Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 136

1.

Epistemic risks in cancer screening: Implications for ethics and policy.

Biddle JB.

Stud Hist Philos Biol Biomed Sci. 2019 Aug 3:101200. doi: 10.1016/j.shpsc.2019.101200. [Epub ahead of print]

PMID:
31387780
2.

Cytosine Methylation Within Marine Sediment Microbial Communities: Potential Epigenetic Adaptation to the Environment.

Rambo IM, Marsh A, Biddle JF.

Front Microbiol. 2019 Jun 11;10:1291. doi: 10.3389/fmicb.2019.01291. eCollection 2019.

3.

An Ionic Limit to Life in the Deep Subsurface.

Payler SJ, Biddle JF, Sherwood Lollar B, Fox-Powell MG, Edwards T, Ngwenya BT, Paling SM, Cockell CS.

Front Microbiol. 2019 Mar 12;10:426. doi: 10.3389/fmicb.2019.00426. eCollection 2019.

4.

Negative reciprocity, not ordered assembly, underlies the interaction of Sox2 and Oct4 on DNA.

Biddle JW, Nguyen M, Gunawardena J.

Elife. 2019 Feb 14;8. pii: e41017. doi: 10.7554/eLife.41017.

5.

A Cross-Sectional Population Study of Geographic, Age-Specific, and Household Risk Factors for Asymptomatic Plasmodium falciparum Malaria Infection in Western Kenya.

Peprah S, Tenge C, Genga IO, Mumia M, Were PA, Kuremu RT, Wekesa WN, Sumba PO, Kinyera T, Otim I, Legason ID, Biddle J, Reynolds SJ, Talisuna AO, Biggar RJ, Bhatia K, Goedert JJ, Pfeiffer RM, Mbulaiteye SM.

Am J Trop Med Hyg. 2019 Jan;100(1):54-65. doi: 10.4269/ajtmh.18-0481.

PMID:
30457091
6.

24-h severe energy restriction impairs postprandial glycaemic control in young, lean males.

Clayton DJ, Biddle J, Maher T, Funnell MP, Sargeant JA, King JA, Hulston CJ, Stensel DJ, James LJ.

Br J Nutr. 2018 Nov;120(10):1107-1116. doi: 10.1017/S0007114518002568.

PMID:
30401004
7.

Eating with a smaller spoon decreases bite size, eating rate and ad libitum food intake in healthy young males.

James LJ, Maher T, Biddle J, Broom DR.

Br J Nutr. 2018 Oct;120(7):830-837. doi: 10.1017/S0007114518002246. Epub 2018 Aug 29.

PMID:
30153875
8.

Model discrimination for Ca2+ -dependent regulation of myosin light chain kinase in smooth muscle contraction.

Dexter JP, Biddle JW, Gunawardena J.

FEBS Lett. 2018 Aug;592(16):2811-2821. doi: 10.1002/1873-3468.13207. Epub 2018 Aug 13.

9.

Microbial extracellular enzyme activity affects performance in a full-scale modified activated sludge process.

Hassard F, Biddle J, Harnett R, Stephenson T.

Sci Total Environ. 2018 Jun 1;625:1527-1534. doi: 10.1016/j.scitotenv.2018.01.073. Epub 2018 Jan 12.

10.

Erratum: "Two-structure thermodynamics for the TIP4P/2005 model of water covering supercooled and deeply stretched regions" [J. Chem. Phys. 146, 034502 (2017)].

Biddle JW, Singh RS, Sparano EM, Ricci F, González MA, Valeriani C, Abascal JLF, Debenedetti PG, Anisimov MA, Caupin F.

J Chem Phys. 2018 Feb 14;148(6):069901. doi: 10.1063/1.5024509. No abstract available.

PMID:
29448788
11.

Discerning autotrophy, mixotrophy and heterotrophy in marine TACK archaea from the North Atlantic.

Seyler LM, McGuinness LR, Gilbert JA, Biddle JF, Gong D, Kerkhof LJ.

FEMS Microbiol Ecol. 2018 Mar 1;94(3). doi: 10.1093/femsec/fiy014.

PMID:
29390107
12.

Genome Sequences of Subcluster K5 Mycobacteriophages AlleyCat, Edugator, and Guillsminger.

King RA, Slowan-Pomeroy TM, Thomas JE, Ahmed T, Alexander KL, Biddle JM, Daniels MK, Rowlett JR, Senay TE, Rinehart CA, Staples AK, Rowland NS, Gaffney BL, Emmons CB, Hauk MD, Nguyen RL, Naegele L, Strickland SS, Briggs LA, Rush AN, Saha S, Sadana R, Cresawn SG, Russell DA, Garlena RA, Pope WH, Jacobs-Sera D, Hatfull GF.

Genome Announc. 2017 Nov 9;5(45). pii: e01122-17. doi: 10.1128/genomeA.01122-17.

13.

Decoding the architecture and origins of mechanisms for developmental polyphenism.

Projecto-Garcia J, Biddle JF, Ragsdale EJ.

Curr Opin Genet Dev. 2017 Dec;47:1-8. doi: 10.1016/j.gde.2017.07.015. Epub 2017 Aug 12. Review.

PMID:
28810163
14.

The metabolic potential of the single cell genomes obtained from the Challenger Deep, Mariana Trench within the candidate superphylum Parcubacteria (OD1).

León-Zayas R, Peoples L, Biddle JF, Podell S, Novotny M, Cameron J, Lasken RS, Bartlett DH.

Environ Microbiol. 2017 Jul;19(7):2769-2784. doi: 10.1111/1462-2920.13789. Epub 2017 Jun 22.

15.

Two-structure thermodynamics for the TIP4P/2005 model of water covering supercooled and deeply stretched regions.

Biddle JW, Singh RS, Sparano EM, Ricci F, González MA, Valeriani C, Abascal JL, Debenedetti PG, Anisimov MA, Caupin F.

J Chem Phys. 2017 Jan 21;146(3):034502. doi: 10.1063/1.4973546. Erratum in: J Chem Phys. 2018 Feb 14;148(6):069901.

16.

Using directed evolution to improve hydrogen production in chimeric hydrogenases from Clostridia species.

Plummer SM, Plummer MA, Merkel PA, Hagen M, Biddle JF, Waidner LA.

Enzyme Microb Technol. 2016 Nov;93-94:132-141. doi: 10.1016/j.enzmictec.2016.07.011. Epub 2016 Aug 6.

PMID:
27702473
17.

Deep Subsurface Life from North Pond: Enrichment, Isolation, Characterization and Genomes of Heterotrophic Bacteria.

Russell JA, León-Zayas R, Wrighton K, Biddle JF.

Front Microbiol. 2016 May 10;7:678. doi: 10.3389/fmicb.2016.00678. eCollection 2016.

18.

Two-state thermodynamics and the possibility of a liquid-liquid phase transition in supercooled TIP4P/2005 water.

Singh RS, Biddle JW, Debenedetti PG, Anisimov MA.

J Chem Phys. 2016 Apr 14;144(14):144504. doi: 10.1063/1.4944986.

PMID:
27083735
19.

Transcriptional analysis of sulfate reducing and chemolithoautotrophic sulfur oxidizing bacteria in the deep subseafloor.

Orsi WD, Barker Jørgensen B, Biddle JF.

Environ Microbiol Rep. 2016 Aug;8(4):452-60. doi: 10.1111/1758-2229.12387. Epub 2016 Apr 8.

PMID:
26991974
20.

The Guaymas Basin Hiking Guide to Hydrothermal Mounds, Chimneys, and Microbial Mats: Complex Seafloor Expressions of Subsurface Hydrothermal Circulation.

Teske A, de Beer D, McKay LJ, Tivey MK, Biddle JF, Hoer D, Lloyd KG, Lever MA, Røy H, Albert DB, Mendlovitz HP, MacGregor BJ.

Front Microbiol. 2016 Feb 18;7:75. doi: 10.3389/fmicb.2016.00075. eCollection 2016.

21.

Microbial Communities in Methane- and Short Chain Alkane-Rich Hydrothermal Sediments of Guaymas Basin.

Dowell F, Cardman Z, Dasarathy S, Kellermann MY, Lipp JS, Ruff SE, Biddle JF, McKay LJ, MacGregor BJ, Lloyd KG, Albert DB, Mendlovitz H, Hinrichs KU, Teske A.

Front Microbiol. 2016 Jan 29;7:17. doi: 10.3389/fmicb.2016.00017. eCollection 2016.

22.

Cultivation-dependent and cultivation-independent characterization of hydrocarbon-degrading bacteria in Guaymas Basin sediments.

Gutierrez T, Biddle JF, Teske A, Aitken MD.

Front Microbiol. 2015 Jul 7;6:695. doi: 10.3389/fmicb.2015.00695. eCollection 2015.

23.

Global dispersion and local diversification of the methane seep microbiome.

Ruff SE, Biddle JF, Teske AP, Knittel K, Boetius A, Ramette A.

Proc Natl Acad Sci U S A. 2015 Mar 31;112(13):4015-20. doi: 10.1073/pnas.1421865112. Epub 2015 Mar 16.

24.

Burkitt lymphoma research in East Africa: highlights from the 9(th) African organization for research and training in cancer conference held in Durban, South Africa in 2013.

Simbiri KO, Biddle J, Kinyera T, Were PA, Tenge C, Kawira E, Masalu N, Sumba PO, Lawler-Heavner J, Stefan CD, Buonaguro FM, Robinson D, Newton R, Harford J, Bhatia K, Mbulaiteye SM.

Infect Agent Cancer. 2014 Sep 11;9:32. doi: 10.1186/1750-9378-9-32. eCollection 2014.

25.

Detection and classification of live and dead Escherichia coli by laser-induced breakdown spectroscopy.

Sivakumar P, Fernández-Bravo A, Taleh L, Biddle JF, Melikechi N.

Astrobiology. 2015 Feb;15(2):144-53. doi: 10.1089/ast.2014.1181.

26.

Environmental controls on intragroup diversity of the uncultured benthic archaea of the miscellaneous Crenarchaeotal group lineage naturally enriched in anoxic sediments of the White Oak River estuary (North Carolina, USA).

Lazar CS, Biddle JF, Meador TB, Blair N, Hinrichs KU, Teske AP.

Environ Microbiol. 2015 Jul;17(7):2228-38. doi: 10.1111/1462-2920.12659. Epub 2015 Jan 30.

PMID:
25331558
27.

Trends and future challenges in sampling the deep terrestrial biosphere.

Wilkins MJ, Daly RA, Mouser PJ, Trexler R, Sharma S, Cole DR, Wrighton KC, Biddle JF, Denis EH, Fredrickson JK, Kieft TL, Onstott TC, Peterson L, Pfiffner SM, Phelps TJ, Schrenk MO.

Front Microbiol. 2014 Sep 12;5:481. doi: 10.3389/fmicb.2014.00481. eCollection 2014.

28.

Behavior of supercooled aqueous solutions stemming from hidden liquid-liquid transition in water.

Biddle JW, Holten V, Anisimov MA.

J Chem Phys. 2014 Aug 21;141(7):074504. doi: 10.1063/1.4892972.

PMID:
25149798
29.

Goal specificity: a proxy measure for improvements in environmental outcomes in collaborative governance.

Biddle JC, Koontz TM.

J Environ Manage. 2014 Dec 1;145:268-76. doi: 10.1016/j.jenvman.2014.06.029. Epub 2014 Aug 2.

PMID:
25083592
30.
31.

Phylogenetic diversity of a microbialite reef in a cold alkaline freshwater lake.

Chan OW, Bugler-Lacap DC, Biddle JF, Lim DS, McKay CP, Pointing SB.

Can J Microbiol. 2014 Jun;60(6):391-8. doi: 10.1139/cjm-2014-0024. Epub 2014 Apr 29.

PMID:
24861562
32.

Performance of permeable media rotating reactors used for pretreatment of wastewaters.

Hassard F, Cartmell E, Biddle J, Stephenson T.

Water Sci Technol. 2014;69(9):1926-31. doi: 10.2166/wst.2014.105.

PMID:
24804669
33.

Communication: minimum in the thermal conductivity of supercooled water: a computer simulation study.

Bresme F, Biddle JW, Sengers JV, Anisimov MA.

J Chem Phys. 2014 Apr 28;140(16):161104. doi: 10.1063/1.4873167.

PMID:
24784243
34.

Prokaryote populations of extant microbialites along a depth gradient in Pavilion Lake, British Columbia, Canada.

Russell JA, Brady AL, Cardman Z, Slater GF, Lim DS, Biddle JF.

Geobiology. 2014 May;12(3):250-64. doi: 10.1111/gbi.12082. Epub 2014 Mar 17.

PMID:
24636451
35.
36.

Horizontal gene transfer and the rock record: comparative genomics of phylogenetically distant bacteria that induce wrinkle structure formation in modern sediments.

Flood BE, Bailey JV, Biddle JF.

Geobiology. 2014 Mar;12(2):119-32. doi: 10.1111/gbi.12072. Epub 2014 Jan 2.

PMID:
24382125
37.

Follow-up imaging for vertebral osteomyelitis: a teachable moment.

Visconti AJ, Biddle J, Solomon M.

JAMA Intern Med. 2014 Feb 1;174(2):184. doi: 10.1001/jamainternmed.2013.12742. No abstract available.

38.

Sulfide oxidation, nitrate respiration, carbon acquisition, and electron transport pathways suggested by the draft genome of a single orange Guaymas Basin Beggiatoa (Cand. Maribeggiatoa) sp. filament.

MacGregor BJ, Biddle JF, Harbort C, Matthysse AG, Teske A.

Mar Genomics. 2013 Sep;11:53-65. doi: 10.1016/j.margen.2013.08.001. Epub 2013 Sep 3.

PMID:
24012537
39.

Microbial activity in the marine deep biosphere: progress and prospects.

Orcutt BN, Larowe DE, Biddle JF, Colwell FS, Glazer BT, Reese BK, Kirkpatrick JB, Lapham LL, Mills HJ, Sylvan JB, Wankel SD, Wheat CG.

Front Microbiol. 2013 Jul 11;4:189. doi: 10.3389/fmicb.2013.00189. eCollection 2013.

40.

Gene expression in the deep biosphere.

Orsi WD, Edgcomb VP, Christman GD, Biddle JF.

Nature. 2013 Jul 11;499(7457):205-8. doi: 10.1038/nature12230. Epub 2013 Jun 12.

PMID:
23760485
41.

Deep subsurface microbiology: a guide to the research topic papers.

Teske A, Biddle JF, Edgcomb VP, Schippers A.

Front Microbiol. 2013 May 16;4:122. doi: 10.3389/fmicb.2013.00122. eCollection 2013. No abstract available.

42.

Thermal conductivity of supercooled water.

Biddle JW, Holten V, Sengers JV, Anisimov MA.

Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Apr;87(4):042302. Epub 2013 Apr 11.

PMID:
23679409
43.

Mobile elements in a single-filament orange Guaymas Basin Beggiatoa ("Candidatus Maribeggiatoa") sp. draft genome: evidence for genetic exchange with cyanobacteria.

MacGregor BJ, Biddle JF, Teske A.

Appl Environ Microbiol. 2013 Jul;79(13):3974-85. doi: 10.1128/AEM.03821-12. Epub 2013 Apr 19.

44.

Deep sequencing of subseafloor eukaryotic rRNA reveals active Fungi across marine subsurface provinces.

Orsi W, Biddle JF, Edgcomb V.

PLoS One. 2013;8(2):e56335. doi: 10.1371/journal.pone.0056335. Epub 2013 Feb 13.

45.

Microbial eukaryotes: extending observations north.

Biddle JF.

Front Microbiol. 2013 Feb 5;4:10. doi: 10.3389/fmicb.2013.00010. eCollection 2013. No abstract available.

46.

Why orange Guaymas Basin Beggiatoa spp. are orange: single-filament-genome-enabled identification of an abundant octaheme cytochrome with hydroxylamine oxidase, hydrazine oxidase, and nitrite reductase activities.

MacGregor BJ, Biddle JF, Siebert JR, Staunton E, Hegg EL, Matthysse AG, Teske A.

Appl Environ Microbiol. 2013 Feb;79(4):1183-90. doi: 10.1128/AEM.02538-12. Epub 2012 Dec 7.

47.

Chronic stress elevates telomerase activity in rats.

Beery AK, Lin J, Biddle JS, Francis DD, Blackburn EH, Epel ES.

Biol Lett. 2012 Dec 23;8(6):1063-6. doi: 10.1098/rsbl.2012.0747. Epub 2012 Oct 10.

48.
49.

Novel Degenerate PCR Method for Whole-Genome Amplification Applied to Peru Margin (ODP Leg 201) Subsurface Samples.

Martino AJ, Rhodes ME, Biddle JF, Brandt LD, Tomsho LP, House CH.

Front Microbiol. 2012 Jan 23;3:17. doi: 10.3389/fmicb.2012.00017. eCollection 2012.

50.

Prospects for the study of evolution in the deep biosphere.

Biddle JF, Sylvan JB, Brazelton WJ, Tully BJ, Edwards KJ, Moyer CL, Heidelberg JF, Nelson WC.

Front Microbiol. 2012 Jan 24;2:285. doi: 10.3389/fmicb.2011.00285. eCollection 2011.

Supplemental Content

Loading ...
Support Center