substrate uronic acid recognition.

Duranová M, Hirsch J, Kolenová K, Biely P.

Biosci Biotechnol Biochem. 2009 Nov;73(11):2483-7. Epub 2009 Nov 7.

36.

Purification, characterization and mass spectrometric sequencing of a thermophilic glucuronoyl esterase from Sporotrichum thermophile.

Vafiadi C, Topakas E, Biely P, Christakopoulos P.

FEMS Microbiol Lett. 2009 Jun;296(2):178-84. doi: 10.1111/j.1574-6968.2009.01631.x. Epub 2009 May 18.

37.

A novel family of hemicellulolytic alpha-glucuronidase.

Ryabova O, Vrsanská M, Kaneko S, van Zyl WH, Biely P.

FEBS Lett. 2009 May 6;583(9):1457-62. doi: 10.1016/j.febslet.2009.03.057. Epub 2009 Apr 1.

38.

Cloning, expression and characterization of endo-beta-1,4-mannanase from Aspergillus fumigatus in Aspergillus sojae and Pichia pastoris.

Duruksu G, Ozturk B, Biely P, Bakir U, Ogel ZB.

Biotechnol Prog. 2009 Jan-Feb;25(1):271-6. doi: 10.1002/btpr.104.

PMID:
19205049
39.

Novel family of carbohydrate esterases, based on identification of the Hypocrea jecorina acetyl esterase gene.

Li XL, Skory CD, Cotta MA, Puchart V, Biely P.

Appl Environ Microbiol. 2008 Dec;74(24):7482-9. doi: 10.1128/AEM.00807-08. Epub 2008 Oct 31.

40.

Two glucuronoyl esterases of Phanerochaete chrysosporium.

Duranová M, Spániková S, Wösten HA, Biely P, de Vries RP.

Arch Microbiol. 2009 Feb;191(2):133-40. doi: 10.1007/s00203-008-0434-y. Epub 2008 Oct 15.

PMID:
18854978
41.

Simultaneous production of endo-beta-1,4-xylanase and branched xylooligosaccharides by Thermomyces lanuginosus.

Puchart V, Biely P.

J Biotechnol. 2008 Oct 10;137(1-4):34-43. doi: 10.1016/j.jbiotec.2008.07.1789. Epub 2008 Jul 16.

PMID:
18680769
42.

Antioxidant potential of hydroxycinnamic acid glycoside esters.

Kylli P, Nousiainen P, Biely P, Sipilä J, Tenkanen M, Heinonen M.

J Agric Food Chem. 2008 Jun 25;56(12):4797-805. doi: 10.1021/jf800317v. Epub 2008 May 22.

PMID:
18494493
43.

Crystallization and preliminary X-ray diffraction analysis of the glucuronoyl esterase catalytic domain from Hypocrea jecorina.

Wood SJ, Li XL, Cotta MA, Biely P, Duke NE, Schiffer M, Pokkuluri PR.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Apr 1;64(Pt 4):255-7. doi: 10.1107/S1744309108004594. Epub 2008 Mar 21.

44.

An alternative approach for the synthesis of fluorogenic substrates of endo-beta-(1-->4)-xylanases and some applications.

Vrsanská M, Nerinckx W, Claeyssens M, Biely P.

Carbohydr Res. 2008 Feb 25;343(3):541-8. Epub 2007 Nov 19.

PMID:
18062947
45.

Identification of genes encoding microbial glucuronoyl esterases.

Li XL, Spániková S, de Vries RP, Biely P.

FEBS Lett. 2007 Aug 21;581(21):4029-35. Epub 2007 Jul 26.

46.

Synthetic esters recognized by glucuronoyl esterase from Schizophyllum commune.

Spániková S, Poláková M, Joniak D, Hirsch J, Biely P.

Arch Microbiol. 2007 Aug;188(2):185-9. Epub 2007 Apr 18.

PMID:
17440709
47.

Mode of action of glycoside hydrolase family 5 glucuronoxylan xylanohydrolase from Erwinia chrysanthemi.

Vrsanská M, Kolenová K, Puchart V, Biely P.

FEBS J. 2007 Apr;274(7):1666-77.

48.

The vicinal hydroxyl group is prerequisite for metal activation of Clostridium thermocellum acetylxylan esterase.

Biely P, Mastihubová M, Puchart V.

Biochim Biophys Acta. 2007 Apr;1770(4):565-70. Epub 2006 Dec 21.

PMID:
17261352
49.
50.

Substrate and positional specificity of feruloyl esterases for monoferuloylated and monoacetylated 4-nitrophenyl glycosides.

Puchart V, Vrsanská M, Mastihubová M, Topakas E, Vafiadi C, Faulds CB, Tenkanen M, Christakopoulos P, Biely P.

J Biotechnol. 2007 Jan 1;127(2):235-43. Epub 2006 Jul 1.

PMID:
16901567

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